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EASE-DGGS:a hybrid discrete global grid system for Earth sciences

Big Earth Data 2022年第3期6卷 340-357页

作者： Jeffery A.thompson Mary J.Brodzik kevin a.t.silverstein Mason A.Hurley Nathan L.Carlson Minnesota Supercomputing Institute University of MinnesotaMinneapolisMNUSA GEMS Informatics Initiative University of MinnesotaMinneapolisMNUSA National Snow and Ice Data Center Cooperative Institute for Research in Environmental SciencesUniversity of ColoradoBoulderCOUSA

Although we live in an era of unprecedented quantities and access to data,deriving actionable information from raw data is a hard *** observation systems(EOS)have experienced rapid growth and uptake in recent decades,and the rate at which we obtain remotely sensed images is *** significant effort and attention has been devoted to designing systems that deliver analytics ready imagery faster,less attention has been devoted to developing analytical frameworks that enable EOS to be seamlessly integrated with other data for quantitative *** global grid systems(DGGS)have been proposed as one potential solution that addresses the challenge of geospatial data integration and ***,we propose the systematic extension of EASE-Grid in order to provide DGGS-like characteristics for EOS data *** describe the extensions as well as present implementation as an application programming interface(API),which forms part of the University of Minnesota’s GEMS(Genetic x Environment x Management x Socioeconomic)Informatics Center’s API portfolio.

关键词： Discrete global grid systems DGGS EASE Grid coordinate reference systems

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the use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry

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Horticulture Research 2021年第1期8卷 2785-2797页

作者： Nicholas P.Howard Cameron Peace kevin a.t.silverstein Ana Poets James J.Luby Stijn Vanderzande Charles-Eric Durel Helene Muranty Caroline Denance Eric van de Weg Institut fur Biologie und Umweltwissenschaften Carl von Ossietzky UniversityOldenburgGermany Department of Horticultural Science University of MinnesotaSt.PaulMNUSA Department of Horticulture and Landscape Architecture Washington State UniversityPullmanWashingtonWAUSA Minnesota Supercomputing Institute University of MinnesotaMinneapolisMNUSA Universited’Angers Institut AgroINRAEIRHSSFR 4207 QuaSaVBeaucouzeFrance Plant Breeding Wageningen University and ResearchWageningenThe Netherlands

Pedigree information is of fundamental importance in breeding programs and related genetics ***,many individuals have unknown *** methods to identify and confirm direct parent–offspring relationships are routine,those for other types of close relationships have yet to be effectively and widely implemented with plants,due to complications such as asexual propagation and extensive *** objective of this study was to develop and demonstrate methods that support complex pedigree reconstruction via the total length of identical by state haplotypes(referred to in this study as“summed potential lengths of shared haplotypes”,SPLoSH).A custom Python script,HapShared,was developed to generate SPLoSH data in apple and sweet *** was used to establish empirical distributions of SPLoSH data for known relationships in these *** distributions were then used to estimate previously unknown *** studies in each crop demonstrated various pedigree reconstruction scenarios using SPLoSH *** cherry,a full-sib relationship was deduced for‘Emperor Francis,and‘Schmidt’,a half-sib relationship for‘Van’and‘Windsor’,and the paternal grandparents of‘Stella’were *** apple,29 cultivars were found to share an unknown parent,the pedigree of the unknown parent of‘Cox’s Pomona’was reconstructed,and‘Fameuse’was deduced to be a likely grandparent of‘McIntosh’.Key genetic resources that enabled this empirical study were large genome-wide SNP array datasets,integrated genetic maps,and previously identified pedigree *** with similar resources are also expected to benefit from using HapShared for empowering pedigree reconstruction.

关键词： Python breeding crops

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ON DONSKER AND VARADHAN'S ASYMPtOtIC EVALUAtION WItHOUt COMPACtNESS

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Acta Mathematicae Applicatae Sinica 1984年第1期1卷 17-25页

作者：钱敏平,M.L.silverstein Beijing University Washington University St.Louis U.S.A.

Donsker and Varadhan have developed in a series of papers [1—3] a newtechnique to estimate the rate of exponential decay for certain probabilities associatedwith occupation times for Markov *** wish to investigate to what extentthe compactness condition is actually *** a first step,we consider here thefollowing *** X be a metric space and let dx be a measure on *** C（X）be the space ofbounded continuous functions on X and p_t be a strongly continuous semigroup such

关键词： th ON DONSKER AND VARADHAN’S ASYMPtOtIC EVALUAtION WItHOUt COMPACtNESS

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Performance and calibration of quark/gluon-jet taggers using 140 fb^(-1) of pp collisions at √s=13 teV with the AtLAS detector

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Chinese Physics C 2024年第2期48卷 1-25页

作者： G. Aad B. Abbott K. Abeling N.J. Abicht S.H. Abidi A. Aboulhorma H. Abramowicz H. Abreu Y. Abulaiti B.S. Acharya C. Adam Bourdarios L. Adamczyk S.V. Addepalli M.J. Addison J. Adelman A. Adiguzel t. Adye A.A. Affolder Y. Afik M.N. Agaras J. Agarwala A. Aggarwal C. Agheorghiesei A. Ahmad F. Ahmadov W.S. Ahmed S. Ahuja X. Ai G. Aielli A. Aikot M. Ait tamlihat B. Aitbenchikh I. Aizenberg M. Akbiyik t.P.A. Åkesson A.V. Akimov D. Akiyama N.N. Akolkar K. Al Khoury G.L. Alberghi J. Albert P. Albicocco G.L. Albouy S. Alderweireldt M. Aleksa I.N. Aleksandrov C. Alexa t. Alexopoulos F. Alfonsi M. Algren M. Alhroob B. Ali H.M.J. Ali S. Ali S.W. Alibocus M. Aliev G. Alimonti W. Alkakhi C. Allaire B.M.M. Allbrooke J.F. Allen C.A. Allendes Flores P.P. Allport A. Aloisio F. Alonso C. Alpigiani M. Alvarez Estevez A. Alvarez Fernandez M. Alves Cardoso M.G. Alviggi M. Aly Y. Amaral Coutinho A. Ambler C. Amelung M. Amerl C.G. Ames D. Amidei S.P. Amor Dos Santos K.R. Amos V. Ananiev C. Anastopoulos t. Andeen J.K. Anders S.Y. Andrean A. Andreazza S. Angelidakis A. Angerami A.V. Anisenkov A. Annovi C. Antel M.t. Anthony E. Antipov M. Antonelli F. Anulli M. Aoki t. Aoki J.A. Aparisi Pozo M.A. Aparo L. Aperio Bella C. Appelt A. Apyan N. Aranzabal S.J. Arbiol Val C. Arcangeletti A.t.H. Arce E. Arena J-F. Arguin S. Argyropoulos J.-H. Arling O. Arnaez H. Arnold G. Artoni H. Asada K. Asai S. Asai N.A. Asbah J. Assahsah K. Assamagan R. Astalos S. Atashi R.J. Atkin M. Atkinson H. Atmani P.A. Atmasiddha K. Augsten S. Auricchio A.D. Auriol V.A. Austrup G. Avolio K. Axiotis G. Azuelos D. Babal H. Bachacou K. Bachas A. Bachiu F. Backman A. Badea P. Bagnaia M. Bahmani A.J. Bailey V.R. Bailey J.t. Baines L. Baines O.K. Baker E. Bakos D. Bakshi Gupta V. Balakrishnan R. Balasubramanian E.M. Baldin P. Balek E. Ballabene F. Balli L.M. Baltes W.K. Balunas J. Balz E. Banas M. Bandieramonte A. Bandyopadhyay S. Bansal L. Barak M. Barakat E.L. Barberio D. Barberis M. Barbero M.Z. Barel K.N. Barends t. Barillari M-S. Barisits t. Barklow P. Baron D.A. Baron Mo the AtLAS Collaboration

the identification of jets originating from quarks and gluons,often referred to as quark/gluon tagging,plays an important role in various analyses performed at the Large Hadron Collider,as Standard Model measurements and searches for new particles decaying to quarks often rely on suppressing a large gluon-induced *** paper describes the measurement of the efficiencies of quark/gluon taggers developed within the AtLAS Collaboration,using √s=13 teV proton–proton collision data with an integrated luminosity of 140 fb^(-1) collected by the AtLAS *** taggers with high performances in rejecting jets from gluon over jets from quarks are studied:one tagger is based on requirements on the number of inner-detector tracks associated with the jet,and the other combines several jet substructure observables using a boosted decision tree.A method is established to determine the quark/gluon fraction in data,by using quark/gluon-enriched subsamples defined by the jet *** in tagging efficiency between data and simulation are provided for jets with transverse momentum between 500 GeV and 2 teV and for multiple tagger working points.

关键词： AtLAS JEt QUARK GLUON tAGGING

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