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Depiction of secondary metabolites and antifungal activity of Bacillus velezensis DTU001

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Synthetic and Systems Biotechnology 2019年第3期4卷 142-149页

作者： Sagarika Devi Heiko T.Kiesewalter Renato Kovacs jens christian frisvad Tilmann Weber Thomas Ostenfeld Larsen Akos T.Kovacs Ling Ding Department of Biotechnology and Biomedicine Technical University of Denmark2800Kgs LyngbyDenmark Department of Medical Microbiology Faculty of MedicineUniversity of Debrecen4032DebrecenHungary Center for Biosustainability Technical University of Denmark2800Kgs LyngbyDenmark

For a safe and sustainable environment,effective microbes as biocontrol agents are in high *** have isolated a new Bacillus velezensis strain DTU001,investigated its antifungal spectrum,sequenced its genome,and uncovered the production of lipopeptides in HPLC-HRMS *** test the antifungal efficacy,extracts of *** DTU001 was tested against a range of twenty human or plant pathogenic *** demonstrate that inhibitory potential of *** DTU001 against selected fungi is superior in comparison to single lipopeptide,either iturin or *** isolate showed analogous biofilm formation to other closely related *** further support the biocontrol properties of the isolate,coculture with Candida albicans demonstrated that *** DTU001 exhibited excellent antiproliferation effect against *** summary,the described isolate is a potential antifungal agent with a broad antifungal spectrum that might assist our aims to avoid hazardous pathogenic fungi and provide alternative to toxicity caused by chemicals.

关键词： Bacillus velezensis Candida albicans Secondary metabolites Biocontrol Biofilm

Wear dependent virtual flow rate sensor for progressing cavity pumps with deformable stator

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Petroleum Science 2024年第2期21卷 1346-1353页

作者： jens Müller Sebastian Leonow Johannes Schulz christian Hansen Martin Monnigmann Ruhr-Universitat Bochum Universit atsstraûe 150Bochum44801Germany SEEPEX GmbH Scharnh olzstraûe 344Bottrop46240Germany

This contribution presents a novel wear dependent virtual flow rate sensor for single stage single lobe progressing cavity pumps. We study the wear-induced material loss of the pump components and the impact of this material loss on the volumetric efficiency. The results are combined with an established backflow model to implement a backflow calculation procedure that is adaptive to wear. We use a laboratory test setup with a highly abrasive fluid and operate a pump from new to worn condition to validate our approach. The obtained measurement data show that the presented virtual sensor is capable of calculating the flow rate of a pump being subject to wear during its regular operation.

关键词： Backflow Progressing cavity pump Virtual sensor Wear

Small mammal community composition impacts bank vole (Clethrionomys glareolus) population dynamics and associated seroprevalence of Puumala orthohantavirus

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Integrative Zoology 2024年第1期19卷 52-65页

作者： Felicitas Maria BUJNOCH Daniela REIL Stephan DREWES Ulrike MROSENFELD Rainer G.ULRICH jens JACOB christian IMHOLT Julius Kühn-Institute Federal Research Centre for Cultivated PlantsInstitute for Epidemiology and Pathogen DiagnosticsRodent ResearchMünsterGermany University of Münster Institute for Evolution and BiodiversityMünsterGermany Friedrich-Loeffler-Institut Federal Research Institute for Animal HealthInstitute of Novel and Emerging Infectious DiseasesGreifswald-Insel RiemsGermany

Rodents are important reservoirs for zoonotic pathogens that cause diseases in *** is hypoth-esized to be closely related to pathogen prevalence through multiple direct and indirect *** example,the presence of non-host species can reduce contact rates of the main reservoir host and thus reduce the risk of transmission(“dilution effect”).In addition,an overlap in ecological niches between two species could lead to increased interspecific competition,potentially limiting host densities and reducing density-dependent pathogen transmission *** this study,we investigated the relative impact of population-level regulation of direct and indirect drivers of the prevalence of Puumala orthohantavirus(PUUV)in bank voles(Clethrionomys glareolus)during years with high *** compiled data on small mammal community composition from four regions in Germany between 2010 and *** equation modeling revealed a strong seasonality in PUUV control mechanisms in bank *** abundance of shrews tended to have a negative relationship with host abundance,and host abundance positively influenced PUUV seroprevalence,while at the same time increasing the abundance of competing non-hosts like the wood mouse(Apodemus sylvaticus)and the yellow-neckedfield mouse(Apodemusflavicollis)were associated with reduced PUUV seroprevalence in the *** results indicate that for PUUV in bank voles,dilution is associated with increased interspecific *** pressures leading to the decline of Apodemus *** a specific habitat could lead to the amplification of mechanisms promoting PUUV transmission within the host populations.

关键词： bank vole biodiversity Puumala orthohantavirus small mammals

Ethyl-iophenoxic acid as a quantitative bait marker for small mammals

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Integrative Zoology 2022年第6期17卷 981-990页

作者： Kyra JACOBLINNERT christian IMHOLT Detlef SCHENKE jens JACOB Julius Kühn Institute(JKI) Federal Research Centre for Cultivated PlantsInstitute for Plant Protection in Horticulture and ForestsVertebrate ResearchMünsterGermany Department of Behavioral Biology University of OsnabrückOsnabrückGermany Julius Kühn Institute(JKI) Federal Research Centre for Cultivated PlantsInstitute for Ecological ChemistryPlant Analysis and Stored Product ProtectionBerlinGermany

Bait markers are indispensable for ecological research but in small mammals,most markers are invasive,expensive and do not enable quantitative analyses of ***-iophenoxic acid(Et-IPA)is a non-toxic,quantitative bait marker,which has been used for studying bait uptake in several carnivores and *** developed a bait with Et-IPA,assessed its palatability to common voles(Microtus arvalis),and determined the dose-residue-relation for this important agricultural pest rodent ***-IPA concentrations of 40 to 1280μg Et-IPA per g bait were applied to wheat using sunﬂower oil or polyethylene glycol 300 as potential *** a laboratory study,common voles were offered the bait and blood samples were collected 1,7,and 14 days after *** samples were analyzed with LC-ESI-MS/MS for blood residues of ***ﬂower-oil was the most suitable bait ***-IPA seemed to be palatable to common voles at all test ***-dependent residues could be detected in blood samples in a dose-dependent manner and up to 14 days after uptake enabling generation of a calibration curve of the dose-residue ***-IPA was present in common vole blood for at least 14 days,but there was dissipation by 33–37%depending on ***-IPA meets many criteria for an“ideal”quantitative bait marker for use in futureﬁeld studies on common voles and possibly other small mammal species.

关键词： baiting biomarker Microtus arvalis quantitative bait marker small mammals

Emerging reconfigurable electronic devices based on two-dimensional materials:A review

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InfoMat 2022年第10期4卷 38-61页

作者： Wenwen Fei jens Trommer Max christian Lemme Thomas Mikolajick AndréHeinzig Chair of Nanoelectronics TU DresdenDresdenGermany Center for Advancing Electronics Dresden(CFAED) TU DresdenDresdenGermany NaMLAb gGmbH DresdenGermany Chair of Electronic Devices RWTH Aachen UniversityAachenGermany Advanced Microelectronics Center Aachen AMO GmbHAachenGermany

As the dimensions of the transistor,the key element of silicon technology,are approaching their physical limits,developing semiconductor technology with novel concepts and materials has been the main focus of scientific research and *** recent years,emerging reconfigurable technologies that offer device-level run-time reconfigurability have been explored and shown the potential to enhance device and circuit ***-dimensional(2D)materials possess exquisite electronic properties and provide a suitable platform for reconfigurable technology owing to their atomic-thin thickness and high sensitivity to external electrical *** this review,we present an intensive survey of 2D-material-based devices with diverse reconfigurability,including carrier polarity,threshold voltage control,as well as multifunctional configurations enabled by 2D *** discuss the working principles for these devices in detail and highlight the important figures of merit for performance *** further provide a forward-looking perspective on the opportunities and challenges of these reconfigurable devices based on 2D materials in the field of computing technologies.

关键词： 2D materials electronic devices multifunction reconfigurable

Development of fungal cell factories for the production of secondary metabolites:Linking genomics and metabolism

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Synthetic and Systems Biotechnology 2017年第1期2卷 5-12页

作者： jens christian Nielsen jens Nielsen Chalmers University of Technology Kemivagen 10Sweden

The genomic era has revolutionized research on secondary metabolites and bioinformatics methods have in recent years revived the antibiotic discovery process after decades with only few new active molecules being *** computational tools are driven by genomics and metabolomics analysis,and enables rapid identification of novel secondary *** translate this increased discovery rate into industrial exploitation,it is necessary to integrate secondary metabolite pathways in the metabolic engineering *** this review,we will describe the novel advances in discovery of secondary metabolites produced by filamentous fungi,highlight the utilization of genome-scale metabolic models(GEMs)in the design of fungal cell factories for the production of secondary metabolites and review strategies for optimizing secondary metabolite production through the construction of high yielding platform cell factories.

关键词： Secondary metabolism Fungi Biosynthetic gene clusters Genome mining Metabolic modeling Cell factories

Bistability theorem in a cancer model

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International Journal of Biomathematics 2018年第1期11卷 61-98页

作者： jens christian Larsen Vanlcse Alle 50 2. mr. tv2720 VanlCse Copenhagen Denmark

In this paper, I continue the study of the mathematical models presented in [J. C. Larsen, Models of cancer growth, J. Appl. Math. Comput. 53 (1–2) (2015) 613–645] and [J. C. Larsen, The bistability theorem in a model of metastatic cancer, to appear in Appl. Math. ]. I shall prove the bistability theorem for the ODE model from [Larsen, 2015]. It is a mass action kinetic system in the variables C cancer, GF growth factor and GI growth inhibitor. This theorem says that for some values of the parameters, there exist two positive singular points c ∗ + = ( C ∗ + , GF ∗ , GI ∗ + ) , c ∗ − = ( C ∗ − , GF ∗ , GI ∗ − ) of the vector field. Here C ∗ − < C ∗ + and c ∗ − is stable and c ∗ + is unstable, see Sec. 2. There is also a discrete model in [Larsen, 2015], it is a linear map ( T ) on three-dimensional Euclidean vector space with variables ( C , GF , GI ) , where these variables have the same meaning as in the ODE model above. In [Larsen, 2015], I showed that one can sometimes find affine vector fields on three-dimensional Euclidean vector space whose time one map is T . I shall also show this in the present paper in a more general setting than in [Larsen, 2015]. This enables me to find an expression for the rate of change of cancer growth on the coordinate hyperplane C = 0 in Euclidean vector space. I also present an ODE model of cancer metastasis with variables C , C M , GF , GI , where C is primary cancer and C M is metastatic cancer and GF, GI are growth factors and growth inhibitors, respectively.

关键词：数学模型癌症定理欧几里德几何学生长因素向量空间运动系统分离模型

Deep hyperammonemic hepatic encephalopathy precipitated by fecal microbiota transplantation for fulminant Clostridioides difficile infection

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Gastroenterology Report 2022年第1期10卷 612-614页

作者： Lotte Lindgreen Eriksen Simon Mark Dahl Baunwall Peter Lykke Eriksen Kirstine Petrea Bak-Fredslund jens Erik Nielsen jens Frederik Dahlerup Karen Louise Thomsen Hendrik Vilstrup christian Lodberg Hvas Department of Hepatology and Gastroenterology Aarhus University HospitalAarhus NDenmark Department of Hepatology and Gastroenterology Randers Regional HospitalRandersDenmark Department of Radiology Aarhus University HospitalAarhus NDenmark

Introduction Fecal microbiota transplantation(FMT)is highly effective and potentially life-saving for recurrent Clostridioides difficile infection(CDI)[1].Recent pilot trials also reported the use of FMT to revert hepatic encephalopathy(HE)in patients with decompensated liver cirrhosis without infectious colitis[2,3].Intestinal microbiota-driven hyperammonemia is central to HE development and most treatments aim to reduce ammonia levels by modulating the intestinal ***,FMT might lead to increased intestinal ammonia production,as we describe here.

关键词： hepatic infection encephalopathy

Is serine racemase(SRR) a second hit target for LRRK2-G2019S induced Parkinson's disease?

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Neural Regeneration Research 2021年第3期16卷 498-499页

作者： Sarah Louise Nickels jens christian Schwamborn Luxembourg Centre for Systems Biomedicine(LCSB) University of LuxembourgBelvauxLuxembourg Riken Institute for Medical Sciences(IMS) KanagawaJapan

To date,at least 7 million people are suffering from Parkinson's disease(PD)worldwide,which is the second most prevalent,age-associated,and progressive neurodegenerative disorder(Tysnes and Storstein,2017).Given the accelerated global pace of aging,it becomes of fundamental importance that we start understanding the origins of neurodegeneration in order to develop effective disease modifying *** PD patients suffer from a combination of motor and nonmotor disabilities.

关键词： second patients suffering