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Identification of novel SINEs from Cyprinidae and their evolutionary significance

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Progress in Natural Science:Materials International 2007年第3期17卷 270-279页

作者： HAN Yawei, HE Slumping and CHEN Yiyu ( Institute of Hydrobiology, chinese academy of sciences, Wuhan 430072, china. graduate School, chinese academy of sciences, beijing 100039, china) [a]Institute of Hydrobiology Chinese Academy of Sciences Wuhan China [b]graduate School Chinese Academy of Sciences Beijing China

Short interspersed nuclear elements (SINEs) are widespread among eukaryotic genomes. They are repetitive DNA sequences that have been amplified by retrotransposition. In this study, a class of SINEs were isolated from the Opsariichthys bidens genome, and named Opsar. Sequence analysis confirmed that Opsar is a new class of typical SINEs derived from tRNA molecules. With the tRNA-derived region of Opsar and through BLASTN search, we further identified Zb-SINEs from the zebrafish genome, which includes two groups: Zb-SINE-A and Zb-SINE-B. The Zb-SINE-A. group comprises subfamilies of -Al--A5, and the Zb-SINE-B group is a dimer of the tRNA -derived region and shares a similar dimeric composition to Alu. Zb-SINEs are composed of three distinct regions: a 5’ end tRNA-derived region, a tRNA-unrelated region and a 3’ end AT-rich region. The flanking regions are AT rich. The average length of Zb-SINEs elements is about 340 bp. Zb-SINEs account for as much as 0.1 % of the whole zebrafish genome. About 70% of the Zb-SINEs are on chromosomes 11, 18, and 19. These Zb-SINEs were characterized by PCR and dot hybridization. The distribution pattern of Zb-SINEs in genome strongly supports the master genes model. The tRNA-derived regions of Opsar and Zb-SINEs were compared with the tRNAAla gene, and they showed 76% similarity, indicating that Opsar and Zb-SINEs originated from an inactive tRNA sequence or a tRNA -like sequence. In view of the evolutionary status of zebrafish in the Cyprinidae, we deduced that Zb-SINEs were a very old class of interspersed sequences.

关键词： short interspersed nuclear elements (SINEs) master gene model Opsar Zb-SINEs and Cyprinidae.

Rate of strong consistency of quasi maximum likelihood estimate in generalized linear models

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Science china Mathematics 2004年第6期47卷 882-893页

作者： YUE Li & CHEN Xiru School of Mathematics and Statistics, Wuhan university, Wuhan 430072, china graduate School, chinese academy of sciences, beijing 100039, china 1. School of Mathematics and Statistics Wuhan University 430072 Wuhan China 2. graduate School Chinese Academy of Sciences 100039 Beijing China

Under the assumption that in the generalized linear model (GLM) the expectation of the response variable has a correct specification and some other smooth conditions, it is shown that with probability one the quasi-likelihood equation for the GLM has a solution when the sample size n is sufficiently large. The rate of this solution tending to the true value is determined. In an important special case, this rate is the same as specified in the LIL for iid partial sums and thus cannot be improved anymore.

关键词： quasi-likelihood function generalized linear models strong consistency

The deep thermal characteristic of continental margin of the northern South china Sea

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chinese Science Bulletin 2000年第18期45卷 1717-1722页

作者： ZHANG Jian & WANG Jiyang1. graduate School, university of Science and Technology of china, chinese academy of sciences, beijing 100039, china 2. Institute of Geology, chinese academy of sciences, beijing 100029, china graduate School University of Science and Technology of China Chinese Academy of Sciences Beijing China Institute of Geology Chinese Academy of Sciences Beijing China

Heat flow plays an important role in the study ot thermal structure and thermal evolutionof continental margin of the northern South china Sea. The analysis of heat flow value shows that margin heat flow in the northern South china Sea is relatively high setting, but the percentage of crustal heat flow is lower than 35% in terrestrial heat flow. The terrestrial heat flow exhibited a current of rise from the Northern Continental Margin to the Southern Central Basin. However, the proportion of crustal heat flow in terrestrial heat flow slowly dropped down in the same direction. It is suggested that the main factor causing high heat flow setting is the moving up of hot material from asthenosphere.

关键词： margin of northern South china Sea terrestrial heat flow thermal structures.

Isolation and Characterization of Photosystem Ⅱ of Porphyra yezoensis Ueda

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Acta Biochimica et Biophysica Sinica 2004年第11期36卷 780-785页

作者： Zheng-Quan GAO, Guang-Ce WANG, and Cheng-Kui TSENGKey Laboratory of Experimental Marine Biology, Institute of Oceanology, the chinese academy of sciences, Qingdao 266071, china graduate school, the chinese academy of sciences, beijing 100039, china Key Laboratory of Experimental Marine Biology Institute of Oceanology the Chinese Academy of SciencesQingdao 266071 China graduate school the Chinese Academy of SciencesBeijing 100039 China

The thylakoid membranes were isolated and purified from gametophyte of Porphyra yezoensis Ueda (P. yezoensis) by sucrose density gradient ultracentrifugation. After P. yezoensis gametophyte thylakoid membranes were so... 详细信息

关键词： red algae Porphyra yezoensis Ueda photosystem Ⅱ polypeptide composition extrinsic protein

An initial research on fluorine average contents, affecting factors and hygienic standard of hot pepper

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Acta Geochimica 2006年第S1期 78-78页

作者： Bo LI1,2, Shehong LI1, Baoshan ZHENG1, Xiaojing LIU1, Lei LEI1,2, Jun HU1,2 1 State Key Lab. of Environmental Geochemistry, Institute of Geochemistry, chinese academy of sciences, Guiyang 550002, china 2 graduate university of chinese academy of sciences, beijing 100039, china

An improved method for evaluating the seasonal variability of total suspended sediment flux field in the Yellow and East china Seas

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International Journal of Sediment Research 2011年第1期26卷 1-14页

The suspended sediment flux field in the Yellow and East china Seas(YECS) displays its seasonal variability.A new method is introduced in this paper to obtain the flux field via retrieval of ocean color remote sensing data,statistical analysis of historical suspended sediment concentration data,and numerical simulation of three-dimensional(3D) flow *** components of the sediment flux field include(i) surface suspended sediment concentration inverted from ocean color remote sensing data;(ii) vertical distribution of suspended sediment concentration obtained by statistical analysis of historical observation data;and(iii) 3D flow field modeled by a numerical *** the improved method,the 3D suspended sediment flux field in the YECS has been *** comparison with the suspended sediment flux field solely based on the numerical simulation of a suspended sediment transport model,the suspended sediment flux field obtained by the improved method is found to be more *** 3D suspended sediment flux field from ocean colour remote sensing and in situ observation are more closer to the ***,by quantitatively analyzing the newly obtained suspended sediment flux field,the quantity of sediment erosion and deposition within the different regions can be *** sediment exchange between the Yellow Sea and the East china Sea can be *** mechanism of suspended sediment transport in the YECS can be better *** particular,it is suggested that the long-term transport of suspended sediment is controlled mainly by the circulation pattern,especially the current in winter.

关键词： Suspended sediment flux field Seasonal variability Yellow and East china Seas Regression equation Numerical simulation

Genetic fingerprinting of plankton community provides new insights into aquatic ecology

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Progress in Natural Science:Materials International 2006年第9期16卷 893-898页

作者： YAN Qingyun, YU Yuhe and FENG Weisong ( Institute of Hydrobiology, chinese academy of sciences, Wuhan 430072, china graduate School of the chinese academy of Sci-ences, beijing 100039, china) [a]Institute of Hydrobiology Chinese Academy of Sciences Wuhan China [b]graduate School of the chinese academy of sciences Bejing China

Over the past two decades, molecular techniques have been widely used in ecological study and molecular ecology has been one of the most important branches of ecology. Meanwhile, genetic fingerprinting analyses have significantly enhanced our knowledge of the diversity and evolutionary relations of the planktonic organisms. Compared with conventional approaches in ecological study (e.g. morphological classification), genetic fingerprinting techniques are simpler and much more effective. This review provides an overview of the principles, advantages and limitations of the commonly used DNA fingerprinting techniques in plankton research. The aim of this overview is to assess where we have been, where we are now and what the future holds for solving aquatic ecological problems with molecular-level information.

关键词： genetic fingerprinting plankton community aquatic ecology genetic diversity.

Observation results of relativistic electrons detected by Fengyun-1 satellite and analysis of relativistic electron enhancement (REE) events

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Science china(Physics,Mechanics & Astronomy) 2008年第12期51卷 1947-1956页

作者： YANG XiaoChao1,2↑ & WANG ShiJin1 1 Center for Space Science and Applied Research, chinese academy of sciences, beijing 100190, china 2 graduate university of chinese academy of sciences, beijing 100049, china 1. Center for Space Science and Applied Research Chinese Academy of Sciences Beijing 100190 China 2. graduate university of chinese academy of sciences Beijing 100049 China

The space particle component detector on Fengyun-1 satellite which works at the sun-synchronous orbit of about 870 km altitude has detected relativistic electrons for a long time. In comparison with the SAMPEX satellite observations during 1999–2004, the relativistic electron data from Fengyun-1 satellite from June 1999 to 2005 are used to analyze the relativistic electron enhancement (REE) events at the low earth orbit, and the possible correlation among REE events at the low earth orbit, high-speed solar wind and geomagnetic storms is discussed. The statistical result presents that 45 REE events are found in total during this time period, and the strong REE events with the maximum daily average flux > 400 cm?2·srt-1·s?1 occur mostly during the transition period from solar maximum to solar minimum. Among these 45 REE events, four strong REE events last a longer time period from 26-to 51-day and correlate closely with high speed solar wind and strong geomagnetic storms. Meanwhile, several strong geomagnetic storms occur continuously before these REE events, and these continuous geomagnetic storms would be an important factor causing these long-lasting strong REE events. The correlation analysis for overall 45 events indicates that the strength of the REE events correlates with the solar wind speed and the strength of the geomagnetic storm, and the correlation for strong REE events is much stronger than that for weak REE events.

关键词： relativistic electron enhancement low earth orbit high-speed solar wind geomagnetic storm

Trend of urban system structure under the restriction of water and land resources in Xinjiang

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chinese Science Bulletin 2006年第A01期51卷 179-188页

作者： ZHANG Xiaolei & LEIJun Xinjiang Institute of Ecology and Geography, chinese academy of sciences, Urumqi 830011, china Institute of Geographical Science and Natural Resources Research, chinese academy of sciences, beijing 100101, china graduate School, chinese academy of sciences, beijing 100039, china chinese Acad Sci Xinjiang Inst Ecol & Geog Urumqi 830011 Peoples R China chinese Acad Sci Inst Geog Sci & Nat Resources Res Beijing 100101 Peoples R China chinese Acad Sci Grad Sch Beijing 100039 Peoples R China

根据在 Xinjiang 影响城市的开发和城市的系统结构的水和陆地资源上的研究，这篇论文分析利用地位和城市的水资源的缺乏。城市的水资源的消费和浪费在一个增加趋势，这被考虑。然而，在 Xinjiang 的大多数城市和镇在水资源的缺乏水资源... 详细信息

根据在 Xinjiang 影响城市的开发和城市的系统结构的水和陆地资源上的研究，这篇论文分析利用地位和城市的水资源的缺乏。城市的水资源的消费和浪费在一个增加趋势，这被考虑。然而，在 Xinjiang 的大多数城市和镇在水资源的缺乏水资源的废物是严肃的，特别在小镇上。megapolis 和中等城市的发展被有限陆地资源显然限制。尽管有扩展小城市和镇的相对大的空格，水和陆地资源的输出好处是低的。为了完成城市的系统的顺序的扩大，在 Xinjiang 组织，在都市化的快速的发展拿一个圆和三条带和节俭资源的策略的城市的空间发展模式被建议。

关键词：城镇体系结构水资源土地资源供水能力新疆