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Systematic classification and phylogenetic relationships of the brown‑rot fungi within the Polyporales

Fungal Diversity 2023年第1期118卷 1-94页

作者： Shun Liu Yuan‑Yuan Chen Yi‑Fei Sun Xiao‑Lan He Chang‑Ge Song Jing Si Dong‑Mei Liu genevieve gates Bao‑Kai Cui Institute of Microbiology School of Ecology and Nature ConservationBeijing Forestry UniversityBeijing 100083China College of Forestry Henan Agricultural UniversityZhengzhou 450002HenanChina Sichuan Institute of Edible Fungi Sichuan Academy of Agricultural SciencesChengdu 610066SichuanChina Institute of Ecology Chinese Academy of Environmental SciencesBeijing 100012China Tasmanian Institute of Agriculture Private Bag 98HobartTAS 7001Australia

The brown-rot fungi play an important role in forest ecosystems;they can degrade celluloses and hemicelluloses of wood and maintain nutrient *** of the brown-rot fungi also have important economic value as medicinal or edible *** studies showed that the ability to produce brown rot has evolved independently at least five ***,the Polyporales contains the vast majority of the species of the brown-rot *** this study,the classification system of the brown-rot fungi within the Polyporales is ***,the phylogenetic relationships of brown-rot fungi within the Polyporales are analysed based on DNA sequences of multiple loci including the internal transcribed spacer(ITS)regions,the large subunit nuclear ribosomal RNA gene(nLSU),the small subunit nuclear ribosomal RNA gene(nSSU),the small subunit mitochondrial rRNA gene sequences(mtSSU),the translation elongation factor 1-αgene(TEF1),the RNA polymerase II largest subunit(RPB1)and the second subunit of RNA polymerase II(RPB2).The study showed that the brownrot fungi within the Polyporales formed fourteen lineages,which are assigned at family level,including four new families:Auriporiaceae,Piptoporellaceae,Postiaceae,Taiwanofungaceae,and ten existing families:Adustoporiaceae,Dacryobolaceae,Fibroporiaceae,Fomitopsidaceae,Laetiporaceae,Laricifomitaceae,Phaeolaceae,Pycnoporellaceae,Sarcoporiaceae,and ***,eleven new genera,viz.,Austroporia,Aurantipostia,Austropostia,Daedalella,Nothofagiporus,Pseudoantrodia,Pseudofomitopsis,Rhodoantrodia,Tenuipostia,Wolfiporiella and Wolfiporiopsis are proposed;eighteen new species,viz.,Amyloporia nivea,Antrodia subheteromorpha,Aurantipostia macrospora,Austropostia hirsuta,***,***,Cystidiopostia subhibernica,Daedalella micropora,Fuscopostia subfragilis,Lentoporia subcarbonica,Melanoporia tropica,Neolentiporus tropicus,Phaeolus fragilis,Postia crassicontexta,Pseudoantrodia monomitica,Pseudofomitopsis microcar

关键词： Brown-rot fungi Fomitopsidaceae Multi-gene phylogeny New taxa Taxonomy Wood-rotting fungi

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The quest for a globally comprehensible Russula language

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Fungal Diversity 2019年第6期99卷 369-449页

作者： Slavomır Adamcik Brian Looney Miroslav Cabon Sona Jancovicova Katarina Adamcikova Peter G.Avis Magdalena Barajas Rajendra P.Bhatt Adriana Corrales Kanad Das Felix Hampe Aniket Ghosh genevieve gates Ville Kalviainen Abdul Nasir Khalid Munazza Kiran Ruben De Lange Hyun Lee Young Woon Lim Alejandro Kong Cathrin Manz Clark Ovrebo Malka Saba Tero Taipale Annemieke Verbeken Komsit Wisitrassameewong Bart Buyck Institute of Botany Plant Science and Biodiversity CenterSlovak Academy of SciencesDubravska cesta 984523 BratislavaSlovakia Department of Biology Duke University130 Science DriveDurhamNC 27708-0338USA Department of Botany Faculty of Natural SciencesComeniusUniversity in BratislavaRevova 3981102 BratislavaSlovakia Department of Plant Pathology and Mycology Institute of Forest EcologySlovak Academy of Sciences ZvolenAkademicka 294901 NitraSlovakia Indiana University Northwest 3400 BroadwayMarram HallRoom 308GaryIN 46408USA Department of Botany&Microbiology H.N.B.Garhwal UniversityGarhwalSrinagar 246174UttarakhandIndia Programa de Biologia Facultad de Ciencias Naturales y MatematicasUniversidad del RosarioCr.24#63C-69BogotaD.C.Colombia A.J.C.Bose Indian Botanic Garden Botanical Survey of IndiaP.O.Botanic GardenHowrah 711103India Grafenroda Germany Tasmanian Institute of Agriculture Private Bag 98HobartTAS 7001Australia Helsinki Finland Department of Botany University of the PunjabQuaid-e-Azam CampusLahore 54590Pakistan Department of Biology Ghent UniversityK.L.Ledeganckstraat 359000 GhentBelgium School of Biological Sciences and Institute of Microbiology Seoul National UniversitySeoul 08826South Korea Centro de Investigaciones en Ciencias Biologicas Km.10.5 Carretera San Martin Texmelucan-TlaxcalaCP.90120IxtacuixtlaTlaxcalaMexico Department of Mycology Goethe University Frankfurt am MainBiologicumMax-von-Laue-Str.1360438 Frankfurt am MainGermany Department of Biology University of Central Oklahoma100.N.University DriveBox 89EdmondOK 73034USA Department of Plant Sciences Quaid-i-Azam UniversityIslamabad 45320Pakistan Koskenkylan Saha Finland Institut de Systematique Ecologie et Biodiversite(ISYEB)Museum national d’histoire naturelleCNRSSorbonne UniversiteEPHE57 rue CuvierCP 3975005 ParisFrance

Since 2007,the quality of Russula descriptions has improved and the use of molecular support for species delimitation and the number of published new species has ***,the description style is not consistent and has regional or author-specific *** recent publications still favour descriptions of spores compared to hymenium and pileipellis elements,and usually only the spore size is provided with statistical *** study proposes standards for descriptions of the microscopic structure of Russula species(Russulaceae,Agaricomycetes).We present the description template,the template measurements table,the specific terminology and the essential chemical *** proposed standards were tested by mycologists from 11 countries who met at the Russula Microscopy Workshop in *** of 26 species from 9 countries and four continents were prepared,among them ***,***,*** and *** are re-described and 15 species are introduced as new:***,***,***,***,***,***,***,***,***,***,***,***,***,***-pauli and *** descriptions for candidate new species are provided without a formal name *** comparison of species described in this study with available similar descriptions of related species suggests that microscopic characters from all parts of the basidiomata can be equally important for species recognition and they deserve the same treatment including number of measurements and *** majority of recent studies does not recognise differences between the pileus margin and centre,but more than one-third of the species described in this study show distinct differences between the pileus areas,emphasizing the importance to specify the origin of pileipellis *** study proved that there is frequently insufficient difference in the I

关键词： Morphology standards New species Phylogeny Species delimitation Taxonomy

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Induced pluripotent stem cell-related approaches to generate dopaminergic neurons for Parkinson's disease

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Neural Regeneration Research 2025年第11期20卷 3193-3206页

作者： Ling-Xiao Yi Hui Ren Woon genevieve Saw Li Zeng Eng King Tan Zhi Dong Zhou National Neuroscience Institute Singapore Nanyang Technology University Singapore Department of Neurology Singapore General HospitalSingapore Signature Research Program in Neuroscience and Behavioral Disorders Duke-NUS Medical SchoolSingapore

The progressive loss of dopaminergic neurons in affected patient brains is one of the pathological features of Parkinson's disease,the second most common human neurodegenerative *** the detailed pathogenesis accounting for dopaminergic neuron degeneration in Parkinson's disease is still unclear,the advancement of stem cell approaches has shown promise for Parkinson's disease research and *** induced pluripotent stem cells have been commonly used to generate dopaminergic neurons,which has provided valuable insights to improve our understanding of Parkinson's disease pathogenesis and contributed to anti-Parkinson's disease *** current review discusses the practical approaches and potential applications of induced pluripotent stem cell techniques for generating and differentiating dopaminergic neurons from induced pluripotent stem *** benefits of induced pluripotent stem cell-based research are *** dopaminergic neuron differentiation protocols from induced pluripotent stem cells are *** emerging three-dimension-based brain organoid models compared with conventional two-dimensional cell culture are ***,limitations,challenges,and future directions of induced pluripotent stem cell–based approaches are analyzed and proposed,which will be significant to the future application of induced pluripotent stem cell-related techniques for Parkinson's disease.

关键词： dopaminergic neurons induced pluripotent stem cells Parkinson's disease stem cell approaches

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Management of chronic heart failure in the older population

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Journal of Geriatric Cardiology 2014年第4期11卷 329-337页

作者： Nahid Azad genevieve Lemay Ottawa Hospital Civic Campus Geriatric Assessment Unit 1053 Carling Avenue Box 678 Ottawa ON K1Y 4E9 Canada

Chronic heart failure （CHF） is the leading cause of hospitalization for those over the age of 65 and represents a significant clinical and economic burden. About half of hospital re-admissions are related to co-morbidities, polypharmacy and disabilities associated with CHF. Moreover, CHF also has an enormous cost in terms of poor prognosis with an average one year mortality of 33%–35%. While more than half of patients with CHF are over 75 years, most clinical trials have included younger patients with a mean age of 61 years. Inadequate data makes treatment decisions challenging for the providers. Older CHF patients are more often female, have less cardiovascular diseases and associated risk factors, but higher rates of non-cardiovascular conditions and diastolic dysfunction. The prevalence of CHF with reduced ejection fraction, ischemic heart disease, and its risk factors declines with age, whereas the prevalence of non-cardiac co-morbidities, such as chronic renal failure, dementia, anemia and malignancy increases with age. Diabetes and hypertension are among the strongest risk factors as predictors of CHF particularly among women with coronary heart disease. This review paper will focus on the specific consideration for CHF assessment in the older population. Management strategies will be reviewed, including non-pharmacologic, pharmacologic, quality care indicators, quality improvement in care transition and lastly, end-of-life issues. Palliative care should be an integral part of an interdiscipli-nary team approach for a comprehensive care plan over the whole disease trajectory. In addition, frailty contributes valuable prognostic in-sight incremental to existing risk models and assists clinicians in defining optimal care pathways for their patients.

关键词： Heart failure Elderly patient Management Hypertension Coronary artery disease diabetes

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Treatment, residual chlorine and season as factors affecting variability of trihalomethanes in small drinking water systems

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Frontiers of Environmental Science & Engineering 2015年第1期9卷 171-179页

作者： Roberta DYCK genevieve COOL Manuel RODRIGUEZ Rehan SADIQ School of Engineering University of British Columbia Okanagan Kelowna V1V 1V7 Canada Ecole superieure d'amenagement du territoire Universite Laval Quebec G1V 0A6 Canada

Seasonal variability in source water can lead to challenges for drinking water providers related to operational optimization and process control in treatment facilities. The objective of this study is to investigate seasonal variability of water quality in municipal small water systems （〈 3000 residents） supplied by surface waters. Residual chlorine and trihalomethanes （THM） were measured over seven years （2003-2009）. Comparisons are made within each system over time, as well as between systems according to the type of their treatment technologies. THM concentrations are generally higher in the summer and autumn. The seasonal variability was generally more pronounced in systems using chlorination plus additional treatment. Chloroform, total THM （TTHM） and residual chlorine concentrations were generally lower in systems using chlorination plus additional treatment. Conversely, brominated THM concentrations were higher in systems using additional treatment. Residual chlorine was highest in the winter and lowest in the spring and summer. Seasonal variations were most pronounced for residual chlorine in systems with additional treatment. There was generally poor correlation between THM concentrations and concentrations of residual chlorine. Further study with these data will be beneficial in finding determinants and indicators for both quantity and variability of disinfection byproducts and other water quality parameters.

关键词： drinking water residual chlorine seasonal variability small municipal systems treatment technologies trihalomethanes

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In vivo and in vitro use of plasma membrane DNA in the detection and follow-up of systemic lupus erythematosus

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Journal of Molecular Cell Biology 2011年第3期3卷 200-201页

作者： Jacqueline Keyhani Ezzatollah Keyhani genevieve Servais Jean Duchateau Laboratory for Life Sciences 19979 TehranIran Immunology Department University Hospital BrugmannU.L.B.BrusselsBelgium

Dear Editor,Systemic lupus erythematosus(SLE)is a chronic inflammatory autoimmune disease in which the immune system attacks the patient’s tissues,resulting in inflammation and damage(Tan et al.,1982).SLE is associated with the presence of abnormally elevated titers of a variety of antibodies,including antibodies to doublestranded(ds)DNA,in the serum(Egner,2000).

关键词： lupus erythematosus damage vivo

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Chemical Analysis of Tire Traces in Traffic Accidents Investigation

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Journal of Forensic Science and Medicine 2015年第2期1卷 99-108页

作者： Line Gueissaz genevieve Massonnet Faculty of Law Criminal Justice and Public AdministrationSchool of Criminal JusticeUniversity of LausanneBatochimeCH-1015 Lausanne-DorignySwitzerland

The aim of the forensic investigation of traffic accidents is to help establish the nature and/or the circumstances of the *** might be done with the purpose of determining the legal responsibilities of each person involved or to provide families,with a reconstruction of the events,to help understand why their relatives were injured or killed.A methodology for the comparison of chemical profiles of tire traces and tire tread samples obtained by pyrolysis-gas chromatography/mass spectrometry has been *** profiles are represented by relative abundances of 86 *** variability of the tread within and between 12 tires was *** the level of the source as"brand and model"the intra-variability was found to be smaller than the inter-variability leading to the complete discrimination of the 12 tires of the sample *** tests were carried out on a racetrack in order to produce tire traces which origin was *** results obtained with a supervised classification method showed that more than 94%of the replicates of the traces were correctly assigned to the class membership(i.e.,brand and model)of the tire at their *** results support that the chemical profile of one trace does not differ from the chemical profile of the tire at its origin but differs generally from the other chemical profiles of the sample set.

关键词： Car chemometrics pyrolysis road rubber tire marks tread

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The Global Soil Mycobiome consortium dataset for boosting fungal diversity research

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Fungal Diversity 2021年第6期111卷 573-588页

作者： Leho Tedersoo Vladimir Mikryukov Sten Anslan Mohammad Bahram Abdul Nasir Khalid Adriana Corrales Ahto Agan Aída-M.Vasco-Palacios Alessandro Saitta Alexandre Antonelli Andrea C.Rinaldi Annemieke Verbeken Bobby P.Sulistyo Boris Tamgnoue Brendan Furneaux Camila Duarte Ritter Casper Nyamukondiwa Cathy Sharp César Marín D.Q.Dai Daniyal Gohar Dipon Sharmah Elisabeth Machteld Biersma Erin K.Cameron Eske De Crop Eveli Otsing Evgeny A.Davydov Felipe E.Albornoz Francis Q.Brearley Franz Buegger genevieve gates Geoffrey Zahn Gregory Bonito Indrek Hiiesalu Inga Hiiesalu Irma Zettur Isabel C.Barrio Jaan Pärn Jacob Heilmann-Clausen Jelena Ankuda John Y.Kupagme Joosep Sarapuu Jose G.Maciá-Vicente Joseph Djeugap Fovo József Geml Juha M.Alatalo Julieta Alvarez-Manjarrez Jutamart Monkai Kadri Põldmaa Kadri Runnel Kalev Adamson Kari A.Bråthen Karin Pritsch Kassim I.Tchan Kęstutis Armolaitis Kevin D.Hyde Kevin K.Newsham Kristel Panksep Lateef A.Adebola Louis J.Lamit Malka Saba Marcela Eda Silva Cáceres Maria Tuomi Marieka Gryzenhout Marijn Bauters Miklós Bálint Nalin Wijayawardene Niloufar Hagh-Doust Nourou S.Yorou Olavi Kurina Peter E.Mortimer Peter Meidl RHenrik Nilsson Rasmus Puusepp Rebeca Casique-Valdés Rein Drenkhan Roberto Garibay-Orijel Roberto Godoy Saleh Alfarraj Saleh Rahimlou Sergei Põlme Sergey V.Dudov Sunil Mundra Talaat Ahmed Tarquin Netherway Terry W.Henkel Tomas Roslin Vladimir E.Fedosov Vladimir G.Onipchenko WAErandi Yasanthika Young Woon Lim Meike Piepenbring Darta Klavina Urmas Kõljalg Kessy Abarenkov Mycology and Microbiology Center University of TartuTartuEstonia Institute of Ecology and Earth Sciences TartuEstonia Department of Ecology Swedish University of Agricultural SciencesUppsalaSweden Department of Botany University of the PunjabQuaid-e-Azam CampusLahorePakistan Centro de Investigaciones en Microbiología y Biotecnología-UR(CIMBIUR) Facultad de Ciencias NaturalesUniversidad del RosarioBogotáColombia Grupo de Microbiología Ambiental y BioMicro Escuela de MicrobiologíaUniversidad de Antioquia UdeAMedellínColombia Department of Agricultural Food and Forest SciencesUniversity of PalermoPalermoItaly Royal Botanic Gardens SurreyUK Department of Biomedical Sciences University of CagliariCagliariItaly Research Group Mycology Department of BiologyGhent UniversityGhentBelgium Department of Biomedicine Indonesia International Institute for Life SciencesJakartaIndonesia Plant Pathology and Agricultural Zoology Research Unit Department of Plant ProtectionFaculty of Agronomy and Agricultural SciencesUniversity of DschangDschangCameroon Department of Ecology and Genetics Uppsala UniversityUppsalaSweden Eukaryotic Microbiology University of Duisburg-EssenEssenGermany Department of Biological Sciences and Biotechnology Botswana International University of Science and TechnologyPalapyeBotswana Natural History Museum of Zimbabwe BulawayoZimbabwe Institute of Botany Czech Academy of SciencesPrůhoniceCzech Republic Center for Yunnan Plateau Biological Resources Protection and Utilization College of Biological Resource and Food EngineeringQujing Normal UniversityQujingPeople’s Republic of China Department of Botany Jawaharlal Nehru Rajkeeya MahavidyalayaPondicherry UniversityPort BlairIndia British Antarctic Survey NERCCambridgeUK Natural History Museum of Denmark University of CopenhagenCopenhagenDenmark Department of Environmental Science Saint Mary’s UniversityHalifaxNSCanada Altai State University BarnaulRussia CSIRO Land and Water WembleyWAAustralia Department of N

Fungi are highly important biotic components of terrestrial ecosystems,but we still have a very limited understanding about their diversity and *** data article releases a global soil fungal dataset of the Global Soil Mycobiome consortium(GSMc)to boost further research in fungal diversity,biogeography and *** dataset comprises 722,682 fungal operational taxonomic units(OTUs)derived from PacBio sequencing of full-length ITS and 18S-V9 variable regions from 3200 plots in 108 countries on all *** plots are supplied with geographical and edaphic *** OTUs are taxonomically and functionally assigned to guilds and other functional *** entire dataset has been corrected by excluding chimeras,index-switch artefacts and potential *** dataset is more inclusive in terms of geographical breadth and phylogenetic diversity of fungi than previously published *** GSMc dataset is available over the PlutoF repository.

关键词： Soil fungi Global dataset PacBio sequencing Fungal richness

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Gregarious pupation act as a defensive mechanism against cannibalism and intraguild predation

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Insect Science 2016年第4期23卷 612-620页

作者： Claudia Roberge Bruno Frechette genevieve Labrie Francois Dumont Eric Lucas Universite du Quebec a Montreal Departement des Sciences Biologiques CP 8888 Succ. Centre Ville Montreal Centre de recherche sur les grains Inc (CEROM) 740 chemin Trudeau St-Mathieu-de-Beloeil Quebec J3G OE2 Canada

Coccinellid pupae use an array of defensive strategies against their natural enemies. This study aims to assess the efficiency of gregarious pupation as a defensive mechanism against intraguild predators and cannibals in coccinellid. The study was designed specifically （i） to determine the natural occurrence of gregarious pupation in the field for different coccinellid species, and （ii） to evaluate the adaptive value of gregarious pupation as a defensive mechanism against 2 types of predators （i.e., cannibals and intraguild predators）. In the field, gregarious pupation consisted of a group of 2-5 pupae. The proportion of gregarious pupation observed varied according to species, the highest rate being observed with Harmonia axyridis Pallas （Coccinellidae; 14.17%）. Gregarious pupation had no impact on the probability that intraguild predators and cannibals locate pupae. Intraguild predation occurred more often in site with gregarious pupation, while cannibalism occurred as often in site with gregarious pupation as in site with isolated pupa. However, for a specific pupa, the mortality rate was higher for isolated pupae than for pupae located in a gregarious pupation site both in the presence of intraguild predators and in the presence of cannibals. The spatial location of pupae within the group had no impact on mortality rate. Since it reduces the risk of predation, it is proposed that gregarious pupation act as a defensive mechanism for 11. axyridis pupae.

关键词： attack abatement Coccinellidae dilution effect encounter effect grouping behavior Pentatomidae Selfish herd

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Effectiveness of royal jelly supplementation in glycemic regulation:A systematic review

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World Journal of Diabetes 2019年第2期10卷 96-113页

作者： Kamel Omer Maxwell J Gelkopf genevieve Newton Department of Human Health and Nutritional Sciences University of Guelph

BACKGROUND Royal jelly(RJ)has been observed to have therapeutic properties in diabetic individuals,including the reduction of high blood *** systematic review synthesized existing evidence to investigate the effectiveness of RJ supplementation in managing measures of blood *** To determine the effectiveness of RJ supplementation on glycemic responses in healthy and non-insulin dependent diabetic adults,as well as animal models of *** This was a systematic review employing the PRISMA ***-reviewed,published articles were extracted from several databases using key words related to target population,intervention and outcome and hand-selected for *** articles proceeded to data extraction phase,where information on target parameters and effectiveness of treatment was *** this,the risk of bias for each included study was ***,the long-term and immediate effectiveness of RJ supplementation in glycemic control were assessed using the Grading of Recommendations,Assessment,Development and Evaluations(GRADE)tool,which rates the quality of *** Of 168 articles extracted from database searching,eighteen were included for analysis in this systematic *** the studies,studied populations,intervention styles and outcome measures were largely *** this,the results in studies indicate a general trend of positive effect of RJ in glycemic regulation in vitro and in ***,some dose-dependent glycemic effects were observed,along with some large effect *** risk of bias for human and animal studies is generally low-unclear risk,although lack of blinding is a serious concern in both ***,as per the GRADE tool,the quality of evidence is low,and very low for long-term and immediate effectiveness of RJ,respectively.A major limitation affecting evidence quality is the heterogeneity among included *** blood glucose and glucose clearance a

关键词： Royal jelly Type 2 diabetes Dietary supplement Glycemic control 10-hydroxy-trans-2-decenoic acid Hyperglycemia Adults Animals

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