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Near Infrared Spectroscopy (NIRS) Model-Based Prediction for Protein Content in Cowpea

American Journal of Plant Sciences 2024年第3期15卷 145-160页

作者： Kavera Biradar Waltram Ravelombola Aurora Manley caroline ruhl Texas A&M AgriLife Research Vernon TX USA University of Agricultural Sciences Dharwad India Department of Soil and Crop Sciences Texas A&M University College Station TX USA

Cowpea (Vigna unguiculata L. Walp) is a multi-purpose legume with high quality protein for human consumption and livestock. The objective of this work was to develop near-infrared spectroscopy (NIRS) prediction models to estimate protein content in cowpea. A total of 116 cowpea breeding lines with a wide range of protein contents (19.28 % to 32.04%) were selected to build the model using whole seed and ground seed samples. Partial least-squares discriminant analysis (PLS-DA) regression technique with different pre-treatments (derivatives, standard normal variate, and multiplicative scatter correction) were carried out to develop the protein prediction model. Results showed: 1) spectral plots of both the whole seed and ground seed showed higher spectral scatter at higher wavelengths (>1450 nm), 2) data pre-processing affects prediction accuracy for bot whole seed and ground seed samples, 3) prediction using ground seed samples (0.64 R2 0.85) is better than the whole seed (0.33 R2 0.78), and 4) the data pre-processing second derivative with standard normal variate has the best prediction (R2_whole seed = 0.78, R2_ground seed = 0.85). The results will be of interest in cowpea breeding programs aimed at improving total seed protein content.

关键词： Cowpea Germplasm Protein Near-Infrared Spectroscopy (NIRS) Partial Least Squares (PLS)

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Initiation of Unmanned Aerial System (UAS) Phenotyping of Plant Height and Canopy Width in Guar

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American Journal of Plant Sciences 2022年第12期13卷 1427-1438页

作者： Waltram Ravelombola Aurora Manley caroline ruhl Madeline Brown Hanh Pham Shubham Malani Waqas Ahmad Texas A&M AgriLife Research Vernon TX USA Department of Soil and Crop Sciences Texas A&M University TX USA Texas A&M AgriLife Research Lubbock TX USA

The use of the Unmanned Aerial System (UAS) has attracted scientific attention because of its potential to generate high-throughput phenotyping data. The application of UAS to guar phenotyping remains limited. Guar is multi-purpose legume species. India and Pakistan are the world’s top guar producers. The U.S. is the world guar largest market with an import value of >$1 billion annually. The objective of this study was to test the feasibility of UAS phenotyping of plant height and canopy width in guar. The UAS data were collected from a field plot of 10 guar accessions on July 7, 2021, and September 27, 2021. The study was organized in a Randomized Complete Block Design (RCBD) with 3 blocks. A total of 23 Vegetation Indices (VIs) were computed. The analysis of variance showed significant genotypic effects on plant weight (p < 0.05) and canopy width (p on plant height (p most VIs were significant for both flights (p Vegetation Index (NDVI) and Red Edge Normalized Difference Vegetation Index (NDRE) were significantly and highly correlated with plant height (r = 0.74) and canopy width (r = 0.68). The results will be of interest in developing high throughput phenotyping approach for guar breeding.

关键词： Guar Unmanned Aerial System Vegetation Indices Phenotyping Plant Height Canopy Width

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Use of Unmanned Aerial System (UAS) Phenotyping to Predict Pod and Seed Yield in Organic Peanuts

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American Journal of Plant Sciences 2023年第3期14卷 415-426页

作者： Aurora Manley Waltram Ravelombola John Cason Brian Bennett Hanh Pham Emi Kimura caroline ruhl Waqas Ahmad Madeline Brown Texas A&M AgriLife Research Vernon Texas USA Department of Soil and Crop Sciences Texas A&M University College Station Texas USA Texas A&M AgriLife Research Stephenville Texas USA Texas A&M AgriLife Research Lubbock Texas USA Texas A&M AgriLife Extension Vernon Texas USA

Peanut (Arachis hypogaea L.) is a highly nutritious food that is an excellent source of protein and is associated with increased coronary health, lower risk of type-2 diabetes, lower risk of breast cancer and a healthy profile of inflammatory biomarkers. The domestic demand for organic peanuts has significantly increased, requiring new breeding efforts to develop peanut varieties adapted to the organic farming system. The use of unmanned aerial system (UAS) has gained scientific attention because of the ability to generate high-throughput phenotypic data. However, it has not been fully investigated for phenotyping agronomic traits of organic peanuts. Peanuts are beneficial for cardio system protection and are widely used. Within the U.S., peanuts are grown in 11 states on roughly 600,000 hectares and averaging 4500 kg/ha. This study’s objective was to test the accuracy of UAS data in the phenotyping pod and seed yield of organic peanuts. UAS data was collected from a field plot with 20 Spanish peanut breeding lines on July 07, 2021 and September 27, 2021. The study was a randomized complete block design (RCBD) with 3 blocks. Twenty-five vegetation indices (VIs) were calculated. The analysis of variance showed significant genotypic effects on all 25 vegetation indices for both flights (p < 0.05). The vegetation index Red edge (RE) from the first flight was the most significantly correlated with both pod (r = 0.44) and seed yield (r = 0.64). These results can be used to further advance organic peanut breeding efforts with high-throughput data collection.

关键词： Peanut Unmanned Aerial System Vegetation Indices Phenotyping Pod Yield Seed Yield

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