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Building Expertise on FAIR Through Evolving Bring Your Ow. Data(BYOD) w.rkshops: Desc.ibing the Data, Softw.re, and Management-foc.sed Approac.es and Their Evolution

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Data Intelligenc. 2024年第2期6卷 429-456页

作者： c.sar H.Bernabé Lieze Thielemans Rajaram Kaliyaperumal c.audio c.rta Shuxin Zhang c.lia w.G.van Gelder Nirupama Benis Luiz Olavo Bonino da Silva Santos Ronald c.rnet Bruna dos Santos Vieira Naw.l Lalout Ines Henriques Alberto c.mara Ballesteros Kees burger Martijn G.Kersloot Friederike Ehrhart Esther van Enc.evort c.ris T.Evelo Alasdair J.G.Gray Marc.Hanauer Kristina Hettne Joep de Ligt Arnaldo Pereira Nuria Queralt-Rosinac. Erik Sc.ultes Domenic. Tarusc.o Andra w.agmeester Mark D.w.lkinson Egon L.w.llighagen Masc.a Jansen Barend Mons Marc. Roos Annika Jac.bsen Biosemantic. Group Department of Human GeneticsLeiden University Medical CentreLeidenThe Netherlands NIHR Ac.demic.Fellow.in General Prac.ic. University College London and The Royal Free NHS Foundation Trust National c.ntre for Rare Diseases Istituto Superiore di SanitaRomeItaly Department of Medic.l Informatic. Amsterdam UMC location University of AmsterdamMeibergdreef 9AmsterdamThe Netherlands Amsterdam Public.Health Methodology&Digital HealthAmsterdamThe Netherlands Health-Rl UtrechtThe Netherlands Semantic. Services and Cybersecurity groupUniversity of TwenteEnschedeThe Netherlands Department of Medic.l Imaging Radboud Institute for Health SciencesRadboud University Medical CenterNijmegenThe Netherlands Department of Medic.l BioSc.enc.s Radboud University Medical CenterNijmegenThe Netherlands The Duc.enne Parent Projec. VeneendaalThe Netherlands Departamento de Biotec.ologia-Biologia Vegetal Escuela Tecnica Superior de Ingenieria AgronomicaAlimentaria y de BiosistemasCentro de Biotecnologia y Genomica de PlantasUniversidad Politecnica de Madrid(UPM)-Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria-CSIC(INIA-CSIC).Campus MontegancedoPozuelo de Alarcon(Madrid)Spain c.stor AmsterdamThe Netherlands Department of Bioinformatic.-BiGc.T Maastricht UniversityMaastrichtThe Netherlands University Medic.l c.nter Groningen University of GroningenGroningenThe Netherlands Maastric.t c.ntre for Systems Biology(Mac.Bio) Maastricht UniversityMaastrichtThe Netherlands Department of c.mputer Sc.enc. Heriot-Watt UniversityEdinburghUK INSERM US14-OrphanetPlateforme Maladies RaresParisFrance c.ntre for Digital Sc.olarship Leiden University LibrariesThe Netherlands c.nter for Molec.lar Medic.ne Cancer Genomics NetherlandsDepartment of GeneticsUniversity Medical Center UtrechtUniversity UtrechtThe Netherlands University of Aveiro DETI/IEETAAveiroPortugal GO FAIR Foundation LeidenThe Netherlands The Leiden Ac.demic.c.nter for Drug Researc. LeidenThe Netherlands Mic.l

Sinc. 2014,"Bring Your Ow. Data"w.rkshops(BYODs)have been organised to inform people about the proc.ss and benefits of making resourc.s Findable,Ac.essible,Interoperable,and Reusable(FAIR,and the FAIRific.tion proc.ss).The BYOD w.rkshops'c.ntent and format differ depending on their goal,c.ntext,and the bac.ground and needs of ***-foc.sed BYODs educ.te domain experts on how.to make their data FAIR to find new.answ.rs to researc. ***-foc.sed BYODs promote the benefits of making data FAIR and instruc. projec. managers and polic.-makers on the c.arac.eristic. of FAIRific.tion ***-foc.sed BYODs gather softw.re developers and experts on FAIR to implement or improve softw.re resourc.s that are used to support ***,these BYODs intend to foster c.llaboration betw.en different types of stakeholders involved in data management,c.ration,and reuse(*** experts,trainers,developers,data ow.ers,data analysts,FAIR experts).The BYODs also serve as an opportunity to learn w.at kind of support for FAIRific.tion is needed from different c.mmunities and to develop teac.ing materials based on prac.ic.l examples and *** this paper,w. detail the three different struc.ures of the BYODs and desc.ibe examples of early BYODs related to plant breeding data,and rare disease registries and biobanks,w.ic. have shaped the struc.ure of the *** disc.ss the latest insights into making BYODs more produc.ive by leveraging our almost ten years of training experienc. in these w.rkshops,inc.uding suc.esses and enc.untered ***,w. examine how.the partic.pants'feedbac. has motivated the researc. on FAIR,inc.uding the development of w.rkflow. and softw.re.

关键词： FAIR FAIRific.tion FAIR expertise Bring Your Ow. Data w.rkshop BYOD

Numeric.l Approximation of Osc.llatory Solutions of Hyperbolic.Elliptic.Systems of c.nservation Law. by Multiresolution Sc.emes

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Advanc.s in Applied Mathematic. and Mec.anic. 2009年第5期1卷 581-614页

作者： Stefan Berres Raimund burger Alic. Kozakevic.us Departamento de c.enc.as Matematic.s y Fısic.s Universidad Catolica de TemucoTemucoChile c.2MA and Departamento de Ingenier´ıa Matem´atic. Facultad de Ciencias Fısicas y Matem´aticasUniversidad de Concepci´onCasilla 160-CConcepci´onChile Departamento de Matematic.-c.NE Universidade Federal de Santa MariaAv.Roraima1000Campus Universit´arioSanta MariaRSCEP 97105-900Brazil

The generic.struc.ure of solutions of initial value problems of hyperbolic.elliptic.systems,also c.lled mixed systems,of c.nservation law. is not yet fully *** reason for the absenc. of a c.re w.ll-posedness theory for these equations is the sensitivity of their solutions to the struc.ure of a parabolic.regularization w.en attempting to single out an admissible solution by the vanishing visc.sity *** is,how.ver,theoretic.l and numeric.l evidenc. for the appearanc. of solutions that exhibit persistent osc.llations,so-c.lled osc.llatory w.ves,w.ic. are(in general,measure-valued)solutions that emerge from Riemann data or slightly perturbed c.nstant data c.osen from the interior of the elliptic.*** c.pture these solutions,usually a fine c.mputational grid is *** this w.rk,a version of the multiresolution method applied to a w.NO sc.eme for systems of c.nservation law. is proposed as a simulation tool for the effic.ent c.mputation of solutions of osc.llatory w.ve *** hyperbolic.elliptic.2×2 systems of c.nservation law. c.nsidered are a prototype system for three-phase flow.in porous media and a system modeling the separation of a heavy-buoyant bidisperse *** the latter c.se,varying one sc.lar parameter produc.s elliptic.regions of different shapes and numbers of points of tangenc. w.th the borders of the phase spac.,giving rise to different kinds of osc.llation w.ves.

关键词： Hyperbolic.elliptic.system c.nservation law osc.llation w.ve numeric.l simulation multiresolution method sedimentation model

A Diffusively c.rrec.ed Multic.ass Lighthill-w.itham-Ric.ards Traffic.Model w.th Antic.pation Lengths and Reac.ion Times

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Advanc.s in Applied Mathematic. and Mec.anic. 2013年第5期5卷 728-758页

作者： Raimund burger Pep Mulet Luis M.Villada c.2MA and Departamento de Ingenierıa Matematic. Facultad de Ciencias Fısicas y MatematicasUniversidad de ConcepcionCasilla 160-CConcepcionChile Departament de Matematic. Aplic.da Universitat de ValenciaAv.Dr.Moliner 50E-46100 BurjassotSpain

Multic.ass Lighthill-w.itham-Ric.ards traffic.odels[Benzoni-Gavage and c.lombo,***.,14(2003),pp.587–612;w.ng and w.ng,***.A,36(2002),pp.827–841]give rise to first-order systems of c.nservation law. that are hyperbolic.under usual c.nditions,so that their assoc.ated c.uc.y problems are *** lengths and reac.ion times c.n be inc.rporated into these models by adding c.rtain c.nservative sec.nd-order terms to these first-order c.nservation *** terms c.n be diffusive under c.rtain c.rc.mstanc.s,thus,in princ.ple,ensuring the stability of the *** purpose of this paper is to analyze the stability of these diffusively c.rrec.edmodels under varying reac.ion times and antic.pation *** is demonstrated that instabilities may develop for high reac.ion times and short antic.pation lengths,and that these instabilities may have c.ntrolled frequenc.es and amplitudes due to their nonlinear nature.

关键词： Traffic.flow multispec.es model antic.pation length reac.ion time diffusive c.rrec.ion quasilinear system of sec.nd-order PDEs stability numeric.l simulation

Design and experimental study of thermal c.ntrol system for AMS c.yoc.olers

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c.inese Sc.enc. Bulletin 2013年第5期58卷 1200-1204页

作者： w.NG NaiHua JOSEPH burger c.ENG Lin Institute of Thermal Sc.enc. Shandong University Laboratory for Nuc.ear Sc.enc. Massachusetts Institute of Technology

The Alpha Magnetic.Spec.rometer(AMS) is an instrument for the international sc.entific.experiment,c.mposed of six detec.ors and 650 *** objec.ive of AMS experiment is to searc. for dark matter and anti-matter in *** this paper,the thermal c.ntrol system for AMS c.yoc.olers is designed,analyzed and experimentally *** loop heat pipes(LHPs) as the main heat dissipation c.mponent,the thermal c.ntrol system has suffic.ent heat dissipation c.pability to prevent the c.yoc.olers from over temperature(+40℃) in hot environment,meanw.ile to ensure temperatures of the c.yoc.olers higher than their low.r limit(-20℃) in c.ld *** results show.that the thermal c.ntrol system for AMS c.yoc.olers func.ions stably satisfying design spec.fic.tion.

关键词： AMS实验科学实验设计规范制冷机热控系统热控制系统阿尔法磁谱仪散热能力

Performanc. and c.libration of quark/gluon-jet taggers using 140 fb^(-1) of pp c.llisions at √s=13 TeV w.th the ATLAS detec.or

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c.inese Physic. c 2024年第2期48卷 1-25页

作者： G. Aad B. Abbott K. Abeling N.J. Abic.t S.H. Abidi A. Aboulhorma H. Abramow.c. H. Abreu Y. Abulaiti B.S. Ac.arya c. Adam Bourdarios L. Adamc.yk S.V. Addepalli M.J. Addison J. Adelman A. Adiguzel T. Adye A.A. Affolder Y. Afik M.N. Agaras J. Agarw.la A. Aggarw.l c. Agheorghiesei A. Ahmad F. Ahmadov w.S. Ahmed S. Ahuja X. Ai G. Aielli A. Aikot M. Ait Tamlihat B. Aitbenc.ikh I. Aizenberg M. Akbiyik T.P.A. Åkesson A.V. Akimov D. Akiyama N.N. Akolkar K. Al Khoury G.L. Alberghi J. Albert P. Albic.c.o G.L. Albouy S. Alderw.ireldt M. Aleksa I.N. Aleksandrov c. Alexa T. Alexopoulos F. Alfonsi M. Algren M. Alhroob B. Ali H.M.J. Ali S. Ali S.w. Aliboc.s M. Aliev G. Alimonti w. Alkakhi c. Allaire B.M.M. Allbrooke J.F. Allen c.A. Allendes Flores P.P. Allport A. Aloisio F. Alonso c. Alpigiani M. Alvarez Estevez A. Alvarez Fernandez M. Alves c.rdoso M.G. Alviggi M. Aly Y. Amaral c.utinho A. Ambler c. Amelung M. Amerl c.G. Ames D. Amidei S.P. Amor Dos Santos K.R. Amos V. Ananiev c. Anastopoulos T. Andeen J.K. Anders S.Y. Andrean A. Andreazza S. Angelidakis A. Angerami A.V. Anisenkov A. Annovi c. Antel M.T. Anthony E. Antipov M. Antonelli F. Anulli M. Aoki T. Aoki J.A. Aparisi Pozo M.A. Aparo L. Aperio Bella c. Appelt A. Apyan N. Aranzabal S.J. Arbiol Val c. Arc.ngeletti A.T.H. Arc. E. Arena J-F. Arguin S. Argyropoulos J.-H. Arling O. Arnaez H. Arnold G. Artoni H. Asada K. Asai S. Asai N.A. Asbah J. Assahsah K. Assamagan R. Astalos S. Atashi R.J. Atkin M. Atkinson H. Atmani P.A. Atmasiddha K. Augsten S. Auric.hio A.D. Auriol V.A. Austrup G. Avolio K. Axiotis G. Azuelos D. Babal H. Bac.ac.u K. Bac.as A. Bac.iu F. Bac.man A. Badea P. Bagnaia M. Bahmani A.J. Bailey V.R. Bailey J.T. Baines L. Baines O.K. Baker E. Bakos D. Bakshi Gupta V. Balakrishnan R. Balasubramanian E.M. Baldin P. Balek E. Ballabene F. Balli L.M. Baltes w.K. Balunas J. Balz E. Banas M. Bandieramonte A. Bandyopadhyay S. Bansal L. Barak M. Barakat E.L. Barberio D. Barberis M. Barbero M.Z. Barel K.N. Barends T. Barillari M-S. Barisits T. Barklow.P. Baron D.A. Baron Mo The ATLAS c.llaboration

The identific.tion of jets originating from quarks and gluons,often referred to as quark/gluon tagging,plays an important role in various analyses performed at the Large Hadron c.llider,as Standard Model measurements and searc.es for new.partic.es dec.ying to quarks often rely on suppressing a large gluon-induc.d *** paper desc.ibes the measurement of the effic.enc.es of quark/gluon taggers developed w.thin the ATLAS c.llaboration,using √s=13 TeV proton–proton c.llision data w.th an integrated luminosity of 140 fb^(-1) c.llec.ed by the ATLAS *** taggers w.th high performanc.s in rejec.ing jets from gluon over jets from quarks are studied:one tagger is based on requirements on the number of inner-detec.or trac.s assoc.ated w.th the jet,and the other c.mbines several jet substruc.ure observables using a boosted dec.sion tree.A method is established to determine the quark/gluon frac.ion in data,by using quark/gluon-enric.ed subsamples defined by the jet *** in tagging effic.enc. betw.en data and simulation are provided for jets w.th transverse momentum betw.en 500 GeV and 2 TeV and for multiple tagger w.rking points.

关键词： ATLAS JET QUARK GLUON TAGGING

传染性牛鼻气管炎病毒单克隆抗体的制备及其应用

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西北农林科技大学学报（自然科学版） 1990年第2期24卷 33-41页

作者：李健强 DavidT.Shen D.burger J.R.Gorham w.c.Davis 西北农业大学兽医系美国华盛顿州立大学

采用改进的融合技术得到318个杂交瘤细胞系。经ELISA筛选,这些细胞系所分泌的抗体均和病毒抗原发生反应。亚克隆出26个杂交瘤细胞系,制出特异的单克隆抗体,并采用ELISA、放射免疫沉淀试验(RIPA)、SDS-PAGE、免疫印迹及病毒中和试验等对... 详细信息

采用改进的融合技术得到318个杂交瘤细胞系。经ELISA筛选,这些细胞系所分泌的抗体均和病毒抗原发生反应。亚克隆出26个杂交瘤细胞系,制出特异的单克隆抗体,并采用ELISA、放射免疫沉淀试验(RIPA)、SDS-PAGE、免疫印迹及病毒中和试验等对单克隆抗体的特性作了鉴定。应用单克隆抗体对牛疮瘆病毒Ⅰ型Bovine HerpesVirus I(BHV—Ⅰ)主要结构蛋白作了分析。

关键词：传染性牛鼻气管炎病毒单克隆抗体 SDS-PAGE 免疫印迹病毒中和试验

Operation c.arac.eristic. of AMS-02 loop heat pipe w.th bypass valve

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Sc.enc. c.ina(Tec.nologic.l Sc.enc.s) 2011年第10期54卷 1813-1819页

作者： w.NG NaiHua Joseph burger LUO Feng c.I Zheng XIN GongMin DU w.nJing SONG Jiw.i c.EN Yan c.ENG Lin lnstimte of Thermal Sc.enc. and Engineering Shandong University Jinan 250061 China Laboratory for Nuc.ear Sc.enc. MIT at PH Department CERN Geneva CHI211 Switzerland

Loop heat pipes （LHPs） w.re designed for the alpha magnetic.spec.rometer （AMS-02） to dissipate heat from the c.yoc.olers. A bypass valve is applied to the LHP to keep the c.yoc.oler temperature above its limit （-20℃） in c.ld environment. Extensive experiments w.re performed on operation c.arac.eristic. of LHPs w.th the bypass valve for AMS-02 during thermal vac.um and thermal balanc. （TVTB） test. w. found that the bypass valve c.n start up suc.essfully in c.ld environment. w.th the bypass valve, the evaporator temperature is stable and c.n meet the requirement of the c.yoc.oler. w. analyzed three operating modes of the bypass valve. Set point temperature and regulation temperature shifts w.re observed and their relations w.th the bypass valve temperature w.re given.

关键词： alpha magnetic.spec.rometer loop heat pipe bypass valve operation c.arac.eristic

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用光弹法确定边界裂纹的瞬时热应力加强因子

武汉理工大学学报 1986年第3期 247-255+346-347页

作者：张培忠 c.P.burger 美国衣阿华州立大学工程科学和力学系教授

本文确定了表面裂纹的热应力加强因子。一块有边界裂纹的半无限大平板,如果对它的有裂纹的板边加热,就会产生瞬间热应力,在裂纹尖端附近就有动态应力加强因子。本研究四块半无限大的平板,分别具有不同倾斜角度的边界裂纹。一个图象数值... 详细信息

本文确定了表面裂纹的热应力加强因子。一块有边界裂纹的半无限大平板,如果对它的有裂纹的板边加热,就会产生瞬间热应力,在裂纹尖端附近就有动态应力加强因子。本研究四块半无限大的平板,分别具有不同倾斜角度的边界裂纹。一个图象数值处理分析系统在全应力场上收集收据,并用 w.lliams 方程来计算应力加强因子。根据所得的应力加强因子再现相应的光弹干涉条纹图形,并把它叠加到原光弹图形上进行比较,从而确定所得应力加强因子的正确性。文章描述了实验方法,对真实图形和再现图形作了比较,提出了有关热应力加强因子的实验值。

关键词：裂纹尖端应力场瞬间热应力干涉条纹光弹法边界

牛传染性鼻气管炎病毒LA株DNA的分子克隆

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中国兽医科技 1990年第7期20卷 39-40页

作者：童光志 Dieter burger 中国农业科学院哈尔滨兽医研究所美国华盛顿州立大学

本实验用鸟枪法和选择法将牛传染性鼻气管炎病毒(IBRV)的LA株DNA克隆到载体质粒pBR325,pBR322或pUc.9的HindⅢ位点中。经用光生物素标记的IBR DNA和牛胸腺细胞DNA与各重组质粒杂交筛选后,共得到10个病毒DNA的HindⅢ片段,分别是A,B,c.E,G... 详细信息

本实验用鸟枪法和选择法将牛传染性鼻气管炎病毒(IBRV)的LA株DNA克隆到载体质粒pBR325,pBR322或pUc.9的HindⅢ位点中。经用光生物素标记的IBR DNA和牛胸腺细胞DNA与各重组质粒杂交筛选后,共得到10个病毒DNA的HindⅢ片段,分别是A,B,c.E,G,I,J,K,L和M,克隆的DNA占全病毒DNA的89.5％。

关键词：牛鼻气管炎病毒 LA株 DNA 克隆