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Retrograde signaling in plants: A critical review focusing on the GUN pathway and beyond

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Plant Communications 2023年第1期4卷 304-323页

作者： Andreas S.Richter Thomas Nägele bernhard grimm Kerstin Kaufmann Michael Schroda Dario Leister Tatjana Kleine Physiology of Plant Metabolism Institute for BiosciencesUniversity of RostockAlbert-Einstein-Str.318059 RostockGermany Plant Evolutionary Cell Biology Faculty of BiologyLudwig-Maximilians-Universität München82152 Planegg-MartinsriedGermany Institute of Biology/Plant Physiology Humboldt-Universität zu BerlinPhilippstr.1310115 BerlinGermany Plant Cell and Molecular Biology Institute of BiologyHumboldt-Universität zu BerlinPhilippstr.1310115 BerlinGermany Molecular Biotechnology and Systems Biology TU KaiserslauternKaiserslauternGermany Plant Molecular Biology(Botany) Faculty of BiologyLudwig-Maximilians-Universität München82152 Planegg-MartinsriedGermany

Plastids communicate their developmental and physiological status to the nucleus via retrograde signaling,allowing nuclear gene expression to be adjusted *** during plastid biogenesis and responses of mature chloroplasts to environmental changes are designated“biogenic”and“operational”controls,respectively.A prominent example of the investigation of biogenic signaling is the screen for gun(genomes uncoupled)*** the first five gun mutants were identified 30 years ago,the functions of GUN proteins in retrograde signaling remain controversial,and that of GUN1 is hotly ***,we provide background information and critically discuss recently proposed concepts that address GUN-related signaling and some novel gun ***,considering heme as a candidate in retrograde signaling,we revisit the spatial organization of heme biosynthesis and export from *** this review focuses on GUN pathways,we also highlight recent progress in the identification and elucidation of chloroplast-derived signals that regulate the acclimation response in green algae and ***,stress-induced accumulation of unfolded/misassembled chloroplast proteins evokes a chloroplast-specific unfolded protein response,which leads to changes in the expression levels of nucleus-encoded chaperones and proteases to restore plastid protein *** also address the importance of chloroplast-derived signals for activation of flavonoid biosynthesis leading to production of anthocyanins during stress acclimation through sucrose non-fermenting 1-related protein kinase ***,a framework for identification and quantification of intercompartmental signaling cascades at the proteomic and metabolomic levels is provided,and we discuss future directions of dissection of organelle-nucleus communication.

关键词： chloroplast chloroplast unfolded protein response genomes uncoupled gun retrograde signaling subcellular proteomes subcellular metabolomes

The Potato Sucrose Transporter StSUT1 Interacts with a DRM-Associated Protein Disulfide Isomerase

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Molecular Plant 2012年第1期5卷 43-62页

作者： Undine Krugel Hong-Xia He Konstanze Gier Jana Reins Izabela Chincinska bernhard grimm Waltraud X. Schulze Christina Kuhn Institute of Biology Department of Plant Physiology Humboldt University 10115 Berlin Germany Max Planck Institute of Molecular Plant Physiology Am MGhlenberg 1 14476 Potsdam-Golm Germany

Organization of proteins into complexes is crucial for many cellular functions. Recently, the SUT1 protein was shown to form homodimeric complexes, to be associated with lipid raft-like microdomains in yeast as well as in plants and to undergo endocytosis in response to brefeldin A. We therefore aimed to identify SUTl-interacting proteins that might be involved in dimerization, endocytosis, or targeting of SUT1 to raft-like microdomains. Therefore, we identified potato membrane proteins, which are associated with the detergent-resistant membrane （DRM） fraction. Among the proteins identified, we clearly confirmed StSUT1 as part of DRM in potato source leaves. We used the yeast two-hybrid split ubiq- uitin system （SUS） to systematically screen for interaction between the sucrose transporter StSUT1 and other membrane- associated or soluble proteins in vivo. The SUS screen was followed by immunoprecipitation using affinity-purified StSUTl-specific peptide antibodies and mass spectrometric analysis of co-precipitated proteins. A large overlap was ob- served between the StSUTl-interacting proteins identified in the co-immunoprecipitation and the detergent-resistant membrane fraction. One of the SUTl-interacting proteins, a protein disulfide isomerase （PDI）, interacts also with other sucrose transporter proteins. A potential role of the PDI as escort protein is discussed.

关键词： Protein-protein interactions phloem proteins vesicle trafficking endocytosis.

Studies on Differential Nuclear Translocation Mechanism and Assembly of the Three Subunits of the Arabidopsis thaliana Transcription Factor NF-Y

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Molecular Plant 2012年第4期5卷 876-888页

作者： Dieter Hackenberg Yanfang Wu Andrea Voigt Robert Adams Peter Schramm bernhard grimmI Institute of Biology/Plant Physiology Humboldt University Philippstr. 13 Building 12 10115 Berlin Germany

The eukaryotic transcription factor NF-Y consists of three subunits （A, B, and C）, which are encoded in Ara- bidopsis thaliana in multigene families consisting of 10, 13, and 13 genes, respectively. In principle, all potential combi- nations of the subunits are possible for the assembly of the heterotrimeric complex. We aimed at assessing the probability of each subunit to participate in the assembly of NF-Y. The evaluation of physical interactions among all members of the NF-Y subunit families indicate a strong requirement for NF-YB/NF-YC heterodimerization before the entire complex can be accomplished. By means of a modified yeast two-hybrid system assembly of all three subunits to a heterotrimeric complex was demonstrated. Using GFP fusion constructs, NF-YA and NF-YC localization in the nucleus was demonstrated, while NF- YB is solely imported into the nucleus as a NF-YC-associated heterodimer NF-YC. This piggyback transport of the two Arabidopsis subunits differs from the import of the NF-Y heterotrimer of heterotrophic organisms. Based on a peptide structure model of the histone-fold-motifs, disulfide bonding among intramolecular conserved cysteine residues of NF-YB, which is responsible for the redox-regulated assembly of NF-YB and NF-YC in human and Aspergillus nidulans, can be excluded for Arabidopsis NF-YB.

关键词： gene expression transcriptional control and transcription factors nuclear translocation protein-proteininteraction.

Recycling of Solanum Sucrose Transporters Expressed in Yeast, Tobacco, and in Mature Phloem Sieve Elements

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Molecular Plant 2010年第6期3卷 1064-1074页

作者： Johannes Liesche Hong-Xia He bernhard grimm Alexander Schulz Christina Kuhn Humboldt University Institute of Biology Plant Physiology Philippstraβe 13 Building 12 10115 Berlin Germany Plant Physiology and Anatomy Laboratory Department of Plant Biology Faculty of Life Sciences Copenhagen University Thorvaldsensvej 40 DK-1871 Frederiksberg C Denmark

The plant sucrose transporter SUT1 （from Solanum tuberosum, S. lycopersicum, or Zea mays） exhibits redoxdependent dimerization and targeting if heterologously expressed in S. cerevisiae （Krtigel et al., 2008）. It was also shown that SUT1 is present in motile vesicles when expressed in tobacco cells and that its targeting to the plasma membrane is reversible. StSUT1 is internalized in the presence of brefeldin A （BFA） in yeast, plant cells, and in mature sieve elements as confirmed by immunolocalization. These results were confirmed here and the dynamics of intracellular SUT1 localization were further elucidated. Inhibitor studies revealed that vesicle movement of SUT1 is actin-dependent. BFA-mediated effects might indicate that anterograde vesicle movement is possible even in mature sieve elements, and could involve components of the cytoskeleton that were previously thought to be absent in SEs. Our results are in contradiction to this old dogma of plant physiology and the potential of mature sieve elements should therefore be re-evaluated. In addition, SUT1 internalization was found to be dependent on the plasma membrane lipid composition. SUT1 belongs to the detergent-resistant membrane （DRM） fraction in planta and is targeted to membrane raft-like microdomains when expressed in yeast （Kr（igel et al,, 2008）, Here, SUT1-GFP expression in different yeast mutants, which were unable to perform en- docytosis and/or raft formation, revealed a strong link between SUT1 raft localization, the sterol composition and mem- brane potential of the yeast plasma membrane, and the capacity of the SUT1 protein to be internalized by endocytosis. The results provide new insight into the regulation of sucrose transport and the mechanism of endocytosis in plant cells.

关键词： Transporters membrane proteins phloem physiology protein targeting potato.

Intracellular Communication

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Molecular Plant 2014年第7期7卷 1071-1074页

作者： bernhard grimm, Kayatoon Dehesh, Lixin Zhang Dario Leister Guest Editors

Gene expression of the nuclear, plastid, and mitochon- drial genomes in plants is mutually dependent and highly coordinately regulated. This ensures adequate synthesis of proteins functioning in common protein complexes for organellar gene expression and energy-transducing activities in chloroplasts and mitochondria. The concept of intracellular communication includes an anterograde and retrograde signaling network between nucleus and the two organelles, enabling this interactive exchange of information essential for cellular hemostasis. By definition, the intracellular communication is based on the inter-orga- nellar reciprocity whereby the transcriptional activities in the nucleus are regulated in part by signaling pathways derived from plastids and mitochondria （retrograde sign- aling）, while the organellar gene expression is controlled by information received form the nucleus （anterograde signaling）.

关键词：蛋白质类基因表达细胞器线粒体信息交流叶绿体胰岛素植物

Pea Chloroplast Thioredoxin F Activates Magnesium Chelatase Activity Through Redox Regulation of Magnesium Chelatase I Subunit

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Pea Chloroplast Thioredoxin F Activates Magnesium Chelatase ...

Co-chaperoning of chlorophyll and carotenoid biosynthesis by ORANGE family proteins in plants

第十二届全国植物基因组学大会

作者： Rothbart Maxi bernhard grimm

Mg-chelatase plays an essential role in chlorophyll synthesizing pathway to catalyze the reaction of Mg2 insertion into protoporphyrin ***,Arabidopsis Mg-chelatase I subunit isoform 1(CHLI1) is reported to be a target protein of *** order to further study of the thioredoxin-dependent regulation of Mg-chelatase,we first isolated the cDNA sequence encoding pea CHLI and analyzed the enzymatic activation of pea thioredoxin f(TRX-f) for the ATPase activity of pea recombinant CHLI and the chelatase activity of reconstituted *** reduced state of pea TRX-f succeeds in enhancing the ATPase activity of pea recombinant CHLI and activating the chelatase activity of reconstituted ***,we performed the yeast two-hybrid assay and BiFC *** a result,the physical interaction only occurs between

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Molecular Plant 2023年第6期16卷 1048-1065页

作者： Tianhu Sun Peng Wang Sombir Rao Xuesong Zhou Emalee Wrightstone Shan Lu Hui Yuan Yong Yang Tara Fish Theodore Thannhauser Jiping Liu Michael Mazourek bernhard grimm Li Li Robert W.Holley Center for Agriculture and Health USDA-ARSCornell UniversityIthacaNY 14853USA Plant Breeding and Genetics Section School of Integrative Plant ScienceCornell UniversityIthacaNY 14853UA Department of Plant Physiology Institute of BiologyHumboldt-Universitat zu Berlin10115 BerlinGermany School of Biological Sciences The University of Hong KongPokfulam RoadHong Kong 999077China State Key Laboratory of Pharmaceutical Biotechnology School of Life SciencesNanjing UniversityNanjng 210023China

Chlorophylls and carotenoids are essential photosynthetic *** spatiotemporally coordinate the needs of chlorophylls and carotenoids for optimal photosynthesis and fitness in response to diverse environmental and developmental ***,how the biosynthesis pathways of these two pigments are coordinated,particularly at posttranslational level to allow rapid control,remains largely ***,we report that the highly conserved ORANGE(OR)family proteins coordinate both pathways via posttranslationally mediating the first committed enzyme in each *** demonstrate that OR family proteins physically interact with magnesium chelatase subunit I(CHLI)in chlorophyll biosynthesis pathway in addition to phytoene synthase(PSY)in carotenoid biosynthesis pathway and concurrently stabilize CHLI and PSY *** show that loss of OR genes hinders both chlorophyll and carotenoid biosynthesis,limits light-harvesting complex assembly,and impairs thylakoid grana stacking in *** of OR safeguards photosynthetic pigment biosynthesis and enhances thermotolerance in both Arabidopsis and tomato *** findings establish a novel mechanism by which plants coordinate chlorophyll and carotenoid biosynthesis and provide a potential genetic target to generate climate-resilient crops.

关键词： photosynthetic pigments chlorophylls carotenoids OR family proteins CHLl PSY thermotolerance

Post-transcriptional regulation of sucrose transporters in solanaceous plants

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Post-transcriptional regulation of sucrose transporters in s...

Induced Deactivation of Genes Encoding Chlorophyll Biosynthesis Enzymes Disentangles Tetrapyrrole- Mediated Retrograde Signaling

第十一届全国植物基因组学大会

作者： Izabela Chincinska bernhard grimm Christina Kühn Humboldt Univeristy of Berlin the department of plant physiologyPhilippstr.13 Haus1210115Germany

Sucrose Transporters(SUTs,also called Sucrose Carriers-SUCs) are membrane proteins,located in the plasma membrane that function in loading sucrose into phloem(specialized vascular tissue) and in sucrose uptake into si...

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Molecular Plant 2014年第7期7卷 1211-1227页

作者： Hagen Schlicke Annabel Salinas Hartwig Vivien Firtzlaff Andreas S. Richter , Christine Glasser Klaus Maier Iris Finkemeier bernhard grimm Institute of Biology/Plant Physiology Humboldt University Berlin Philippstr. 13 Building 12 D 10115 Berlin Germany Helmholtz Zentrum Monchen Deutsches Forschungszentrum for Gesundheit und Umwelt (GmbH) Ingolstadter Landstr. 1 85764 Neuherberg Germany Max-Planck-lnstitute for Plant Breeding Research. Plant Proteomics and Mass Spectrometry Group Carl-von-Linne Weg 10 50829 Cologne Germany

In photosynthetic organisms, tetrapyrrole-mediated retrograde signals are proposed to contribute to a bal- anced nuclear gene expression （NGE） in response to metabolic activity in chloroplasts. We followed an experimental short- term approach that allowed the assessment of modified NGE during the first hours of specifically modified enzymatic steps of the Mg branch of tetrapyrrole biosynthesis, when pleiotropic effects of other signals can be avoided. In response to 24-h-induced silencing of CHLH, CHLM, and CHL27 encoding the CHLH subunit of Mg chelatase, the Mg protoporphyrin methyltransferase and Mg protoporphyrin monomethylester cyclase, respectively, deactivated gene expression rapidly led to reduced activity of the corresponding enzymes and altered Mg porphyrin levels. But NGE was not substantially altered. When these three genes were continuously inactivated for up to 4 d, changes of transcript levels of nuclear genes were determined. CHL27 silencing for more than 24h results in necrotic leaf lesions and modulated transcript levels of oxidative stress-responsive and photosynthesis-associated nuclear genes （PhANGs）. The prolonged deactivation of CHLH and CHLM results in slightly elevated transcript levels of PhANGs and tetrapyrrole-associated genes. These time-resolved studies indicate a complex scenario for the contribution of tetrapyrrole biosynthesis on NGE mediated by IO2-induced signaling and feedback-regulated ALA synthesis.

关键词： plastid signal transcription analysis retrograde signal tetrapyrrole metabolism Mg protoporphyrin.