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植物分类与资源学报 2012年第2期34卷 150-150页

作者： zhang li curator,herbarium(SZG),fairy lake botanical garden shenzhen & chinese academy of sciences shenzhen 518004,guangdong,china curator Herbarium(SZG) Fairy Lake Botanical Garden Shenzhen & Chinese Academy of Sciences Shenzhen 518004 Guangdong China

Kürschner,H.&***,Mosses and Hornworts of Southwest Asia(Marchantiophyta,Bryophyta,Anthocerotophyta).Nova Hedwigia,***,Stuttgart.2011.240pages,9figures,1table,

关键词：摘要编辑部编辑工作读者

Protophyllocladoxylon jingyuanense ***.,a Gymnospermous Wood of the Serpukhovian(Late Mississippian) from Gansu,Northwest china

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Acta Geologica Sinica(English Edition) 2010年第2期84卷 257-268页

作者： zhang Yi WANG Jun liU Lujun li Nan Paleontological Institute of Shenyang Normal University Shenyang 110034 China Nanjing Institute of Geology and Paleontology Chinese Academy of Sciences Nanjing 210008 China shenzhen Fair lake botanical garden Shenzhen 518004 China

A new species of gymnospermous fossil wood, Protophyllocladoxylon jingyuanense sp. nov., is described from the lower part of the Tsingyuan Formation （Serpukhovian/Late Mississippian）, near the coal mine of Ciyao, Gansu, northwestern china. The specimen is preserved only in silicified secondary xylem, while growth rings are absent. Pits in radial tracheidal walls are araucaroid in type, uniseriate, occasionally biseriate. Xylem rays are homogeneous, uniseriate, occasionally biseriate. Cross-field pits are simple, large, one to two in number. Axial parenchyma is absent. The anatomical characters and geographic distribution of Protophyllocladoxylon woods through geological ages are documented. Those species with axial parenchyma and without growth rings live in warm climate, whereas the species without axial parenchyma and with growth rings are present either in warm or cool climate. The ideal living climate for Protophyllocladoxylon woods is warm and wet. Our new species, as a fossil wood of Early Carboniferous, is likely the earliest known species of Protophyllocladoxylon.

关键词： Protophyllocladoxylonjingyuanense growth rings axial parenchyma climate,

Antidiabetic activity of Callicarpa nudiflora extract in type 2 diabetic rats via activation of the AMPK-ACC pathway

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Asian Pacific Journal of Tropical Biomedicine 2019年第11期9卷 456-466页

作者： Wen-Yu Ma Le-Ping Ma Bo Yi Min zhang Shi-Xiu Feng li-Ping Tian Key Laboratory of Xinjiang Phytomedicine Resource and Utilization for Ministry of Education School of PharmacyShihezi UniversityShihezi 832000China Key Laboratory of South Subtropical Plant Diversity Fairy Lake Botanical GardenShenzhen&Chinese Academy of SciencesShenzhen 518004China Department of Pharmacy 928 Hospital of PLAHaikou 571159China

Objective:To evaluate the antidiabetic effect of Callicarpa nudiflora extract in streptozotoc-ininduced diabetic ***:The chemical constituents in Callicarpa nudiflora extract were identified by *** nudiflora extract(0.15 and 0.3 g/kg)was orally administered to streptozotocin-induced diabetic rats for 42 *** effects of Callicarpa nudiflora extract on body weight,blood glucose,serum insulin,total cholesterol,triglyceride,LDL-C and HDL-C were investigated,and its effect on liver and pancreatic pathology was assessed by histopathological ***,the expression levels of adenosine 5’-monophosphate-activated protein kinase(AMPK),glucose transporter type 4(GLUT4),phospho-AMPK/AMPK,and p-acetylcoA carboxylase(P-ACC)/ACC in the skeletal muscles and liver were determined by reverse transcription-polymerase chain reaction,Western blotting,and ***:A total of 34 compounds,including 8 iridoids,14 phenylpropanoids,and 12 flavonoids,were identified from Callicarpa nudiflora *** nudiflora extract significantly reduced blood glucose and significantly restored all other biochemical parameters to near normal levels,including serum insulin,total cholesterol,triglyceride,LDL-C,and *** nudiflora extract improved insulin resistance and reversed the damage in the liver and pancreas caused by ***,Callicarpa nudiflora extract increased the expression levels of phospho-AMPK,GLUT4,P-ACC,and insulin receptor substrate-1 and decreased the expression level of PPAR r in diabetic ***:Callicarpa nudiflora extract improved oral glucose tolerance,lipid metabolism,insulin resistance,and reversed the diabetes-related damage in the liver and pancreas by activating the AMPK-ACC pathway.

关键词： Callicarpa nudiflora extract Diabetes mellitus Insulin resistance AMPK-ACC GLUT4

Major episodes of horizontal gene transfer drove the evolution of land plants

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Molecular Plant 2022年第5期15卷 857-871页

作者： Jianchao Ma Shuanghua Wang Xiaojing Zhu Guiling Sun Guanxiao Chang linhong li Xiangyang Hu Shouzhou zhang Yun Zhou Chun-Peng Song Jinling Huang State Key Laboratory of Crop Stress Adaptation and Improvement School of Life SciencesHenan UniversityKaifeng 475004China Key Laboratory for Plant Diversity and Biogeography of East Asia Yunnan Key Laboratory for Fungal Diversity and Green DevelopmentKunming Institute of BotanyChinese Academy of SciencesKunming 650201China Department of Entomology China Agricultural UniversityBeijing 100193China Shanghai Key Laboratory of Bio-Energy Crops School of Life SciencesShanghai UniversityShanghai 200444China fairy lake botanical garden Shenzhen&Chinese Academy of SciencesShenzhen 518004China Department of Biology East Carolina UniversityGreenvilleNC 27858USA

How horizontal gene transfer(HGT)has contributed to the evolution of animals and plants remains a major *** recent progress,defining the overall scale and pattern of HGT events in land plants has been largely *** this study,we performed systematic analyses for acquired genes in different plant groups and throughout land plant *** found that relatively recent HGT events occurred in char-ophytes and all major land plant groups,but their frequency declined rapidly in seed *** major ep-isodes of HGT events occurred in land plant evolution,corresponding to the early evolution of strepto-phytes and the origin of land plants,***,a vast majority of the genes acquired in the two episodes have been retained in descendant groups,affecting numerous activities and processes of land *** analyzed some of the acquired genes involved in stress responses,ion and metabolite transport,growth and development,and specialized metabolism,and further assessed the cumulative ef-fects of HGT in land plants.

关键词： plant evolution adaptation streptophytes cumulative effect stress response growth and development

Diel dynamics of multi-omics in elkhorn fern provide new insights into weak CAM photosynthesis

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Plant Communications 2023年第5期4卷 208-222页

作者： Cheng li Wenjie Huang Xiaoxu Han Guohua Zhao Wenyang zhang Weijun He Bao Nie Xufeng Chen Taijie zhang Wenhui Bai Xiaopeng zhang Jingjing He Cheng Zhao Alisdair RFernie Timothy JTschaplinski Xiaohan Yang Shijuan Yan li Wang shenzhen Branch Guangdong Laboratory for Lingnan Modern AgricultureGenome Analysis Laboratory of the Ministry of AgricultureAgricultural Genomics Institute at ShenzhenChinese Academy of Agricultural SciencesShenzhenChina guangdong Key Laboratory for Crop Germplasm Resources Preservation and Utilization Agro-biological Gene Research CenterGuangdong Academy of Agricultural SciencesGuangzhouChina Biosciences Division Oak Ridge National LaboratoryOak RidgeTN 37831USA The Center for Bioenergy Innovation Oak Ridge National LaboratoryOak RidgeTN 37831USA Max Planck Institute of Molecular Plant Physiology Am Muhlenberg 114476 Potsdam-GolmGermany Key Laboratory of Southern Subtropical Plant Diversity Fairy Lake Botanical GardenShenzhen&Chinese Academy of ScienceShenzhenChina Institute of Plant Protection Guangdong Academy of Agricultural SciencesKey Laboratory of Green Prevention and Control on Fruits and Vegetables in South ChinaMinistry of Agriculture and Rural AffairsGuangdong Provincial Key Laboratory of High Technology for Plant ProtectionGuangzhouChina Kunpeng Institute of Modern Agriculture at Foshan Chinese Academy of Agricultural SciencesFoshanChina

Crassulacean acid metabolism(CAM)has high water-use efficiency(WUE)and is widely recognized to have evolved from C3 *** plant lineages have convergently evolved CAM,but the molecular mechanism that underlies C3-to-CAM evolution remains to be *** bifurcatum(elkhorn fern)provides an opportunity to study the molecular changes underlying the transition from C3 to CAM photosynthesis because both modes of photosynthesis occur in this species,with sporotrophophyll leaves(SLs)and cover leaves(CLs)performing C3 and weak CAM photosynthesis,***,we report that the physiological and biochemical attributes of CAM in weak CAM-performing CLs differed from those in strong CAM *** investigated the diel dynamics of the metabolome,proteome,and transcriptome in these dimorphic leaves within the same genetic background and under identical environmental *** found that multi-omic diel dynamics in *** exhibit both tissue and diel *** analysis revealed temporal rewiring of biochemistry relevant to the energy-producing pathway(TCA cycle),CAM pathway,and stomatal movement in CLs compared with *** also confirmed that PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE(PPCK)exhibits convergence in gene expression among highly divergent CAM *** regulatory network analysis identified candidate transcription factors regulating the CAM pathway and stomatal *** together,our results provide new insights into weak CAM photosynthesis and new avenues for CAM bioengineering.

关键词： Platycerium bifurcatum crassulacean acid metabolism multi-omics transcription factor PPCK convergent evolution

Haplotype-resolved genome of diploid ginger (Zingiber officinale) and its unique gingerol biosynthetic pathway

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Horticulture Research 2021年第1期8卷 2546-2558页

作者： Hong-Lei li lin Wu Zhaoming Dong Yusong Jiang Sanjie Jiang Haitao Xing Qiang li Guocheng liu Shuming Tian zhangyan Wu Bin Wu Zhexin li Ping Zhao Yan zhang Jianmin Tang Jiabao Xu Ke Huang Xia liu Wenlin zhang Qinhong liao Yun Ren Xinzheng Huang Qingzhi li Chengyong li Yi Wang Baskaran Xavier-Ravi Honghai li Yang liu Tao Wan Qinhu liu Yong Zou Jianbo Jian Qingyou Xia Yiqing liu College of Landscape Architecture and life Science/Institute of Special Plants Chongqing University of Arts and SciencesYongchuanChongqingChina Engineering Research Center for Special Plant Seedlings of Chongqing Chongqing University of Arts and SciencesYongchuanChongqingChina State Key Laboratory of Silkworm Genome Biology Biological Science Research CenterSouthwest UniversityBeibeiChongqingChina BGI Genomics BGI-ShenzhenShenzhenGuangdongChina College of Biology and Food Engineering Chongqign Three Gorges UniversityWanzhouChongqingChina Department of Entomology and MOAKey Lab of Pest Monitoring and Green Management College of Plant ProtectionChina Agricultural UniversityHaidianBeijingChina Jinan Second Agricultural Science Research Institute JinanShandongChina Savari Research Foundation Mela Ilandai KulamTamil NaduIndia Institute of Advanced Interdisciplinary Studies Chongqing UniversityChongqingChina fairy lake botanical garden and chinese academy of sciences ShenzhenGuangdongChina Ningyang Science and Technology Bureau TaianShandongChina College of Horticulture and gardening Yangtze UniversityJingzhouHubeiChina

Ginger(Zingiber officinale),the type species of Zingiberaceae,is one of the most widespread medicinal plants and ***,we report a high-quality,chromosome-scale reference genome of ginger‘Zhugen’,a traditionally cultivated ginger in Southwest china used as a fresh vegetable,assembled from PacBio long reads,Illumina short reads,and high-throughput chromosome conformation capture(Hi-C)*** ginger genome was phased into two haplotypes,haplotype 1(1.53 Gb with a contig N50 of 4.68 M)and haplotype 0(1.51 Gb with a contig N50 of 5.28 M).Homologous ginger chromosomes maintained excellent gene pair *** 17,226 pairs of allelic genes,11.9%exhibited differential expression between *** on the results of ginger genome sequencing,transcriptome analysis,and metabolomic analysis,we proposed a backbone biosynthetic pathway of gingerol analogs,which consists of 12 enzymatic gene families,PAL,C4H,4CL,CST,C3’H,C3OMT,CCOMT,CSE,PKS,AOR,DHN,and *** analyses also identified the likely transcription factor networks that regulate the synthesis of gingerol ***,this study serves as an excellent resource for further research on ginger biology and breeding,lays a foundation for a better understanding of ginger evolution,and presents an intact biosynthetic pathway for species-specific gingerol biosynthesis.

关键词： backbone maintained analogs

The genome of Magnolia biondii Pamp. provides insights into the evolution of Magnoliales and biosynthesis of terpenoids

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Horticulture Research 2021年第1期8卷 552-564页

作者： Shanshan Dong Min liu Yang liu Fei Chen Ting Yang Lu Chen Xingtan zhang Xing Guo Dongming Fang linzhou li Tian Deng zhangxiu Yao Xiaoan Lang Yiqing Gong Ernest Wu Yaling Wang Yamei Shen Xun Gong Huan liu Shouzhou zhang Laboratory of Southern Subtropical Plant Diversity Fairy Lake Botanical GardenShenzhen&Chinese Academy of SciencesShenzhen 518004China State Key Laboratory of Agricultural Genomics BGI-ShenzhenShenzhen 518083China Nanjing Forestry University Nanjing 210037China Fujian Agriculture and Forestry University Fuzhou 350000China University of British Columbia Vancouver BCCanada Xi’an botanical garden Xi’an 710061China Zhejiang Agriculture and Forestry University Hangzhou 311300China Kunming botanical garden Chinese Academy of SciencesKunming 650201China Department of Biology University of CopenhagenDK-2100 CopenhagenDenmark

Magnolia biondii Pamp.(Magnoliaceae,magnoliids)is a phylogenetically,economically,and medicinally important ornamental tree species widely grown and cultivated in the north-temperate regions of *** the genome sequence of *** would help resolve the phylogenetic uncertainty of magnoliids and improve the understanding of individual trait evolution within the Magnolia *** assembled a chromosome-level reference genome of *** using~67,~175,and~154Gb of raw DNA sequences generated via Pacific Biosciences single-molecule real-time sequencing,10X Genomics Chromium,and Hi-C scaffolding strategies,*** final genome assembly was~2.22Gb,with a contig N50 value of 269.11 kb and a BUSCO complete gene percentage of 91.90%.Approximately 89.17%of the genome was organized into 19 chromosomes,resulting in a scaffold N50 of *** genome contained 47,547 protein-coding genes,accounting for 23.47%of the genome length,whereas 66.48%of the genome length consisted of repetitive *** confirmed a WGD event that occurred very close to the time of the split between the Magnoliales and *** enrichment of the Magnolia-specific and expanded gene families highlighted genes involved in the biosynthesis of secondary metabolites,plant–pathogen interactions,and responses to stimuli,which may improve the ecological fitness and biological adaptability of the *** analyses revealed a sister relationship of magnoliids and Chloranthaceae,which are sister to a clade comprising monocots and *** genome sequence of *** could lead to trait improvement,germplasm conservation,and evolutionary studies on the rapid radiation of early angiosperms.

关键词： evolution sister resolve

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非洲菊原生质体制备及瞬时转化系统的建立

植物学报 2017年第4期52卷 511-519页

作者：宋爱华张文斌孙姝兰李凌飞王小菁华南师范大学生命科学学院广东省植物发育生物工程重点实验室广州510631 深圳市中国科学院仙湖植物园深圳市南亚热带植物多样性重点实验室深圳518004

非洲菊(Gerbera hybrida)已成为研究复杂花序进化与发育的模式植物。以非洲菊无菌组培苗叶片为材料,分析不同浓度纤维素酶及离析酶配比对非洲菊原生质体提取效率的影响,建立了稳定、高效的非洲菊原生质体提取与瞬时转化体系。结果表明,... 详细信息

非洲菊(Gerbera hybrida)已成为研究复杂花序进化与发育的模式植物。以非洲菊无菌组培苗叶片为材料,分析不同浓度纤维素酶及离析酶配比对非洲菊原生质体提取效率的影响,建立了稳定、高效的非洲菊原生质体提取与瞬时转化体系。结果表明,以2.0%纤维素酶+0.3%离析酶组合,在0.4 mol·L^(–1)甘露醇溶液中,酶解4小时,酶解温度为25°C,得到产量高达2.2×10~7个·g^(–1) FW及活力较高的原生质体,可直接用于植物蛋白亚细胞定位和蛋白间相互作用实验,转化效率达80%。该研究建立了非洲菊原生质体制备和瞬时转化体系,为非洲菊基因功能研究奠定重要的技术基础。

关键词：非洲菊原生质体制备瞬时表达蛋白互作

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中国藓类植物一新记录种——多齿悬藓

植物科学学报 2020年第5期38卷 604-608页

作者：田雅娴任昭杰娜仁高娃左勤赵遵田张力山东师范大学生命科学学院逆境植物重点实验室济南250014 深圳市中国科学院仙湖植物园深圳市南亚热带植物多样性重点实验室深圳518004 山东博物馆自然部济南250014 中国科学院植物研究所系统学与进化植物学国家重点实验室北京100093 中国科学院大学北京100049

报道了产自西藏墨脱的中国悬藓属新记录种——多齿悬藓(Barbella horridula Broth.)。多齿悬藓曾报道产于印度尼西亚(苏门答腊岛)和菲律宾(吕宋岛),经与模式标本比较,该标本仅在叶中部细胞和角细胞的分化程度上与模式标本略有不同。该... 详细信息

报道了产自西藏墨脱的中国悬藓属新记录种——多齿悬藓(Barbella horridula Broth.)。多齿悬藓曾报道产于印度尼西亚(苏门答腊岛)和菲律宾(吕宋岛),经与模式标本比较,该标本仅在叶中部细胞和角细胞的分化程度上与模式标本略有不同。该种的茎叶为狭卵状披针形,叶中部细胞较长及边缘具明显的齿,可与同属国内其它种相区别。该文对多齿悬藓的形态特征进行了详细描述并提供了显微形态照片,编制了中国悬藓属植物分种检索表。

关键词：藓类蔓藓科悬藓属新记录西藏墨脱中国

Notes for genera:Ascomycota

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Fungal Diversity 2017年第5期86卷 1-594页

作者： Nalin N.Wijayawardene Kevin D.Hyde Kunhiraman C.Rajeshkumar David L.Hawksworth Hugo Madrid Paul M.Kirk Uwe Braun Rajshree V.Singh Pedro W.Crous Martin Kukwa Robert Lücking Cletus P.Kurtzman Andrey Yurkov Danny Haelewaters Andre´Aptroot H.Thorsten Lumbsch Einar Timdal Damien Ertz Javier Etayo Alan J.L.Phillips Johannes Z.Groenewald Moslem Papizadeh Laura Selbmann Monika C.Dayarathne Gothamie Weerakoon E.B.Gareth Jones Satinee Suetrong Qing Tian Rafael F.Castanda-Ruiz Ali H.Bahkali Ka-Lai Pang Kazuaki Tanaka Dong Qin Dai Jariya Sakayaroj Martina Hujslová Lorenzo Lombard Belle D.Shenoy Ave Suija Sajeewa S.N.Maharachchikumbura Kasun M.Thambugala Dhanushka N.Wanasinghe Bharati O.Sharma Subhash Gaikwad Gargee Pandit Laura Zucconi Silvano Onofri Eleonora Egidi Huzefa A.Raja Rampai Kodsueb Marcela E.S.Caceres Sergio Perez-Ortega Patrícia O.Fiuza Josiane Santana Monteiro Larissa N.Vasilyeva Roger G.Shivas Maria Prieto Mats Wedin Ibai Olariaga Adebola Azeez Lateef Yamini Agrawal Seyed Abolhassan Shahzadeh Fazeli Mohammad Ali Amoozegar Guo Zhu Zhao Walter P.Pfliegler Gunjan Sharma Magdalena Oset Mohamed A.Abdel-Wahab Susumu Takamatsu Konstanze Bensch Nimali Indeewari de Silva AndréDe Kesel Anuruddha Karunarathna Saranyaphat Boonmee Donald H.Pfister Yong-Zhong Lu Zong-Long Luo Nattawut Boonyuen Dinushani A.Daranagama Indunil C.Senanayake Subashini C.Jayasiri Milan C.Samarakoon Xiang-Yu Zeng Mingkwan Doilom Luis Quijada Sillma Rampadarath Gabriela Heredia Asha J.Dissanayake Ruvishika S.Jayawardana Rekhani H.Perera li Zhou Tang Chayanard Phukhamsakda Margarita Hernańdez-Restrepo Xiaoya Ma Saowaluck Tibpromma Luis F.P.Gusmao Darshani Weerahewa Samantha C.Karunarathna Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Mushroom Research Foundation 128 M.3 Ban Pa Deng T.Pa PaeA.Mae TaengChiang Mai 50150Thailand National Fungal Culture Collection of India(NFCCI) Biodiversity and Palaeobiology(Fungi)GroupAgharkar Research InstitutePuneMaharashtra 411004India Royal Botanic gardens KewRichmondSurrey TW93DSUK Department of life sciences The Natural History MuseumCromwell RoadLondon SW75BDUK Jilin Agricultural University Changchun 130118JilinPeople’s Republic of China Centro de Geno´mica y Bioinforma´tica Facultad de CienciasUniversidad Mayor de ChileCamino La Pira´mide 5750HuechurabaSantiagoChile Martin-Luther-Universita¨t Institut fu¨r BiologieBereich Geobotanik und Botanischer GartenHerbariumNeuwerk 2106099 Halle(Saale)Germany Westerdijk Fungal Biodiversity Institute Uppsalalaan 83584 CT UtrechtThe Netherlands Department of Plant Taxonomy and Nature Conservation Faculty of BiologyUniversity of Gdan´skWita Stwosza 5980-308 Gdan´skPoland Botanic garden and botanical Museum Königin-Luise-Str.6-814195 BerlinGermany Mycotoxin Prevention and Applied Microbiology Research Unit National Center for Agricultural Utilization ResearchAgricultural Research ServiceU.S.Department of AgriculturePeoriaIL 61604USA Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures Inhoffenstraße 7B38124 BrunswickGermany Farlow Reference library and herbarium of Cryptogamic Botany Harvard University22 Divinity AvenueCambridgeMA 02138USA Department of Organismic and Evolutionary Biology Harvard University22 Divinity AvenueCambridgeMA 02138USA ABL herbarium G.v.d.Veenstraat 1073762 XK SoestThe Netherlands Science&Education The Field Museum1400

Knowledge of the relationships and thus the classification of fungi,has developed rapidly with increasingly widespread use of molecular techniques,over the past 10–15 years,and continues to *** genera have been found to be polyphyletic,and their generic concepts have subsequently been *** names have thus been introduced for species which are phylogenetically distinct from the type species of particular *** ending of the separate naming of morphs of the same species in 2011,has also caused changes in fungal generic *** order to facilitate access to all important changes,it was desirable to compile these in a single *** present article provides a list of generic names of Ascomycota(approximately 6500 accepted names published to the end of 2016),including those which are *** and summaries of the changes since the last edition of‘Ainsworth&Bisby’s Dictionary of the Fungi’in 2008 are *** notes include the number of accepted species,classification,type species(with location of the type material),culture availability,life-styles,distribution,and selected publications that have appeared since *** work is intended to provide the foundation for updating the ascomycete component of the"Without prejudice list of generic names of Fungi"published in 2013,which will be developed into a list of protected generic *** will be subjected to the XIXth International botanical Congress in shenzhen in July 2017 agreeing to a modification in the rules relating to protected lists,and scrutiny by procedures determined by the Nomenclature Committee for Fungi(NCF).The previously invalidly published generic names Barriopsis,Collophora(as Collophorina),Cryomyces,Dematiopleospora,Heterospora(as Heterosporicola),lithophila,Palmomyces(as Palmaria)and Saxomyces are validated,as are two previously invalid family names,Bartaliniaceae and *** species of Lalaria,which were invalidly published are trans

关键词： Article 59 Classification One name Pleomorphic fungi Taxonomy