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Comparative Transcriptome Analysis of Shell-Matrix-Protein Genes and Observation of the Shell Microstructure in the Deep-Sea Clam Calyptogena marissinica

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Journal of Ocean University of China 2024年第3期23卷 797-810页

作者： SHI Yu LIU Dongting yao Gaoyou HE Maoxian CAS Key Laboratory of Tropical Marine Bio-Resources and Ecology Guangdong Provincial Key Laboratory of Applied Marine BiologySouth China Sea Institute of OceanologyChinese Academy of SciencesGuangzhou 510301China Southern Marine Science and Engineering Guangdong Laboratory(Guangzhou) Guangzhou 511458China University of Chinese Academy of Sciences Beijing 100049China

The deep-sea clam Calyptogena marissinica is widely distributed in the Haima cold seep ecosystem on the northwes-tern slope of the South China Sea with low pH values,low temperature and high *** information is available on the biomineralization of this *** this research,we generated a comprehensive transcript dataset of ***’s mantle tissue,and a total of 19821 unigenes were *** shell matrix proteins(SMP)-related genes were *** qPCR results showed that four out of six prismatic matrix genes(MSP2,MSP5,prisilkin-39,and shematrin),four out of the six nacreous matrix genes(perlucin,pif,pif97,and papilin),and two extrapallial fluid proteins(SPARC and calmodulin)were significantly expressed in the *** the nacreous and the prismatic layers are chrysanthemum-shaped,which are stacked on the top of each other to form a laminated nacreous *** alignment and phylogenetic analysis of MSP-5,Prisilkin-39,Perlucin,and Pif homologues showed that some amino acids of *** that differed from those detected in other molluscs may cause the different shape of the nacreous and prismatic layers,but do not lead to a change in the species’evolutionary *** results indicated the conservation of the functions of SMP-related genes in ***,and the specific shape of the prismatic and nacreous layers of this deep-sea mollusc,which will contribute to the research on the molecular regulation mechanisms of biomineralization in *** and provide a new perspective to investigate biomineralization in deep-sea clams in general.

关键词： transcriptome biomineralization mantle tissue shell Calyptogena marissinica

Cobalt-catalyzed reductive alkynylation to construct C(sp)-C(sp^(3))and C(sp)-C(sp^(2))bonds

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Chinese Chemical Letters 2024年第7期35卷 253-258页

作者： Lei Wan Yizhou Tong Xi Lu yao Fu Hefei National Research Center for Physical Sciences at the Microscale iChEMCAS Key Laboratory of Urban Pollutant ConversionAnhui Province Key Laboratory of Biomass Clean EnergyUniversity of Science and Technology of ChinaHefei 230026China Key Laboratory of Precision and Intelligent Chemistry School of Chemistry and Materials ScienceUniversity of Science and Technology of ChinaHefei 230026China

Transition-metal-catalyzed cross-electrophile coupling has emerged as a reliable method for constructing carbon–carbon ***,we report a general method,cobalt-catalyzed reductive alkynylation,to construct C(sp)-C(sp^(3))and C(sp)-C(sp^(2))*** presented reaction has a broad substrate scope,enabling the efficient cross-electrophile coupling between alkynyl bromides with alkyl halides and aryl or alkenyl(pseudo)*** presented reaction is conducted under mild conditions,tolerating many functional groups,thus suitable for the modification and synthesis of biologically active molecules.

关键词： Cobalt-catalysis Cross-electrophile coupling Carbon-carbon bond formation Reductive alkynylation Alkyne synthesis

Diagnosis of the Kinetic Energy of the“21·7”Extreme Torrential Rainfall Event in Henan Province,China

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Advances in Atmospheric Sciences 2024年第1期41卷 73-83页

作者： Xiuping yao Ruoying LI Xiaohong BAO Qiaohua LIU China Meteorological Administration Training Centre Beijing 100081China State Key Laboratory of Severe Weather Chinese Academy of Meteorological SciencesBeijing 100081China College of Atmospheric Sciences Nanjing University of Information Science and TechnologyNanjing 210044China

An extreme torrential rain(ETR)event occurred in Henan Province,China,during 18-21 July *** on hourly rain-gauge observations and ERA5 reanalysis data,the ETR was studied from the perspective of kinetic energy(K),which can be divided into rotational wind(V_(R))kinetic energy(K_(R)),divergent wind kinetic energy(K_(D)),and the kinetic energy of the interaction between the divergent and rotational winds(K_(RD)).According to the hourly precipitation intensity variability,the ETR process was divided into an initial stage,a rapid increase stage,and maintenance *** showed that the intensification and maintenance of ETR were closely related to the upper-level K,and most closely related to the upperlevel K_(R),with a correlation coefficient of up to *** particular,the peak value of hourly rainfall intensity lagged behind the K_(R) by 8 ***,diagnosis showed that K transformation from unresolvable to resolvable scales made the ETR increase *** meridional rotational wind(u_(R))and meridional gradient of the geopotential(φ)jointly determined the conversion of available potential energy(APE)to K_(R) through the barotropic process,which dominated the rapid enhancement of K_(R) and then caused the rapid increase in *** transportation of K by rotational wind consumed K_(R),and basically offset the K_(R) produced by the barotropic process,which basically kept K_(R) stable at a high value,thus maintaining the ETR.

关键词： extreme torrential rain rotational kinetic energy kinetic energy generation and transport barotropic process

Unified Classification and Rejection:A One-versus-all Framework

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Machine Intelligence Research 2024年第5期21卷 870-887页

作者： Zhen Cheng Xu-yao Zhang Cheng-Lin Liu State Key Laboratory of Multimodal Artificial Intelligence Systems Institute of AutomationChinese Academy of SciencesBeijing100190China School of Artificial Intelligence University of Chinese Academy of SciencesBeijing100049China

Classifying patterns of known classes and rejecting ambiguous and novel(also called as out-of-distribution(OOD))inputs are involved in open world pattern *** neural network models usually excel in closed-set classification while perform poorly in rejecting OOD *** tackle this problem,numerous methods have been designed to perform open set recognition(OSR)or OOD rejection/detection *** methods mostly take post-training score transformation or hybrid models to ensure low scores on OOD inputs while separating known *** this paper,we attempt to build a unified framework for building open set classifiers for both classification and OOD *** formulate the open set recognition of K-known-class as a(K+1)-class classification problem with model trained on known-class samples *** decomposing the K-class problem into K one-versus-all(OVA)binary classification tasks and binding some parameters,we show that combining the scores of OVA classifiers can give(K+1)-class posterior probabilities,which enables classification and OOD rejection in a unified *** maintain the closed-set classification accuracy of the OVA trained classifier,we propose a hybrid training strategy combining OVA loss and multi-class cross-entropy *** implement the OVA framework and hybrid training strategy on the recently proposed convolutional prototype network and prototype classifier on vision transformer(ViT)*** on popular OSR and OOD detection datasets demonstrate that the proposed framework,using a single multi-class classifier,yields competitive performance in closed-set classification,OOD detection,and misclassification *** code is available at https://***/zhen-cheng121/CPN_OVA_unified.

关键词： Open set recognition out-of-distribution detection misclassification detection convolutional prototype network oneversus-all Dempster-Shafer theory of evidence

Exoskeleton active assistance strategy for human muscle activation reduction during linear and circular walking

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Advances in Manufacturing 2024年第3期12卷 484-496页

作者： Wen-Tao Sheng Ke-yao Liang Hai-Bin Tang School of Intelligent Manufacturing Nanjing University of Science and TechnologyNanjing210094People’s Republic of China School of Mechatronics Engineering Harbin Institute of TechnologyHarbin150001People’s Republic of China

The exoskeleton is employed to assist humans in various domains including military missions,rehabilitation,industrial operation,and activities of daily living(ADLs).Walking is a fundamental ADL,and exoskeletons are capable of reducing the activation and metabolism of lower extremity muscles through active assistance during *** improve the performance of active assistance strategy,this article proposes a framework using an active hip ***,it correlates to an already established Bayesian-based human gait recognition algorithm,with a particular focus on linear and circular walking within industrial and ADL *** theorizing this strategy for exoskeletons,this study further reveals,in part,the activation characteristics of human hip muscles for the instruction and regulation of active assistance duration and onset *** proposed active assistance strategy provides new insights for enhancing the performance of assistive robots and facilitating human robot interaction within the context of ADLs.

关键词： Human-robot interaction Hip exoskeleton Muscle activation Walking assistance

Icariin attenuates vascular endothelial dysfunction by inhibiting inflammation through GPER/Sirt1/HMGB1 signaling pathway in type 1 diabetic rats

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Chinese Journal of Natural Medicines 2024年第4期22卷 293-306页

作者： yao Wenhui TAO Rongpin WAng Kai DIng Xuansheng School of Basic Medicine and Clinical Pharmacy China Pharmaceutical UniversityNanjing211198China

Icariin, a flavonoid glycoside, is extracted from Epimedium. This study aimed to investigate the vascular protective effects of icariin in type 1 diabetic rats by inhibiting high-mobility group box 1 (HMGB1)-related inflammation and exploring its potential mechanisms. The impact of icariin on vascular dysfunction was assessed in streptozotocin (STZ)-induced diabetic rats through vascular reactivity studies. Western blotting and immunofluorescence assays were performed to measure the expressions of target proteins. The release of HMGB1 and pro-inflammation cytokines were measured by enzyme-linked immunosorbent assay (ELISA). The results revealed that icariin administration enhanced acetylcholine-induced vasodilation in the aortas of diabetic rats. It also notably reduced the release of pro-inflammatory cytokines, including interleukin-8 (IL-8), IL-6, IL-1β, and tumor necrosis factor-alpha (TNF-α) in diabetic rats and high glucose (HG)-induced human umbilical vein endothelial cells (HUVECs). The results also unveiled that the pro-inflammatory cytokines in the culture medium of HUVECs could be increased by rHMGB1. The increased release of HMGB1 and upregulated expressions of HMGB1-related inflammatory factors, including advanced glycation end products (RAGE), Toll-like receptor 4 (TLR4), and phosphorylated p65 (p-p65) in diabetic rats and HG-induced HUVECs, were remarkably suppressed by icariin. Notably, HMGB1 translocation from the nucleus to the cytoplasm in HUVECs under HG was inhibited by icariin. Meanwhile, icariin could activate G protein-coupled estrogen receptor (GPER) and sirt1. To explore the role of GPER and Sirt1 in the inhibitory effect of icariin on HMGB1 release and HMGB-induced inflammation, GPER inhibitor and Sirt1 inhibitor were used in this study. These inhibitors diminished the effects of icariin on HMGB1 release and HMGB1-induced inflammation. Specifically, the GPER inhibitor also negated the activation of Sirt1 by icariin. These findings suggest t

关键词： Icariin Diabetes Inflammation Vascular endothelial dysfunction GPER HMGB1

An application of small-world network on predicting the behavior of infectious disease on campus

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Infectious Disease Modelling 2024年第1期9卷 177-184页

作者： Guojin Wang Wei yao School of Management Fudan University220 Handan RoadShanghai200433China Shanghai Key Laboratory of Acupuncture Mechanism and Acupoint Function Fudan University220 Handan RoadShanghai200433China

Networks haven been widely used to understand the spread of infectious *** study examines the properties of small-world networks in modeling infectious disease on *** different small-world models are developed and the behaviors of infectious disease in the models are observed through numerical *** results show that the behavior pattern of infectious disease in a small-world network is different from those in a regular network or a random *** spread of the infectious disease increases as the proportion of long-distance connections p increasing,which indicates that reducing the contact among people is an effective measure to control the spread of infectious *** probability of node position exchange in a network(p2)had no significant effect on the spreading speed,which suggests that reducing human mobility in closed environments does not help control infectious ***,the spreading speed is proportional to the number of shared nodes(s),which means reducing connections between different groups and dividing students into separate sections will help to control infectious *** the end,the simulating speed of the small-world network is tested and the quadratic relationship between simulation time and the number of nodes may limit the application of the SW network in areas with large populations.

关键词： Small-world network Complex networks Infectious disease on campus Susceptible-infected model Numerical simulation Shared nodes between networks

Dynamic Couplingand Cooperative Control for Multi-paralleled Doubly Fed Induction Generator Wind Farms during Symmetrical Low Voltage Ride-through in a Weak Grid

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Protection and Control of Modern Power Systems 2024年第3期9卷 112-125页

作者： Lei Guan Jun yao the College of Electrical Engineering at Chongqing University ChongqingChina the State Key Laboratory of Power Transmission Equipment Technology School of Electrical EngineeringChongqing UniversityChongqing 400044China

In multi-fed grid-connected systems,there are complex dynamic interactions between different pieces of *** in situations of weak-grid faults,the dynamic coupling between equipment becomes more *** may cause the system to experience small-signal instability during the fault *** this paper,multi-paralleled doubly fed induction generator(DFIG)-based wind farms(WFs)are taken as an example to study the dynamic coupling within a multi-fed system during fault steady-state of symmetrical low voltage ride-through(LVRT)in a weak *** analysis reveals that the dynamic coupling between WFs will introduce a damping shift to each *** inevitably affects the system’s dynamic stability and brings the risk of small-signal instability during fault steady-state in LVRT *** the distance to fault location and fault severity will exacerbate the dynamic coupling between *** of the dynamic coupling,adjusting the control state of one WF will affect the stability of the remaining WFs in the ***,a cooperative control strategy for multi-paralleled DFIG WFs is proposed to improve dynamic stability during *** analysis and the effectiveness of the proposed control strategy are verified by modal analysis and simu-lation.

关键词： Doubly fed induction generator(DFIG) wind farms(WFs) dynamic stability low voltage ride through(LVRT) weak grid dynamic coupling

Ambient particle composition and toxicity in 31 major cities in China

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Fundamental Research 2024年第3期4卷 505-515页

作者： Lu Zhang Maosheng yao State Key Joint Laboratory of Environmental Simulation and Pollution Control College of Environmental Sciences and EngineeringPeking UniversityBeijing 100871China

Current assessment of air quality or control effectiveness is solely based on particulate matter(PM)mass levels,without considering their toxicity differences in terms of health ***,we collected a total of 465 automo-bile air conditioning filters from 31 major Chinese cities to study the composition and toxicity of PM at a national *** assay showed that normalized PM toxicity(NIOG)in different Chinese cities varied greatly from the highest 4.99×10^(-3)for Changsha to the lowest 7.72×10^(-4)for ***0G values were observed to have significant correlations with annual PM_(10) concentration(r=-0.416,p=0.020)and some PM components(total fungi,so.2-and calcium element).The concentrations of different elements and water-soluble ions in PM also varied by several orders of magnitude for 31 cities in *** concentrations in PM analyzed using limulus amebocyte lysate assay ranged from 2.88 EU/mg PM(Hangzhou)to 62.82 EU/mg PM(Shijiazhuang)among 31 Chinese ***,real-time qPCR revealed 10~100-fold differences in total bacterial and fungal levels among 31 Chinese *** concentrations of chemical(water soluble ions and trace elements)and bi-ological(fungi,bacteria and endotoxin)components in PM were found to be significantly correlated with some meteorological factors and gaseous pollutants such as SO_(2).Our results have demonstrated that PM toxicity from 31 major cities varied greatly up to 6.5 times difference;and components such as fungi and SO_(4)^(2-)in PM could play important roles in the observed PM *** city-specific air pollution control strategy that integrates toxicity factors should be enacted in order to maximize health and economic *** work also provides a comprehensive view on the overall PM pollution situation in China.

关键词： PM toxicity Oxidative potential Biologicals Chemical components Endotoxin