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Simultaneous multiplex genome loci editing of Halomonas bluephagenesis using an engineered CRISPR-guided base editor

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Synthetic and Systems Biotechnology 2024年第3期9卷 586-593页

作者： Yulin Zhang yang Zheng Qiwen Hu Zhen Hu Jiyuan sun Ping Cheng Xiancai Rao xiao-Ran Jiang Medical Research Institute Southwest UniversityChongqing400716China Department of Microbiology College of Basic Medical SciencesArmy Medical University(Third Military Medical University)Chongqing400038China

Halomonas bluephagenesis TD serves as an exceptional chassis for next generation industrial biotechnology to produce various ***,the simultaneous editing of multiple loci in *** TD remains a significant ***,we report the development of a multiple loci genome editing system,named CRISPR-deaminase-assisted base editor(CRISPR-BE)in *** *** system comprises two components:a cytidine(CRISPR-cBE)and an adenosine(CRISPR-aBE)deaminase-based base ***-cBE can introduce a cytidine to thymidine mutation with an efficiency of up to 100%within a 7-nt editing window in *** ***,CRISPR-aBE demonstrates an efficiency of up to 100%in converting adenosine to guanosine mutation within a 7-nt editing ***-cBE has been further validated and successfully employed for simultaneous multiplexed editing in *** *** findings reveal that CRISPR-cBE efficiently inactivated all six copies of the IS1086 gene simultaneously by introducing stop *** system achieved an editing efficiency of 100%and 41.67%in inactivating two genes and three genes,*** substituting the Pcas promoter with the inducible promoter PMmp1,we optimized CRISPR-cBE system and ultimately achieved 100%editing efficiency in inactivating three *** conclusion,our research offers a robust and efficient method for concurrently modifying multiple loci in *** TD,opening up vast possibilities for industrial applications in the future.

关键词： Base editor Gene editing Multiplex Halomonas bluephagenesis

Reply to Comment on“Chemical vapor deposition synthesis and Raman scattering investigation of quasi-one-dimensional ZrS_(3) nanoflakes”

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Nano Research 2024年第9期17卷 8649-8650页

作者： yang Chen Yuanyuan Jin Junqiang yang Yizhang Ren Zhuojun Duan xiao Liu Jian sun Song Liu Xukun Zhu Xidong Duan Institute of Chemical Biology and Nanomedicine(ICBN) College of Chemistry and Chemical EngineeringHunan UniversityChangsha 410082China Hunan Key Laboratory of Two-Dimensional Materials and State Key Laboratory for Chemo/Biosensing and Chemometrics College of Chemistry and Chemical EngineeringHunan UniversityChangsha 410082China Department of Chemistry Southern University of Science and TechnologyShenzhen 518055China School of Physics and Electronics Central South UniversityChangsha 410083China

1 Introduction Thanks very much for *** taking time to comment on our recent paper regarding“Chemical vapor deposition synthesis and Raman scattering investigation of quasi-one-dimensional ZrS_(3) nanoflakes”.We summarize the suggestions of *** as made in the comment[1].First,*** suggested that there are just three peaks of two S 2p doublets in Fig.2(b)in the original paper[1],which is inconsistent to the four peaks of previous reports[2-4].Second,*** mentioned that the ratio of two S 2p doublets is helpful to identify the sulfur vacancies,which have a great impact on the n-type semiconducting nature of ZrS_(3).Third,*** mentioned that Zr 3d peak appearing at 184.7 eV is wider than previous reports[2,4],which may be accounted by the appearance of ZrS_(2)O,and Zr remains in the tetravalent state.

关键词： state. synthesis quasi

Publication trends of Leber congenital amaurosis researches:a bibliometric study during 2002-2022

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International Journal of Ophthalmology(English edition) 2024年第8期17卷 1501-1509页

作者： xiao-Xu Huang Yi-Min Wang Min-Yue Xie Yi-Qing sun xiao-Huan Zhao Yu-Hong Chen Jie-Qiong Chen Si-yang Han Min-Wen Zhou xiao-Dong sun Department of Ophthalmology Shanghai General HospitalShanghai Jiao Tong University School of MedicineShanghai 200080China National Clinical Research Center for Eye Disease Shanghai 200080China Shanghai Key Laboratory of Ocular Fundus Diseases Shanghai 200080China Shanghai Engineering Center for Visual Science and Photomedicine Shanghai 200080China Department of Ophthalmology Zhongshan HospitalFudan UniversityShanghai 200030China Beijing Tongren Hospital Capital Medical UniversityBeijing 100054China Eberly College of Science Penn State UniversityUniversity Park 16802-1503United States

AIM:To analyze the changes in scientific output relating to Leber congenital amaurosis(LCA)and forecast the study trends in this ***:All of the publications in the field of LCA from 2002 to 2022 were collected from Web of Science(WOS)*** analyzed the quantity(number of publications),quality(citation and H-index)and development trends(relative research interest,RRI)of published LCA research over the last two ***,VOSviewer software was applied to define the co-occurrence network of keywords in this ***:A total of 2158 publications were ultimately *** found that the focus on LCA kept rising and peaked in 2015 and 2018,which is consistent with the development trend of gene *** USA has contributed most to this field with 1162 publications,56674 citations and the highest H-index value(116).The keywords analysis was divided into five clusters to show the hotspots in the field of LCA,namely mechanism-related,genotype-related,local phenotype-related,system phenotype-related,and *** also identified gene therapy and antiretinal degeneration therapy as a major focus in recent ***:Our study illustrates historical research process and future development trends in LCA *** may help to guide the orientation for further clinical diagnosis,treatment and scientific research.

关键词： VOSviewer bibliometrics Leber congenital amaurosis gene therapy hotpots

Pancreatic cancer with gastrointestinal obstruction as an initial symptom

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Hepatobiliary & Pancreatic Diseases International 2024年第5期23卷 545-547页

作者： Jia-Ren Xu Xing-Nan Wu Yong-Qiang Si Jin-Pu yang xiao-sun Liu Department of Gastrointestinal Surgery the First Affiliated HospitalZhejiang University School of MedicineHangzhou 310003China Department of Gastroenterology the First Affiliated HospitalZhejiang University School of MedicineHangzhou 310003China

To the Editor: Pancreatic cancer is the fourth leading cause of cancer mortality in the United States [ 1, 2 ]. Risk factors of pancreatic cancer include smoking, family history of chronic pancreatitis, advanced age, male, diabetes mellitus, and obesity [1]. Most of patients have no obvious symptoms in the early stage, and are often diagnosed in the late stage and accompanied by invasion of surrounding tissues and distant metastasis, such as local lymph nodes, liver, lung and peritoneum [ 1, 3 ]. Therefore, the prognosis is poor.

关键词： cancer Pancreatic invasion

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A novel predictive braking energy recovery strategy for electric vehicles considering motor thermal protection

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Science China(Technological Sciences) 2024年第4期67卷 1253-1269页

作者： yang Chao sun TongLin yang LiuQuan ZHANG YuHang WANG WeiDa School of Mechanical Engineering Beijing Institute of TechnologyBeijing 100084China

Braking energy recovery(BER)aims to recover the vehicle's kinetic energy by coordinating the motor and mechanical braking torque to extend the driving range of the electric vehicle(EV).To achieve this goal,the motor/generator mode requires frequent switching and prolonged operation during *** this case,the motor temperature will unavoidably rise,potentially triggering motor thermal protection(MTP).Activating MTP increases the risk of motor component failure,and the EV typically disables the BER ***,maximizing BER while reducing the risk of motor overheating is a challenging *** address this issue,this article proposes a predictive BER strategy with MTP using the non-smooth Pontryagin Minimum Principle(NSPMP)for ***,a Markov long short-term memory(MLSTM)model is designed to obtain future velocity ***,the BER problem with MTP in the studied EV is embedded in a model predictive control(MPC)***,under the MPC framework,the NSPMP strategy is proposed to resolve the problem of ***,the performance of the proposed strategy is verified through simulation and a hardware-in-loop *** results show that in two real-world driving cycles,compared to the rule-based strategy,the proposed strategy reduced power consumption by 1.24%and0.96%,respectively,and effectively limited motor ***,under global cycle conditions,this strategy demonstrated better MTP control performance compared to other benchmark strategies.

关键词： electric vehicle braking energy recovery strategy motor thermal protection non-smooth PMP

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Oxidation behavior of Ni-based superalloy GH4738 under tensile stress

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Rare Metals 2024年第8期43卷 3913-3920页

作者： Ji-Chong Hu Hai-Liang Huang Chong-Chong Wu xiao-Yu sun Jie Wang Yan-Hong yang Jing-Long Qu Liang Jiang Jin-He Dou yang Chen Institute for Advanced Studies in Precision Materials Yantai UniversityYantai 264005China Department of Management and Engineering Linkoping University58183LinkopingSweden Shi-Changxu Innovation Center for Advanced Materials Institute of Metal ResearchChinese Academy of SciencesShenyang110016China Gaona Aero Material Co. LtdBeijing 100081China College of Artificial Intelligence and Big Data Shandong First Medical University and Shandong Academy of Medical SciencesJinan250117China

Revealing the oxidation behavior of superalloys is crucial for optimizing material properties and extending service *** study investigated the oxidation behavior of superalloy GH4738 under stress states at 850℃.High-throughput specimens were fabricated to withstand different stresses at the same *** oxidation s amples were analyzed using the mass gain method to obtain oxidation kinetic *** results show that the external stress below 200 MPa could improve the oxidation resistance of the *** tensile stress increasing,the oxide layer becomes thinner,denser and more complete,while internal oxidation *** tensile stress alters the structure of the external oxide layer from a two-layer to a threelayer *** Cr_(2)O_(3) oxide layer inhibits the outward diffusion of Ti,leading to Ti enrichment at the oxide-matrix interface and altering the oxidation mechanism of GH4738.

关键词： Ni-based Superalloy Oxidation behavior Tensile stress Oxide layer

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Strengthening and control of second-phase particle precipitation in ferritic/austenitic/martensitic heat-resistant alloys:a review

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Journal of Iron and Steel Research International 2024年第1期31卷 3-23页

作者： Xue-cheng Peng Han-jie Guo Xin-fang Zhang Yi-wa Luo Ye sun Jing Guo Rong-guang yang xiao-dan Zheng School of Metallurgical and Ecological Engineering University of Science and Technology Beijing(USTB)Beijing100083China Beijing Key Laboratory of Special Melting and Preparation of High-End Metal Materials University of Science and Technology Beijing(USTB)Beijing100083China Beijing Shougang Gitane New MATERIALS Co. Ltd.Beijing102206China

Heat-resistant alloys with excellent mechanical properties are widely used in various fields,and further improvement in their properties is essential to meet the requirements in new-generation advanced supercritical boilers,nuclear reactors,superheaters,and other new materials *** effectively enhance the comprehensive performance of heat-resistant alloys,second-phase particle strengthening has been widely studied,and in the face of different service envi-ronments of advanced heat-resistant steels,the selection of suitable second-phase particles is essential to maximize the performance of these *** this end,three major types of reinforcing phases in heat-resistant alloys such as carbides,rare earth oxides,and intermetallic compounds are summarized.A comparative analysis of the precipitation behavior of the reinforcing phases with different types as well as the risks and means of controlling their use in service,is *** parameters for the application of various types of second-phase particles in heat-resistant alloys are provided to support the design and preparation of new ultrahigh-performance heat-resistant alloys.

关键词： Heat-resistant alloy Second-phase particle Carbide Rare earth oxide Intermetallic compound Strengthening

Sm^(2+)ions boost ammonia electrooxidation reaction on samarium oxide anode for hydrogen generation in non-aqueous electrolyte

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Nano Research 2024年第7期17卷 5856-5862页

作者： Xingyu Liu Xue yang Han sun Zekai yang Haijun Chen Tianjin Key Laboratory of Optoelectronic Thin Film Devices and Technology College of Electronic Information and Optical EngineeringNankai UniversityTianjin 300350China

Ammonia has garnered recognition as a zero-carbon fuel due to its high-density hydrogen storage capacity and its convenience for storage and *** address the challenges associated with the direct usage of ammonia,the development of NH_(3)-to-H_(2)conversion technologies has emerged as a promising and effective ***,we present for the first time that crystallized Sm_(2)O_(3−x)electrodes demonstrate high and stable electrocatalytic activities,including N_(2)evolution rate and Faradaic efficiency,for ammonia electrolysis in a non-aqueous *** was observed that Sm^(2+)ions in samarium oxide play an indispensable role in the ammonia electrooxidation reaction on the ***,the mechanism of ammonia electrooxidation has also been elucidated,laying the foundation for a better understanding of the relationship between local structure and electrochemical properties in order to facilitate research on Pt-free electrocatalysts for the electrolysis of ammonia into H_(2).

关键词： NH_(3)-to-N_(2)conversion ammonia electrooxidation reaction ammonia electrolysis non-aqueous electrolyte samarium oxide

Risk-Averse Two-Stage Distributionally Robust Economic Dispatch Model Under Uncertain Renewable Energy

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CSEE Journal of Power and Energy Systems 2024年第4期10卷 1514-1524页

作者： Ce yang Weiqing sun Jiannan yang Dong Han Department of Control Science and Engineering University of Shanghai for Science and TechnologyShanghai 200093China Department of Electrical Engineering University of Shanghai for Science and TechnologyShanghai 200093China School of Economics and Business Administration Chongqing UniversityChongqing 400044China

With the participation of large quantities of renewable energy in power system operations,their volatility and intermittence increases the difficulties and challenges of power system economic *** the uncertainty of renewable energy generation,based on the distributionally robust optimization method,a two-stage economic dispatch model is proposed to minimize the total operation *** this paper,it is assumed that the fluctuating of renewable power generation follows the unknown probability distribution that is restricted in an ambiguity set,which is established by utilizing the first-order moment information of available historical ***,the theory of conditional value-at-risk is introduced to transform the model into a tractable model,which we call robust counterpart *** on the stochastic dual dynamic programming method,an improved iterative algorithm is proposed to solve the robust counterpart ***,the convergence optimum can be obtained by the improved iterative algorithm,which performs a forward pass and backward pass repeatedly in each iterative ***,by comparing with other methods,the results on the modified IEEE 6-bus,118-bus,and 300-bus system show the effectiveness and advantages of the proposed model and method.

关键词： Energy and reserve co-dispatch distributionally robust conditional value-at-risk stochastic dual dynamic programming