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药物小分子穿越磷脂双层膜输运过程中的时滞效应

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原子与分子物理学报 2024年第1期41卷 1-8页

作者：王凡张菁菁蒋中英赵新军伊犁师范大学微纳电传感器技术与仿生器械实验室伊宁835000 伊犁师范大学物理科学与技术学院新疆凝聚态相变与微结构实验室伊宁835000

本文基于扩散动力学,建立了一种新的药物小分子穿越磷脂双层膜输运的理论模型,研究药物小分子穿越磷脂双层膜输运的动态过程,考察药物小分子跨膜输运过程中的时间延迟(时滞)效应.研究发现,药物小分子在数分钟内穿越磷脂双层膜各区域进... 详细信息

本文基于扩散动力学,建立了一种新的药物小分子穿越磷脂双层膜输运的理论模型,研究药物小分子穿越磷脂双层膜输运的动态过程,考察药物小分子跨膜输运过程中的时间延迟(时滞)效应.研究发现,药物小分子在数分钟内穿越磷脂双层膜各区域进入细胞,由于时滞效应,穿膜过程呈现了周期性演化特性.当药物小分子数量增加到一定程度,磷脂分子层会出现微小孔,让积累的药物小分子快速通过.通过分析模型中各参数的敏感性,我们还发现,药物小分子在磷脂双层膜内不同区域的扩散特性,以及输运过程的时滞性,都会对药物小分子穿越磷脂双层膜的动力学有较大程度的影响.理论结果符合模拟、实验观测,进一步深刻揭示了药物小分子穿越磷脂双层膜的穿膜特性,可为设计确切的疗法药物提供必要的参考和新方案.

关键词：药物小分子磷脂双层膜时滞效应

Effects of thiocyanate anions on switching and structure of poly(N-isopropylacrylamide) brushes

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Chinese Physics B 2019年第6期28卷 262-269页

作者： xin-jun zhao Zhi-Fu Gao xinjiang Laboratory of Phase Transitions and Microstructures of Condensed Matter Physics Yili Normal UniversityYining 835000China Laboratory of Micro-Nano Electro Biosensors and Bionic Devices Yili Normal UniversityYining 835000China xinjiang Astronomical Observatory Chinese Academy of Sciences150Science 1-StreetUrumqi 830011China

In this work, we investigate the effects of thiocyanate anions on the switching and the structure of poly(Nisopropylacrylamide)(PNIPAM) brushes using a molecular theory. Our model takes into consideration the PNIPAM–anion bonds, the electrostatic effects and their explicit coupling to the PNIPAM conformations. It is found that at low thiocyanate anion concentration, as the anion concentration of thiocyanate increases, thiocyanate anions are more associated with PNIPAM chains through the PNIPAM–anion bonds, which contributes to stronger electrostatic repulsion and leads to an increase of lower critical solution temperature(LCST). By analyzing the average volume fractions of PNIPAM brushes,it is found that the PNIPAM brush presents a plateau structure. Our results show that the thiocyanate anions promote phase segregation due to the PNIPAM–anion bonds and the electrostatic effect. According to our model, the reduction of LCST can be explained as follows: at high thiocyanate anion concentration, with the increase of thiocyanate concentration, more ion bindings occurring between thiocyanate anions and PNIPAM chains will result in the increase of the hydrophobicity of PNIPAM chains;when the increase of electrostatic repulsion is insufficient to overcome the hydrophobic interaction of PNIPAM chains, it will lead to the reduction of brush height and LCST at high thiocyanate anion concentration. Our theoretical results are consistent with the experimental observations, and provide a fundamental understanding of the effects of thiocyanate on the LCST of PNIPAM brushes.

关键词： molecular theory PNIPAM brushes effect of thiocyanate anions

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水合作用与pH调控聚电解质刷的构象转变

原子与分子物理学报 2024年第3期41卷 33-40页

作者：李康睿马奭文王利云赵新军伊犁师范大学物理科学与技术学院新疆凝聚态相变与微结构实验室伊宁835000 伊犁师范大学微纳电传感器技术与仿生器械实验室伊宁835000

我们基于Flory-Huggins理论,建立理论模型研究水合作用与pH调控聚电解质刷的构象转变.理论模型考虑聚电解质链与水分子间的作用(聚电解质链的水合作用)、体系中的静电作用.研究发现,随着水合作用的改变,聚电解质刷出现由溶胀到塌缩的构... 详细信息

我们基于Flory-Huggins理论,建立理论模型研究水合作用与pH调控聚电解质刷的构象转变.理论模型考虑聚电解质链与水分子间的作用(聚电解质链的水合作用)、体系中的静电作用.研究发现,随着水合作用的改变,聚电解质刷出现由溶胀到塌缩的构象转变.由此表明了水合作用可在很大程度调节聚电解质刷的相变.通过分析pH的调控效应我们还发现,在碱性环境中(pH=8),聚电解质链单体的解离度增大,静电排斥会使得聚电解质刷溶胀.由此表明,聚电解质刷内水合作用与静电效应的耦合,将会共同决定聚电解质刷的构象转变特性.理论结果深刻揭示了水合作用的改变,会使得聚电解质刷体系发生相变,pH可在很大程度上改变其相变特性.

关键词：水合作用 pH 聚电解质刷构象转变

Hes1调控AKT-MDM2-p53-PTEN通路的一种物理机制

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原子与分子物理学报 2024年第5期41卷 125-134页

作者：苏瑞李循王书恒刘彼得赵新军李九智伊犁师范大学物理科学与技术学院新疆凝聚态相变与微结构实验室伊宁835000 伊犁师范大学微纳电传感器技术与仿生器械实验室伊宁835000 新疆维吾尔自治区人民医院泌尿外科乌鲁木齐830000

基于Hill动力学与Michaelis-Menten方程,建立理论模型研究发状分裂相关增强子1(Hairy and enhancer of split 1,Hes1)调控蛋白激酶B(Protein Kinase B,AKT)-鼠双微体2(Murine Double Minute2,MDM2)-抗癌基因p53(p53)-第10号染色体缺失的磷酸酶及张力蛋白同源的基因(Phosphatase and tensin homolog deleted on chromosome ten,PTEN)通路的一种物理机制.研究发现,Hes1通过与PTEN结合抑制PTEN表达,并调控AKT信号.表明了Hes1蛋白的合成,以及Hes1与PTEN相互作用调控AKT-MDM2-p53-PTEN通路信号,将会有效地控制细胞结果.Hes1作为AKT-MDM2-p53-PTEN信号通路中上游调节的重要因素,还可以在一定程度上通过影响p53蛋白功能,改变p53对肿瘤的抑制性.理论结果可用于预测Notch通路信号异常诱导的致癌性,并进一步揭示了Notch信号通路影响细胞AKT-MDM2-p53-PTEN通路的激活机制.

关键词： Hes1蛋白调控 AKT-MDM2-p53-PTEN通路

模型化研究两细胞间基因、蛋白耦合振荡中的噪声效应

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原子与分子物理学报 2024年第4期41卷 149-158页

作者：苏瑞李九智李循王书恒刘彼得赵新军伊犁师范大学物理科学与技术学院新疆凝聚态相变与微结构实验室伊宁835000 伊犁师范大学微纳电传感器技术与仿生器械实验室伊宁835000 新疆维吾尔自治区人民医院泌尿外科乌鲁木齐830000

本文基于Hill动力学与Michaelis-Menten方程,建立理论模型研究两细胞间基因、蛋白耦合振荡中的噪声效应.研究发现,在Notch信号通路中,两细胞间基因、蛋白耦合振荡呈现了周期振荡特性,表明了细胞间信号传导的同步振荡特性.“内在”噪声... 详细信息

本文基于Hill动力学与Michaelis-Menten方程,建立理论模型研究两细胞间基因、蛋白耦合振荡中的噪声效应.研究发现,在Notch信号通路中,两细胞间基因、蛋白耦合振荡呈现了周期振荡特性,表明了细胞间信号传导的同步振荡特性.“内在”噪声和“外在”噪声对两细胞间基因、蛋白耦合振荡有着不同的作用.内噪声有利于细胞间Notch信号通路中各基因、蛋白表达再次提升.外噪声诱导通路中基因、蛋白的表达水平降低,周期振荡变得阻尼.内、外噪声共同作用不仅可使得基因表达适当并呈现出持续振荡模式,而且还可使得细胞间基因转录合成相应的蛋白过程呈现出持续振荡模式.从而表明了基因表达的内、外噪声共同作用有利于控制细胞间基因激活、蛋白合成保持周期节律性.本文理论结果揭示了内外噪声对细胞间Notch信号通路动力学的一种调控机制,确定了内外噪声各自的调控效应,澄清了内外噪声共同作用调控体系持续周期振荡的物理机制,理论结果符合实验,可为设计阻止Notch体系基因、蛋白变异导致的多种疾病和癌症的通路治疗方案提供理论依据.

关键词：细胞间基因、蛋白耦合振荡噪声

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水合作用与 pH 调控两性离子聚合物刷的相变行为

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原子与分子物理学报 2024年第4期41卷 11-18页

作者：李康睿李循王书恒刘彼得赵新军李九智伊犁师范大学物理科学与技术学院新疆凝聚态相变与微结构实验室伊宁835000 伊犁师范大学微纳电传感器技术与仿生器械实验室伊宁835000 新疆维吾尔自治区人民医院泌尿外科乌鲁木齐830000

本文基于Flory-Huggins理论,建立理论模型研究水合作用与pH调控两性离子聚合物(ZP)刷的相变行为.理论模型考虑ZP的水合作用,以及ZP刷体系中的静电作用.研究发现,在不同pH条件下,ZP刷的体积分数随着水合作的减弱而的增加.随着pH的变化,Z... 详细信息

本文基于Flory-Huggins理论,建立理论模型研究水合作用与pH调控两性离子聚合物(ZP)刷的相变行为.理论模型考虑ZP的水合作用,以及ZP刷体系中的静电作用.研究发现,在不同pH条件下,ZP刷的体积分数随着水合作的减弱而的增加.随着pH的变化,ZP刷构象随着水合性转变行为明显改变,这是由于pH调控ZP链单体带有过多的净电荷(正电荷或负电荷),致使ZP链内出现静电排斥导致ZP刷溶胀.另外,当ZP链单体呈现过多的净电荷,会在很大程度上决定ZP刷体系静电势,影响ZP刷的相变行为.通过考察体系自由能,我们还发现,ZP刷体系自由能呈现了极大值,随着pH值的变化,自由能呈现的极大值随之改变,由此表明了体系的不稳定性,进而导致ZP刷体系发生相变.

关键词：水合作用与pH 两性离子聚合物(ZP)刷构象转变

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Development of synthetic volatile attractant for male Ectropis obliqua moths

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Journal of Integrative Agriculture 2016年第7期15卷 1532-1539页

作者： SUN Xiao-ling LI Xi-wang xin zhao-jun HAN Juan-juan RAN Wei LEI Shu Tea Research Institute Chinese Academy of Agricultural Sciences Key Laboratory of Tea Biology and Resources Utilization Ministry of Agriculture

The tea geometridEctropis obliquais one of the most serious leaf-feeding insect pests in tea （Camelia sinensis） in East Asia. Although several volatile chemicals emitted from tea plants have been reported to be attractive toE. obliqua moths, no synthetic attractants for E. obliqua moths have been developed. By measuring the behavioral responses of the moth to a series of chemicals in the lab, we found that a blend containing a ternary mixture containing （Z）-3-hexenal, （Z）-3-hexenyl hexanoate and benzyl alcohol clearly attracted toE. obliqua moths of both sex and that （Z）-3-hexenyl acetate could enhance the attractiveness of the ternary blend. Moreover, we found that the volatiles emitted from the plant-E. obliqua larva com-plex have the same attractiveness as： 1） the blend of volatiles containing the ternary mixture and 2） the blend containing （Z）-3-hexenyl acetate plus the ternary mixture to both male and female moths. In a ifeld bioassay, more male moths were observed on traps that were baited with the blend containing （Z）-3-hexenyl acetate plus the ternary mixture than on control traps. Our study raises the tantalizing possibility that synthetic blends could be deployed as attractants for pests in the ifeld.

关键词： attractant synthetic volatile blends Ectropis obliqua moth tea plantation

Structure and switching of single-stranded DNA tethered to a charged nanoparticle surface

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Chinese Physics B 2016年第7期25卷 269-276页

作者：赵新军高志福 xinjiang Laboratory of Phase Transitions and Microstructures of Condensed Matter Physics Yi Li Normal University Yining 835000 China National Laboratory of Solid State Microstructures and Department of Physics Nanjing University Nanjing 210093 China xinjiang Astronomical Observatory Chinese Academy of Sciences Urumqi 830011 China

Using a molecular theory, we investigate the temperature-dependent self-assembly of single-stranded DNA（ss DNA）tethered to a charged nanoparticle surface. Here the size, conformations, and charge properties of ss DNA are taken into account. The main results are as follows： i） when the temperature is lower than the critical switching temperature, the ss DNA will collapse due to the existence of electrostatic interaction between ss DNA and charged nanoparticle surface; ii）for the short ss DNA chains with the number of bases less than 10, the switching of ss DNA cannot happen, and the critical temperature does not exist; iii） when the temperature increases, the electrostatic attractive interaction between ss DNA and charged nanoparticle surface becomes weak dramatically, and ss DNA chains will stretch if the electrostatic attractive interaction is insufficient to overcome the elastic energy of ss DNA and the electrostatic repulsion energy. These findings accord well with the experimental observations. It is predicted that the switching of ss DNA will not happen if the grafting densities are too high.

关键词： molecular theory ss DNA tethered to charged nanoparticle surface temperature-dependent switching

Role of hydrogen bonding in solubility of poly(N-isopropylacrylamide) brushes in sodium halide solutions

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Chinese Physics B 2016年第7期25卷 277-285页

作者：赵新军高志福 xinjiang Laboratory of Phase Transitions and Microstructures of Condensed Matter Physics Yi Li Normal University National Laboratory of Solid State Microstructures and Department of Physics Nanjing University xinjiang Astronomical Observatory Chinese Academy of Sciences

By employing molecular theory, we systematically investigate the shift of solubility of poly（N-isopropylacrylamide）（PNIPAM） brushes in sodium halide solutions. After considering PNIPAM–water hydrogen bonds, water–anion hydrogen bonds, and PNIPAM–anion bonds and their explicit coupling to the PNIPAM conformations, we find that increasing temperature lowers the solubility of PNIPAM, and results in a collapse of the layer at high enough temperatures. The combination of the three types of bonds would yield a decrease in the solubility of PNIPAM following the Hofmeister series： Na Cl＆gt;Na Br＆gt;Na I. PNIPAM–water hydrogen bonds are affected by water–anion hydrogen bonds and PNIPAM–anion bonds. The coupling of polymer conformations and the competition among the three types of bonds are essential for describing correctly a decrease in the solubility of PNIPAM brushes, which is determined by the free energy associated with the formation of the three types of bonds. Our results agree well with the experimental observations, and would be very important for understanding the shift of the lower critical solution temperature of PNIPAM brushes following the Hofmeister series.

关键词： molecular theory PNIPAM brushes anion effect hydrogen bonds