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Frontiers of Optoelectronics 2020年第4期13卷 360-370页

作者： Tatiana A.SAVELIEVA Marina N.KURYANOVA Ekaterina V.AKHLYUSTINA Kirill G.LINKOV Gennady A.MEEROVICH victor b.loschenov Prokhorov General Physics Institute of the Russian Academy of Sciences Moscow 119991Russia National Research Nuclear University MEPhl Moscow 115409Russia

During intraoperative fluorescence navigation to remove various neoplasms and during pharmacokinetic studies of photosensitizers in laboratory animals,in many cases,the ratio of photosensitizer accumulation in the tumor and normal tissue can reach>10-fold,which inevitably changes their optical *** the same time,the tumor formation process causes various metabolic and structural changes at cellular and tissue levels,which lead to changes in optical properties.A hardwaresoftware complex for the spectral-fluorescence studies of the content of fluorochromes in biological tissues with significantly different optical properties was developed,and it was tested on optical phantoms with various concentrations of photosensitizers,absorbers,and *** correct the influence of optical properties on the photosensitizer concentration analysis by fluorescence spectroscopy,we propose the spectrum-processing algorithm,which combines empirical and theory-based approaches.

关键词： fluorescence spectroscopy scattering absorption attenuation correction optical phantoms

New approaches to diagnostics and treatment of cholangiocellular cancer based on photonics methods

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Frontiers of Optoelectronics 2020年第4期13卷 352-359页

作者： Dmitry V.YAKOVLEV Dina S.FARRAKHOVA Artem A.SHIRYAEV Kanamat T.EFENDIEV Maxim V.loschenov Liana M.AMIRKHANOVA Dmitry O.KORNEV Vladimir V.LEVKIN Igor V.RESHETOV victor b.loschenov Shemyakin-Ovchinnikov Institute of bioorganic Chemistry Russian Academy of SciencesMoscow 117997Russia Prokhorov General Physics Institute of Russian Academy of Sciences Moscow 119991Russia University Clinical Hospital No.1 Oncology CenterI.M.Sechenov First Moscow State Medical University(Sechenov University)Ministry of Health of the Russian FederationMoscow 119991Russia Department of Laser Micro- Nano-and BiotechnologyInstitute of Engineering Physics for BiomedicineNational Research Nuclear University MEPhIMoscow 115409Russia

Cholangiocellular cancer(CCC)is an oncological disease of the bile ducts characterized by a high mortality *** date,the use of standard methods for the diagnosis and treatment of CCC has not been able to reduce mortality from this *** work presents the results of fluorescence diagnostics(FD),which consists in using a modified optical fiber and photodynamic therapy(PDT)using a therapeutic laser instead of a low-intensity *** technique was tested on 43 patients in a clinical *** results obtained indicate a direct correlation between spectroscopic and video FD ***,a direct correlation was found between the photobleaching of a chlorin e6-based photosensitizer,with the commercial names of PhotoIon Radachlorin and Photoran and stricture *** findings demonstrate the possibility of using a therapeutic laser with a wavelength of 660 nm for both diagnosis and treatment of bile ducts cancer,which results in a significant reduction of the operation time without decreasing its effectiveness.

关键词： cholangiocellular cancer(CCC) fluorescent diagnostics(FD) photodynamic therapy(PDT) chlorin e6 PhotoIon spectroscopic method video fluorescent method photobleaching cancer bile ducts tumor intraoperation diagnostics photosensitizer(PS)

Study of possibility of cell recognition in brain tumors

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Frontiers of Optoelectronics 2020年第4期13卷 371-380页

作者： Yulia S.MAKLYGINA Alexei S.SKObELTSIN Tatiana A.SAVELIEVA Galina V.PAVLOVA Ivan V.CHEKHONIN Olga I.GURINA Anastasiya A.Chernysheva Sergey A.Cherepanov victor b.loschenov Prokhorov General Physics Institute of the Russian Academy of Sciences Moscow 119991.Russia National Research Nuclear University MEPhI Moscow 115409Russia Institute of Gene biology Russian Academy of SciencesMoscow 119334Russia burdenko Neurosurgical Institute Moscow 125047Russia Serbsky National Medical Research Centre of Psychiatry and Narcology under the RF Ministry of Public Health Moscow 119034.Russia

The brain has an exceptionally high requirement for energy metabolism,with glucose serving as the exclusive energy ***,including glioblastoma,have a high glucose uptake and rely on aerobic glycolysis for energy *** alternation of high-efficiency oxidative phosphorylation to a low-efficiency aerobic glycolysis pathway(Warburg effect)provides macromolecules for biosynthesis and *** research indicates that the specific metabolism in the tumor tissue and nonnal brain tissue in the glioma allows the use of 5-aminolevulinic acid(5 ALA)-induced protoporphyrin IX(PpIX)and methylene blue(Mb)to monitor and correct the development of the *** focus is on the detection of the differences between tumor cells and tumorassociated macrophages/microglia using spectroscopic and microscopic methods,based on the fluorescent signals and the difference in the drug accumulation of photosensitizers(PSs).Since 5 ALA has long been used effectively in the clinic for fluorescent surgical navigation,it was employed as an agent to identify the localization of tumor tissue and study its composition,particularly tumor and immune cells(macrophages),which have also been shown to actively accumulate ***,since PpIX is photodynamically active,it can be considered effective as the main target of tumor tissue for further successful photodynamic *** was employed to visualize resident microglia,which is important for their activation/deactivation to prevent the reprogramming of the immune cells by the ***,using two drugs,it is possible to prevent crosstalk between tumor cells and the immune cells of different geneses.

关键词： fluorescent diagnostics spectroscopic method video fluorescent method photosensitizer(PS) brain microglia macrophages 5-aminolevulinic acid(5 ALA) methylene blue(Mb)

Proliferative vitreoretinopathy and its relationship with inflammatory serum biomarkers

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International Journal of Ophthalmology(English edition) 2024年第9期17卷 1659-1664页

作者： victor Alejandro Martinez Pacheco Sergio Rojas Juarez braulio Hernan Velasco Sepulveda Abel Ramirez Estudillo Hospital de Nuestra Señora de la Luz Retina and Vitreous DepartmentMexico City 06030Mexico Instituto de Oftlamología FAP Conde de Valenciana Mexico City 06080Mexico

AIM:To analyze if a relationship between levels ofinflammatory serum biomarkers and severity of primaryproliferative vitreoretinopathy(PVR)***:A retrospective case-control *** adult patients with rhegmatogenous retinaldetachment and primary PVR were included in the *** the control group,healthy adults who underwentcataract surgery were *** grade of PVR wasclassified according to the Retinal Society *** samples were obtained before surgery,and processed in MYTHIC *** of interest wereneutrophil-to-lymphocyte ratio(NLR),platelet-to-lymphocyteratio(PLR),and lymphocyte-to-monocyte ratio(LMR),thetime between the decrease in visual acuity and surgery,PVRgrade,type of surgery,final best corrected visual acuity,andrate of ***:Totally 240 patients were included,120 ineach group,79(65.8%)and 56(46.7%)were male in thePVR and control group,*** A had greaterlevels of monocytes(0.28±0.18 vs 0.12±0.32,P=0.002),neutrophils(4.59±1.51 vs 3.92±1.27,P=0.006),and LMR(9.32±4.42 vs 7.43±3.90,P=0.01).PVR b had a greatermonocyte count(0.30±0.13 vs 0.12±0.32,P=0.001),andPVR C demonstrated higher levels in monocytes(0.27±0.12vs 0.12±0.32,P=0.004),neutrophils(4.39±1.13 vs3.92±1.27,P=0.004),and LMR(9.63±3.24 vs 7.43±3.90,P=0.002)compared to control,*** LMR cut-offvalue of 9.38 predicted PVR with a sensibility of 54.2%andspecificity of 77.5%and NLR cut-off of 1.70 predicted PVRwith a sensibility of 62%and specificity of 54.2%.CONCLUSION:Patients with primary PVR demonstrategreater neutrophil,monocyte,and LMR levels than thecontrol ***-off values obtained from ratios could beuseful in a clinical setting when no posterior view of thefundus is possible due to media opacity.

关键词： biomarkers proliferative vitreoretinopathy retinal detachment inflammation serum

Robust Machine Learning Technique to Classify COVID-19 Using Fusion of Texture and Vesselness of X-Ray Images

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Computer Modeling in Engineering & Sciences 2024年第2期138卷 1981-2004页

作者： Shaik Mahaboob basha victor Hugo Cde Albuquerque Samia Allaoua Chelloug Mohamed Abd Elaziz Shaik Hashmitha Mohisin Suhail Parvaze Pathan Department of Electronics and Communication Engineering N.B.K.R.Institute of Science&TechnologyVidyanagarAndhra Pradesh524413India Department of Teleinformatics Engineering Federal University of CearáFortaleza60455-970Brazil Information Technology Department College of Computer and Information SciencesPrincess Nourah bint Abdulrahman UniversityRiyadh84428Saudi Arabia Department of Mathematics Faculty of ScienceZagazig UniversityZagazig44519Egypt Faculty of Computer Science and Engineering Galala UniversitySuez435611Egypt Artificial Intelligence Research Center(AIRC) College of Engineering and Information TechnologyAjman UniversityAjmanUnited Arab Emirates Department of Electrical and Computer Engineering Lebanese American UniversityByblos13-5053Lebanon Department of Avionics Indian Institute of Space Science and TechnologyThiruvananthapuramKerala695547India Department of Veterinary Clinical Sciences University of MinnesotaSt.PaulMinnesota55108USA

Manual investigation of chest radiography(CXR)images by physicians is crucial for effective decision-making in COVID-19 ***,the high demand during the pandemic necessitates auxiliary help through image analysis and machine learning *** study presents a multi-threshold-based segmentation technique to probe high pixel intensity regions in CXR images of various pathologies,including normal *** information is extracted using gray co-occurrence matrix(GLCM)-based features,while vessel-like features are obtained using Frangi,Sato,and Meijering *** learning models employing Decision Tree(DT)and RandomForest(RF)approaches are designed to categorize CXR images into common lung infections,lung opacity(LO),COVID-19,and viral pneumonia(VP).The results demonstrate that the fusion of texture and vesselbased features provides an effective ML model for aiding *** ML model validation using performance measures,including an accuracy of approximately 91.8%with an RF-based classifier,supports the usefulness of the feature set and classifier model in categorizing the four different ***,the study investigates the importance of the devised features in identifying the underlying pathology and incorporates histogrambased *** analysis reveals varying natural pixel distributions in CXR images belonging to the normal,COVID-19,LO,and VP groups,motivating the incorporation of additional features such as mean,standard deviation,skewness,and percentile based on the filtered ***,the study achieves a considerable improvement in categorizing COVID-19 from LO,with a true positive rate of 97%,further substantiating the effectiveness of the methodology implemented.

关键词： Chest radiography(CXR)image COVID-19 classifier machine learning random forest texture analysis

The transition from backarc extension to Andean growth:Insights from geochronologic,sedimentologic,and structural studies of Mesozoic and Cenozoic sedimentary and volcanic rocks in south-central Chile(36°S)

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Geoscience Frontiers 2024年第5期15卷 93-117页

作者： Alfonso Encinas Nicolás Henríquez Daniel Castro Darío Orts Diego Kietzmann Franco Iovino Paulo Vásquez Andrés Folguera victor Valencia Facundo Fuentes Departamento de Ciencias de la Tierra Facultad de Ciencias QuímicasUniversidad de ConcepciónVíctor Lamas 1290Concepción 4030000Chile Universidad Nacional de Río Negro.Instituto de Investigación en Paleobiología y Geología.General Roca Río NegroArgentina Instituto de Investigación en Paleobiología y Geología(IIPG).CONICET.Av.J.A.Roca 1242 8332 General RocaRío NegroArgentina Universidad de buenos Aires Facultad de Ciencias Exactas y NaturalesDepartamento de Ciencias GeológicasCiudad UniversitariaPabellón IIIntendente Güiraldes 2160C1428EHA Ciudad Autónoma de Buenos AiresArgentina CONICET-Universidad de buenos Aires Instituto de Geociencias BásicasAmbientales y Aplicadas de Buenos Aires(IGeBA)Ciudad UniversitariaPabellón IIIntendente Güiraldes 2160C1428EHA Ciudad Autónoma de Buenos AiresArgentina Instituto de Estudios Andinos‘‘Don Pablo Groeber”(IDEAN) CONICET-Universidad de Buenos AiresBuenos AiresArgentina Facultad de Ciencias Exactas y Naturales Universidad de Buenos AiresBuenos AiresArgentina Washington State University School of the EnvironmentPullmanUSA Yacimientos Petrolíferos Fiscales(YPF)S.A. Buenos AiresArgentina

Many studies propose a significant shift in the tectonic and paleogeographic evolution of the Andes in south-central Chile and Argentina during the Late *** has been proposed that the preceding Jurassic-Early Cretaceous extensional regime that resulted in a low-relief volcanic arc and the backarc Neuquén basin came to an end,giving way to shortening and Andean growth from the Late Cretaceous ***,there are disagreements regarding the timing and nature of this transition to Andean *** address these issues,we conducted geochronologic(U-Pb and^(40)Ar/&(39)Ar),sedimentologic,and structural studies on Mesozoic-Cenozoic sedimentary and volcanic rocks in the Río Maule area(Principal Cordillera,Chile,36°S).From our findings and prior analyses,we propose the following tectono-stratigraphic evolution of the region.(1)Marine deposition of the Tithonian-Hauterivian baños del Flaco Formation took place in an extensional backarc basin.(2)After a~40 Myr hiatus,fluvial deposits of the Colimapu Formation and volcanic rocks of the Plan de los Yeuques Formation accumulated during the *** the Colimapu Formation displays evidence of syndepositional shortening,the Plan de los Yeuques Formation exhibits synextensional growth *** to other studies,our results suggest that the Chilean part of the Principal Cordillera was largely a zone of active deposition rather than an elevated fold-thrust belt during the Late *** propose that sedimentation occurred within a series of relatively stable intermontane subbasins generated by shortening,followed by extension.(3)After a~20 Myr hiatus,middle Eocene to early Miocene(Lutetian-Aquitanian)accumulation of a thick succession of andesitic lavas and minor clastic sediments of the Abanico Formation occurred in an intraarc extensional basin.(4)Finally,major shortening and uplift of previously deposited Mesozoic-Cenozoic rocks took place throughout the *** phase constitu

关键词： Andes South-central Chile backarc basin Foreland basin Fold-thrust belt

A new oxidative pathway of nitric oxide production from oximes in plants

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Molecular Plant 2024年第1期17卷 178-198页

作者： Pedro Lopez-Gomez Javier buezo Marina Urra Alfonso Cornejo Raquel Esteban Jorge Fernandez de los Reyes Estibaliz Urarte Estefania Rodriguez-Dobreva Alejandro Chamizo-Ampudia Alejandro Eguaras Sebastian Wolf Daniel Marino victor Martinez-Merino Jose F.Moran Institute for Multidisciplinary Research in Applied biology(IMAb) Department of SciencesPublic University of Navarre(UPNA)Avda.de Pamplona 12331192 MutilvaSpain Institute for Advanced Materials and Mathematics(INAMAT2) Department of SciencesPublic University of Navarre(UPNA)Campus de Arosadia31006 PamplonaSpain Department of Plant biology and Ecology University of the Basque Country(UPV/EHU)Sarriena s/nApdo.64448080 BilbaoSpain Center for Plant Molecular biology(ZMbP) University of TubingenGeschwister-Scholl-Platz72074 TubingenGermany Institute of Natural Resources and Agrobiology of Salamanca(IRNASA) Department of Plant-Microorganism InteractionsSpanish National Research Council(CSIC)Cordel de Merinas40-5237008SalamancaSpain Department of biochemistry Area of Molecular BiologyVeterinary FacultyUniversity of LeonCampus de Vegazanas/n.24071 LeonSpain

Nitric oxide(NO)is an essential reactive oxygen species and a signal molecule in *** several studies have proposed the occurrence of oxidative NO production,only reductive routes for NO production,such as the nitrate(NO_(3)^(-))-upper-reductase pathway,have been evidenced to date in land ***,plants grown axenically with ammonium as the sole source of nitrogen exhibit contents of nitrite and NO3−,evidencing the existence of a metabolic pathway for oxidative production of *** hypothesized that oximes,such as indole-3-acetaldoxime(IAOx),a precursor to indole-3-acetic acid,are intermediate oxidation products in NO *** detected the production of NO from IAOx and other oximes catalyzed by peroxidase(POD)enzyme using both 4-amino-5-methylamino-2′,7′-difluorescein fluorescence and *** stimulated the reaction,while superoxide dismutase inhibited ***,mouse NO synthase can also use IAOx to produce NO at a lower rate than *** provided a full mechanism for POD-dependent NO production from IAOx consistent with the experimental data and supported by density functional theory *** showed that the addition of IAOx to extracts from Medicago truncatula increased the in vitro production of NO,while in vivo supplementation of IAOx and other oximes increased the number of lateral roots,as shown for NO donors,and a more than 10-fold increase in IAOx dehydratase ***,we found that in vivo supplementation of IAOx increased NO production in Arabidopsis thaliana wild-type plants,while prx33-34 mutant plants,defective in POD33-34,had reduced *** data show that the release of NO by IAOx,as well as its auxinic effect,explain the superroot ***,our study reveals that plants produce NO utilizing diverse molecules such as oximes,POD,and flavins,which are widely distributed in the plant kingdom,thus introducing a long-awaited oxidative pathway to NO production in plants.T

关键词： ammonium oxidation auxin nitric oxide oxime peroxidase root phenotype

Toward a nomenclature consensus for diverse intelligent systems:Call for collaboration

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The Innovation 2024年第5期5卷 32-34页

作者： brett J.Kagan Michael Mahlis Anjali bhat Josh bongard victor MCole Phillip Corlett Christopher Gyngell Thomas Hartung bianca Jupp Michael Levin Tamra Lysaght Nicholas Opie Adeel Razi Lena Smirnova Ian Tennant Peter Thestrup Wade Ge Wang Cortical Labs BrunswickVIC 3056Australia Wellcome Centre for Human Neuroimaging University College LondonLondon WC1N 3ARUK University of Vermont BurlingtonVT 05405USA Centre for Professional Communication Singapore Institute of TechnologySingapore 138683Singapore Department of Psychiatry Yale UniversityNew HavenCT 06511USA Murdoch Children’s Research Institute ParkvilleVIC 3052Australia Centre for Alternatives to Animal Testing(CAAT) Bloomberg School of Public Health and Whiting School of EngineeringJohns Hopkins UniversityDoerenkamp-Zbinden Chair for Evidence-based ToxicologyBaltimoreMD 21205USA CAAT-Europe University of Kostanz78464 KostanzGermany Department of Neuroscience Central Clinical SchoolMonash UniversityPrahranVIC 3004Australia Allen Discovery Centre at Tufts University MedfordMA 02155USA Yong Loo Lin School of Medicine National University of SingaporeSingapore 117597Singapore Faculty of Medicine and Health Sydney School of Public Health The University of SydneyCamperdownNSW 2050Australia Department of Medicine University of MelbourneParkvilleVIC 3010Australia Turner Institute for brain and Mental Health Monash UniversityClaytonVIC 3168Australia Center for Alternatives to Animal Testing(CAAT) Bloomberg School of Public Health and Whiting School of EngineeringJohns Hopkins UniversityBaltimoreMD 21205USA Faculty of Engineering AgriTech and EnvironmentAnglia Ruskin UniversityPeterborough PE15BWUK Interacting Minds Centre Aarhus University8000 Aarhus CDenmark Department of biomedical Engineering School of EngineeringBiomedical Imaging CenterCenter for Biotechnology and Interdisciplinary StudiesRensselaer Polytechnic InstituteTroyNY 12180USA Department of biochemistry and Pharmacology University of MelbourneParkvilleVIC 3010Australia

Disagreements about language use are common both between and within *** interests require multidisciplinary collaboration or the field of research has the potential to impact society at large,it becomes critical to minimize these disagreements where *** development of diverse intelligent systems,regardless of the substrate(e.g.,silicon ***),is a case where both conditions are *** advancements have occurred in the development of technology progressing toward these diverse intelligence *** progress is silicon based,such as the use of large language models,or through synthetic biology methods,such as the development of organoids,a clear need for a community-based approach to seeking consensus on nomenclature is now ***,we welcome collaboration from the wider scientific community,proposing a pathway forward to achieving this intention,highlighting key terms and fields of relevance,and suggesting potential consensus-making methods to be applied.

关键词： seeking collaboration diverse

Environmental determinants of social wasp diversity and assemblage structure in an Amazonian archipelagic landscape

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Zoological Research(Diversity and Conservation) 2024年第2期1卷 121-129页

作者： Jose victor Alves Ferreira Alexandre Somavilla Maíra benchimol Ana Filipa Palmeirim Carlos A.Peres Danielle Storck-Tonon Laboratório de Ecologia Aplicada àConservação Universidade Estadual de Santa CruzIlhéus 45662-900Brazil Instituto Nacional de Pesquisas da Amazônia Coordenação de BiodiversidadeManaus 69067-001Brazil CIbIO Centro de Investigação em Biodiversidade e Recursos GenéticosInBIO Laboratório AssociadoCampus de VairãoUniversidade do PortoVairão 4485-661Portugal bIOPOLIS Program in Genomics Biodiversity and Land PlanningCIBIOCampus de VairãoVairão 4485-661Portugal School of Environmental Sciences University of East AngliaNorwich NR47TJUK Instituto Juruá Manaus69057-060Brazil Programa de Pós-Graduação em Ambiente e Sistemas de Produção Agrícola(PPGASP) Universidade do Estado de Mato GrossoTangaráda Serra 78300-970Brazil

Hydropower development has become an important driver of habitat loss and fragmentation across lowland tropical *** ample evidence on the detrimental effects of insular habitat fragmentation on biodiversity,invertebrate taxa,that may be critical to ecosystem functioning,have been *** assessed the assemblage-level responses of social wasps to forest insularization induced by the balbina Hydroelectric Dam in Central brazilian *** Malaise trapping,we captured wasps on 27 forest islands and three continuous *** constructed Generalized Linear Models and employed a model selection approach to examine the impact of local variables(fire severity(FIRE)and basal area of pioneer tree species(PIONEER))and landscape-scale variables(amount of habitat(COVER))on patterns of species richness,composition,and body size of wasps.A total of 374 individuals(29 species)were collected across all sampling *** was the main predictor of species richness,while PIONEER was the only variable that explained variation in community composition,with a negative effect on body *** results add evidence to the pervasive impacts of large hydroelectric dams on tropical forest biodiversity,and suggest that social wasps,among other invertebrates,can be used as bioindicators in infrastructure development projects.

关键词： Habitat amount hypothesis Habitat fragmentation Habitat loss Hydroelectric dams Invertebrates

Machine learning methods for rockburst prediction-state-of-the-art review

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International Journal of Mining Science and Technology 2019年第4期29卷 565-570页

作者： Yuanyuan Pu Derek b.Apel victor Liu Hani Mitri School of Mining and Petroleum Engineering University of AlbertaEdmonton T6G 2R3Canada Department of Mining and Materials Engineering McGill UniversityMontreal H3A 2T6Canada

One of the most serious mining disasters in underground mines is rockburst *** can lead to injuries and even fatalities as well as damage to underground openings and mining *** has forced many researchers to investigate alternative methods to predict the potential for rockburst ***,due to the highly complex relation between geological,mechanical and geometric parameters of the mining environment,the traditional mechanics-based prediction methods do not always yield precise *** the emergence of machine learning methods,a breakthrough in the prediction of rockburst occurrence has become possible in recent *** paper presents a state-ofthe-art review of various applications of machine learning methods for the prediction of rockburst ***,existing rockburst prediction methods are introduced,and the limitations of such methods are highlighted.A brief overview of typical machine learning methods and their main features as predictive tools is then *** current applications of machine learning models in rockburst prediction are surveyed,with related mechanisms,technical details and performance analysis.

关键词： Rockburst prediction burst liability Artificial neural network Support vector machine Deep learning