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Ad Hoc File Systems for High-Performance Computing

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Journal of Computer Science & Technology 2020年第1期35卷 4-26页

作者： AndréBrinkmann Kathryn Mohror Weikuan Yu Philip Carns toni cortes Scott A.Klasky Alberto Miranda Franz-Josef Pfreundt Robert B.Ross Marc-AndréVef Zentrum für Datenverarbeitung Johannes Gutenberg University MainzMainz 55128Germany Center for Applied Scientific Computing Lawrence Livermore National LaboratoryLivermoreCA 94550U.S.A Department of Computer Science Florida State UniversityTallahasseeFL 32306U.S.A Mathematics and Computer Science Division Argonne National LaboratoryLemontIL 60439U.S.A Department of Computer Architecture Universitat Politecnica de CatalunyaBarcelona 08034Spain Computer Science and Mathematics Division Oak Ridge National LaboratoryOak RidgeTN 37831U.S.A Computer Science Department Barcelona Supercomputing CenterBarcelona 08034Spain Fraunhofer Institute for Industrial Mathematics ITWM Fraunhofer-Platz 1Kaiserslautern 67663Germany

Storage backends of parallel compute clusters are still based mostly on magnetic disks,while newer and faster storage technologies such as flash-based SSDs or non-volatile random access memory(NVRAM)are deployed within compute *** these new storage technologies into scientific workflows is unfortunately today a mostly manual task,and most scientists therefore do not take advantage of the faster storage *** approach to systematically include nodelocal SSDs or NVRAMs into scientific workflows is to deploy ad hoc file systems over a set of compute nodes,which serve as temporary storage systems for single applications or longer-running *** paper presents results from the Dagstuhl Seminar 17202"Challenges and Opportunities of User-Level File Systems for HPC"and discusses application scenarios as well as design strategies for ad hoc file systems using node-local storage *** discussion includes open research questions,such as how to couple ad hoc file systems with the batch scheduling environment and how to schedule stage-in and stage-out processes of data between the storage backend and the ad hoc file *** presented are strategies to build ad hoc file systems by using reusable components for networking and how to improve storage device *** interfaces and semantics are presented,for example those used by the three ad hoc file systems BeeOND,GekkoFS,and *** presentation covers a range from file systems running in production to cutting-edge research focusing on reaching the performance limits of the underlying devices.

关键词： parallel architectures distributed file system high-performance computing burst buffer POSIX(portable operating system interface)

Verdier quotients of homotopy categories of rings and Gorenstein-projective precovers

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Science China Mathematics 2024年第12期67卷 2701-2712页

作者： Manuel cortes-Izurdiaga Departamento de Matematica Aplicada Universidad de MalagaMalaga 29071Spain

Let R be a ring, Proj be the class of all the projective right R-modules, K be the full subcategory of the homotopy category K(Proj) whose class of objects consists of all the totally acyclic complexes, and MorK be the class of all the morphisms in K(Proj) whose cones belong to K. We prove that if K(Proj) has enough MorK-injective objects, then the Verdier quotient K(Proj)/K has small Hom-sets, and this last condition implies the existence of Gorenstein-projective precovers in Mod-R and of totally acyclic precovers in C(Mod-R).

关键词： homotopy category Gorenstein-projective precover Verdier quotient small Hom-sets totally acyclic complex

Average Current Control with Internal Model Control and Real-time Frequency Decoupling for Hybrid Energy Storage Systems in Microgrids

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Journal of Modern Power Systems and Clean Energy 2023年第2期11卷 511-522页

作者： Alejandro Latorre Wilmar Martinez Camilo A.cortes EMC-UN Research Group Universidad Nacional de ColombiaBogotaColombia KU Leuven Campus DiepenbeekEnergy Ville 1-GenkBelgiumDiepenbeekBelgium

Among hybrid energy storage systems(HESSs),battery-ultracapacitor systems in active topology use DC/DC power converters for their *** are part of the solutions designed to improve the operation of power systems in different *** the residential microgrid applications,a multilevel control system is required to manage the available energy and interactions among the microgrid *** this purpose,a rule-based power management system is designed,whose operation is validated in the simulation,and the performances of different controllers are compared to select the best strategy for the DC/DC *** average current control with internal model control and real-time frequency decoupling is proposed as the most suitable controller according to the contemplated performance parameters,allowing voltage regulation values close to 1%.The results are validated using real-time hardware-in-the-loop(HIL).These systems can be easily adjusted for other applications such as electric vehicles.

关键词： Internal model control energy management system(EMS) hybrid energy storage system(HESS) microgrids real-time frequency decoupling

Sizing and Siting of Battery Energy Storage Systems:A Colombian Case

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Journal of Modern Power Systems and Clean Energy 2022年第3期10卷 700-709页

作者： Alvaro Avendano Pena David Romero-Quete Camilo A.cortes Department of Electrical and Electronics Engineering Universidad Nacional de ColombiaBogotaColombia

This paper presents a mixed-integer linear programming(MILP)formulation for sizing and siting of battery energy storage systems(BESSs).The problem formulation seeks to minimize both operation costs and BESS *** proposed model includes restrictions of the conventional securityconstrained unit commitment problem,a piece-wise linear approximation to model power losses,and a linear model of hydro generation *** proposed model is tested in a 6-bus test system and a 15-bus system representing the Colombian power *** the two studied systems,simulation results show that the reduction of operation costs due to the installation of BESSs compensates the investments,under some of the considered technical cost ***,results show that adequate sizing and siting of BESSs reduce renewable energy curtailment in the Colombian power system with high penetration of fluctuating renewable generation.

关键词： Battery energy storage curtailment sizing and siting renewable energy

Simulated predation pressure in Pelobates Cultripes tadpoles modulates morphology at the metamorphic stage

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Current Zoology 2019年第6期65卷 651-656页

作者： Francisco Javier ZAMORA-CAMACHO Susana cortes-MANZANEOUE Pedro ARAGON Museo Nacional de Ciencias Naturales(MNCN-CSIC) MadridSpain

Studies on the impacts of variation of biotic interactions at key life cycle stages are crucial to understand the interface between ecological and developmental *** exert a major impact on prey *** direct consumption entails the greatest effect,predators can affect prey by means of other *** instance,injuries inflicted by failed predation attempts can jeopardize prey fitness,even beyond the *** anuran tadpoles,failed predation typically results in partial tail loss,which is known to reduce swimming ***,the potential consequences of tadpole partial tail loss after metamorphosis remain *** tail materials could be important in conforming metamorph body,we assess the effects of tadpole partial tail loss on metamorph body size in Iberian spadefoot toads Pelobates *** clipped 55%tail length of pre-tail-resorption stage anesthetized tadpoles,and compared their body size as metamorphs with anesthetized and non-anesthetized non-tail-clipped ***,we tested whether tail length correlated with metamorph body size of individuals of the control *** tadpoles produced smaller metamorphs than both controls(the bdy size of metamorphs from both controls was similar),which could incur costs in mid-term survival or time to first *** effect could be particularly important in areas with introduced predators,if autochthonous tadpoles lack defenses against *** suggest that materials resorbed from tadpole tail tissues might be reallocated into metamorph body,according to the negative effect of shorter tails in a correlational analysis,and clipped tails in an experimental test,on metamorph body size.

关键词： amphibian anuran body condition body size failed predation partial tail loss

Optimal microgrid planning for enhancing ancillary service provision

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Journal of Modern Power Systems and Clean Energy 2019年第4期7卷 862-875页

作者： Sergio F.CONTRERAS Camilo A.cortes Johanna M.A.MYRZIK Institute of Automation Technology University of BremenOtto-Hahn-Allee 1 NW1/M1050(70)28359 BremenGermany Department of Electrical and Electronics Engineering Universidad Nacional de ColombiaCarrera 30 Calle 45.Ciudad Universitaria Edificio 453Bogota′Colombia

Microgrids have presented themselves as an effective concept to guarantee a reliable,efficient and sustainable electricity delivery during the current transition era from passive to active distribution ***,microgrids could offer effective ancillary services(AS)to the power utility,although this will not be possible before the traditional planning and operation methodologies are ***,a probabilistic multi-objective microgrid planning(POMMP)methodology is proposed in this paper to contemplate the large number of variables,multiple objectives,and different constraints and uncertainties involved in the microgrid *** planning methodology is based on the optimal size and location of energy distributed resources with the goal of minimizing the mismatch power in islanded mode,while the residual power for AS provision and the investment and operation costs of the microgrid in grid-connected mode are maximized and minimized,*** that purpose,probabilistic models and a true multi-objective optimization problem are implemented in the *** methodology is tested in an adapted PG&E 69-bus distribution system and the non-dominated sorting genetic algorithmⅡ(NSGA-Ⅱ)optimization method and an analytic hierarchy process for decision-making are used to solve the optimization problem.

关键词： Microgrid Ancillary services(AS) Planning Multi-objective optimization Decision-making

Associations between testicular development and fetal size in the pig

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Journal of Animal Science and Biotechnology 2022年第5期13卷 1340-1350页

作者： Claire Stenhouse Yennifer cortes-Araya F.Xavier Donadeu Cheryl J.Ashworth Functional Genetics and Development Division The Roslin Institute and Royal(Dick)School of Veterinary StudiesUniversity of EdinburghMidlothianUK Department of Animal Science Texas A&M University440 Kleberg CenterCollege StationTX 77843-2471USA

Background:Impaired reproductive performance is the largest contributing factor for the removal of boars from commercial *** growth restricted piglets represent 25%of the total number of piglets born and have impaired reproductive *** study aimed to improve the understanding of temporal changes in testicular gene expression during testes development in fetuses of different *** lightest and closest to mean litter weight(CTMLW)male Large White×Landrace littermates were collected at gestational days(GD)45,60 and 90(n=5-6 litters/GD).Results:Testes weight and testes weight as a percentage of fetal weight were not associated with fetal size at GD60 or *** plasma testosterone was not associated with fetal size at *** was no association between fetal size and seminiferous tubule area and number,number of germ or Sertoli cells per *** lightest fetuses tended to have wider seminiferous tubules compared to the CTMLW fetuses at GD90(P=0.077).The testicular expression of KI67(P≤0.01)and BAX:BCL2 ratio(P=0.058)mRNAs decreased as gestation *** SPP1 mRNA expression was observed at GD60 when compared with GD45 and 90(P≤0.05).Lower expression of DMRT1 and SPP1(P<0.01)mRNAs was observed in testes associated with the lightest fetuses compared to the CTMLW fetuses at ***:These findings provide novel insights into the expression profiles of genes associated with testicular development and ***,these data suggest that programming of reproductive potential in IUGR boars occurs late in gestation,providing a platform for further mechanistic investigation.

关键词： Fetal growth Intrauterine growth restriction(IUGR) Porcine Pregnancy Testes

Sexual dimorphism in immune response： Testing the hypothesis in an insect species with two male morphs

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Insect Science 2013年第5期20卷 620-628页

作者： Gloria Ruiz-Guzman Jorge Canales-Lazcano Jesus Guillermo Jimenez-cortes Jorge Contreras-Garduno Centro de Investigacion Sobre Enfermedades Infecciosas Instituto Nacional de Salud Publica Av. Universidad No. 655 C. P. 62100 Cuernavaca Morelos Departamento de Biologia Divisi6n de Ciencias Naturales y Exactas Universidad de Guanajuato Guanajuato Departamento de Ecologia Evolufiva Instituto de Ecologia Universidad Nacional Autonoma de Mexico Apdo. Postal 70-275 04510 Mexico D. F. Mexico

It has been proposed that given that males should invest in sexual traits at the expense of their investment in immune response, females are better immunocompetent than males. Typically, this idea has been tested in monomorphic species, but rarely has been evaluated in polymorphic male species. We used Paraphlebia zoe, a damselfly with two male morphs： the black-winged morph （Black-W） develop black spots as sexual traits and the hyaline-winged morph （Hyaline-W） resembles a female in size and wings color. We predicted that Black-W should have a lower immune response than Hyaline-W, but that the latter males should not differ from females in this respect. Nitric oxide （NO） and phenoloxidase （PO） production, as well as hemolymph protein content, were used as immune markers. Body size （wing length） was used as an indicator of the male condition. The results show that, as we predicted, females and Hyaline-W had higher values of NO than Black-W, corresponding to differences in size. However, the opposite was found in relation to PO production. Females had the highest levels of hemolymph protein content, whereas no differences were found between Black-W and Hyaline-W. These results partially support the sexual selection hypothesis and are discussed in the context of the life history of this species. Black-W, Hyaline-W, and females could express the immune markers that are prioritized by their particular condition, and probably neither of them could express all immune markers in an elevated manner, as this would result in an excessive accumulation of free radicals.

关键词： immune response male morphs Paraphlebia zoe polymorphic species,territoriality trade-off

Fitness consequences of altering floral circadian oscillations for Nicotiana attenuata

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Journal of Integrative Plant Biology 2017年第3期59卷 180-189页

作者： Felipe Yon Danny Kessler Youngsung Joo Lucas cortes Llorca Sang-Gyu Kim Ian T. Baldwin Department of Molecular Ecology Max Planck Institute for Chemical Ecology Hans-Knoll-Straβe 8 D-07745 Jena Germany Center for Genome Engineering Institute for Basic Science Yuseong-gu 34047 Daeieon South Korea

Ecological interactions between flowers and pollinators are all about timing. Flower opening/closing and scent emissions are largely synchronized with pollinator activity, and a circadian clock regulates these rhythms. However, whether the circadian clock increases a plant＇s reproductive success by regulating these floral rhythms remains untested. Flowers of Nicotiana attenuata, a wild tobacco, diurnally and rhythmically open, emit scent and move vertically through a 140° arc to interact with nocturnal hawkmoths. We tethered flowers to evaluate the importanceof flower positions for Manduca flower position dramatically sexta-mediated pollinations; nfluenced pollination. We examined the pollination success of phase-shifted flowers, silenced in circadian clock genes, NaZTL, NaLHY, and NaTOCI, by RNAi. Circadian rhythms in N. attenuata flowers are responsible for altered seed set from outcrossed pollen.

关键词： Yonggen Lou Zhejiang University China