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Olfactory receptors in neural regeneration in the central nervous system

neural Regeneration Research 2025年第9期20卷 2480-2494页

作者： Rafael Franco Claudia Garrigós Toni Capó Joan serrano-Marín Rafael Rivas-santisteban Jaume Lillo Molecular neurobiology Laboratory Department of Biochemistry and Molecular BiomedicineFacultat de BiologiaUniversitat de BarcelonaBarcelonaSpain Ciberned network Center for Biomedical Research in neurodegenerative Diseases Spanish National Health Institute Carlos ⅢMadridSpain school of Chemistry Universitat de BarcelonaBarcelonaSpain Department of Biochemistry and Physiology School of Pharmacy and Food SciencesUniversitat de BarcelonaBarcelonaSpain Laboratory of Computational Medicine Biostatistics UnitFaculty of MedicineAutonomous University of BarcelonaCampus BellaterraBarcelonaSpain

Olfactory receptors are crucial for detecting odors and play a vital role in our sense of smell,influencing behaviors from food choices to emotional *** receptors also contribute to our perception of flavor and have potential applications in medical diagnostics and environmental *** ability of the olfactory system to regenerate its sensory neurons provides a unique model to study neural regeneration,a phenomenon largely absent in the central nervous *** gained from how olfactory neurons continuously replace themselves and reestablish functional connections can provide strategies to promote similar regenerative processes in the central nervous system,where damage often results in permanent *** the molecular and cellular mechanisms underpinning olfactory neuron regeneration could pave the way for developing therapeutic approaches to treat spinal co rd injuries and neurodegenerative diseases like Alzheimer's *** ctory receptors are found in almost any cell of eve ry orga n/tissue of the mammalian *** ectopic expression provides insights into the chemical structures that can activate olfactory *** addition to odors,olfactory receptors in ectopic expression may respond to endogenous compounds and molecules produced by mucosal colonizing *** analysis of the function of olfactory receptors in ectopic expression provides valuable information on the signaling pathway engaged upon receptor activation and the receptor's role in proliferation and cell differentiation *** review explo res the ectopic expression of olfa ctory receptors and the role they may play in neural regeneration within the central nervous system,with particular attention to compounds that can activate these receptors to initiate regenerative *** suggests that olfactory receptors could serve as potential therapeutic targets for enhancing neural repair and recovery following central nervous syste

关键词： adenosine receptors adrenergic receptors ectopic expression G proteincoupled receptors glia neurons

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Taxonomy,phylogeny and evolution of freshwater Hypocreomycetidae(sordariomycetes)

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Fungal Diversity 2023年第4期121卷 1-94页

作者： Dan‑Feng Bao Kevin D.Hyde saje.wa s.n.maharachchikumbura Rekhani H.Perera Vinodhini Thiyagaraja sinang Hongsanan Dhanushka n.wanasinghe Hong‑Wei shen Xing‑Guo Tian Li‑Quan Yang sarunya nalumpang Zong‑Long Luo College of Agriculture and Biological science Dali UniversityDali 671003YunnanPeople’s Republic of China Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Department of Entomology and Plant Pathology Faculty of AgricultureChiang Mai UniversityChiang Mai 50200Thailand school of science Mae Fah Luang UniversityChiang Rai 57100Thailand Mushroom Research Foundation 128 M.3 Ban Pa Deng T.Pa PaeA.Mae TaengChiang Mai 50150Thailand Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Innovative Institute for Plant Health Zhongkai University of Agriculture and EngineeringHaizhu DistrictGuangzhou 510225GuangdongPeople’s Republic of China school of Life science and Technology University of Electronic Science and Technology of ChinaChengdu 611731SichuanPeople’s Republic of China Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouPeople’s Republic of China College of Life sciences and Oceanography Shenzhen Key Laboratory of Microbial Genetic EngineeringShenzhen UniversityShenzhen 518060China Research Center of Microbial Diversity and sustainable Utilization Faculty of SciencesChiang Mai UniversityChiang Mai 50200Thailand Honghe Center for Mountain Futures Kunming Institute of BotanyChinese Academy of SciencesHonghe 654400YunnanPeople’s Republic of China Center for Yunnan Plateau Biological Resources Protection and Utilization Yunnan Engineering Research Center of Fruit WineCollege of Biological Resource and Food EngineeringQujing Normal UniversityQujing 655011YunnanPeople’s Republic of China school of Food and Pharmaceutical Engineering Guizhou Institute of TechnologyGuiyang 550003Gui ZhouPeople’s Republic of China

Hypocreomycetidae is a highly diverse group with species from various habitats. This subclass has been reported as pathogenic,endophytic, parasitic, saprobic, fungicolous, lichenicolous, algicolous, coprophilous and insect fungi from aquatic andterrestrial habitats. In this study, we focused on freshwater fungi of Hypocreomycetidae which resulted 41 fresh collectionsfrom China and Thailand. Based on morphological and phylogenetic analyses, we identified 26 species that belong to twoorders (Hypocreales and Microascales) and six families (Bionectriaceae, Halosphaeriaceae, Microascaceae, nectriaceae,sarocladiaceae and stachybotryaceae). Ten new species are introduced and 13 new habitats and geographic records arereported. Mariannaea superimposita, stachybotrys chartarum and s. chlorohalonatus are recollected from freshwater habitatsin China. Based on phylogenetic analysis of combined LsU, ITs, ssU, rpb2 and tef1-α sequences data, Emericellopsisis transferred to Hypocreales genera incertae sedis;Pseudoacremonium is transferred to Bionectriaceae;sedecimiella isplaced in nectriaceae;nautosphaeria and Tubakiella are excluded from Halosphaeriaceae and placed in Microascalesgenera incertae sedis;and Faurelina is excluded from Hypocreomycetidae. Varicosporella is placed under Atractium as asynonym of Atractium. In addition, phylogenetic analysis and divergence time estimates showed that Ascocodina, Campylospora,Cornuvesica and Xenodactylariaceae form distinct lineages in Hypocreomycetidae and they evolved in the family/order time frame. Hence, a new order (Xenodactylariales) and three new families (Ascocodinaceae, Campylosporaceae andCornuvesicaceae) are introduced based on phylogenetic analysis, divergence time estimations and morphological *** character state analysis is performed for different habitats of Hypocreomycetidae including freshwater, marineand terrestrial taxa. The result indicates that marine and freshwater fungi evolved independently from terr

关键词： Ancestral character analysis Divergence time estimates Molecular clock analysis Morphology Phylogeny Freshwater fungi

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Four new species and one new country record of Torulla species(Torulaceae,Pleosporales) from sichuan Province,China

Four new species and one new country record of Torulla speci...

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中国菌物学会2023年学术年会

作者： Wenhui Tian Pengwei su Yanpeng Chen saje.wa s.n.maharachchikumbura school of Life science and Technology Center for Informational BiologyUniversity of Electronic Science and Technology of China

Torula is an asexual and hyphomycetous genus in the family *** species are generally *** have a worldwide distribution and abound in humid or freshwater *** order to better understand this genus,we carried out several field collections from sichuan,*** a result,we obtained nine Torula isolates from dead woody substrates in terrestrial and freshwater *** on a biphasic approach of morphological examination and multi-locus phylogenetic analyses(ITs,ssU,LsU,TEF,RPB2),these collections were identified as belonging to seven Torula *** of them were new species(Torula chinensis,Torula longiconidiophora,Torula sichuanensis and Torula submersa),and the other three belonged to existing species,though one was found for the first time in China(Torula masonii).Morphological and updated phylogenetic delamination of the new discoveries is also *** study provides further insights into our understanding of wood-based Torula species in China.

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Brain-derived neurotrophic factor signaling in the neuromuscular junction during developmental axonal competition and synapse elimination

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neural Regeneration Research 2025年第2期20卷 394-401页

作者： Josep Tomàs Víctor Cilleros-Mañé Laia Just-Borràs Marta Balanyà-segura Aleksandra Polishchuk Laura nadal Marta Tomàs Carolina silvera-simón Manel M.santafé Maria A.Lanuza Unitat d’Histologia i neurobiologia(UHneurob) Facultat de Medicina i Ciències de la SalutUniversitat Rovira i VirgiliReusSpain

During the development of the nervous system,there is an overproduction of neurons and *** competition between neighboring nerve endings and synapses performing different activity levels leads to their elimination or *** have extensively studied the involvement of the brain-derived neurotrophic factor-Tropomyosin-related kinase B receptor neurotrophic retrograde pathway,at the neuromuscular junction,in the axonal development and synapse elimination process versus the synapse *** purpose of this review is to describe the neurotrophic influence on developmental synapse elimination,in relation to other molecular pathways that we and others have found to regulate this *** particular,we summarize our published results based on transmitter release analysis and axonal counts to show the different involvement of the presynaptic acetylcholine muscarinic autoreceptors,coupled to downstream serine-threonine protein kinases A and C(PKA and PKC)and voltage-gated calcium channels,at different nerve endings in developmental *** dynamic changes that occur simultaneously in several nerve terminals and synapses converge across a postsynaptic site,influence each other,and require careful studies to individualize the mechanisms of specific *** describe an activity-dependent balance(related to the extent of transmitter release)between the presynaptic muscarinic subtypes and the neurotrophin-mediated TrkB/p75nTR pathways that can influence the timing and fate of the competitive interactions between the different axon *** downstream displacement of the PKA/PKC activity ratio to lower values,both in competing nerve terminals and at postsynaptic sites,plays a relevant role in controlling the elimination of supernumerary ***,calcium entry through L-and P/Q-subtypes of voltage-gated calcium channels(both channels are present,together with the n-type channel in developing nerve terminals)contributes to red

关键词： acetylcholine release adenosine receptors axonal competition brain-derived neurotrophic factor calcium channels motor end-plate muscarinic acetylcholine receptors postnatal synapse elimination serine kinases tropomyosin-related kinase receptorB

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A multi-locus backbone tree for Pestalotiopsis, with a polyphasic characterization of 14 new species

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Fungal Diversity 2012年第5期56卷 95-129页

作者： saje.wa s.n.maharachchikumbura Liang Dong Guo Lei Cai Ekachai Chukeatirote Wen Ping Wu Xiang sun Pedro W.Crous D.Jayarama Bhat Eric H.C.McKenzie Ali H.Bahkali Kevin D.Hyde Institute of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand school of science Mae Fah Luang UniversityChiang Rai 57100Thailand state Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesBeijing 100101People’s Republic of China novozymes China 14 Xin Xi LuShangdi ZoneHaidian DistrictBeijing 100086People’s Republic of China CBs-KnAW Fungal Biodiversity Centre P.O.Box 851673508 ADUtrechtThe Netherlands Department of Botany Goa UniversityPanajiGoa 403206India Landcare Research Private Bag92170AucklandNew Zealand College of science Botany and Microbiology DepartmentKing Saud UniversityP.O.Box:2455Riyadh 1145Saudi Arabia

Pestalotiopsis is a taxonomically confused,pathogenic and chemically creative genus requiring a critical reexamination using a multi-gene phylogeny based on ex-type and ex-epitype *** this study 40 isolates of Pestalotiopsis,comprised of 28 strains collected from living and dead plant material of various host plants from China were studied by means of morphology and analysis of ITs,β–tubulin and tef1 gene sequence *** on molecular and morphological data we describe 14 new species(Pestalotiopsis asiatica,***,***,***,***,***,***,***,***,***,***,***,*** and ***)and three species are epitypified(***,*** and ***).Of the 10 gene regions(ACT,β-tubulin,CAL,GPDH,Gs,ITs,LsU,RPB 1,ssU and tef1)utilized to resolve cryptic Pestalotiopsis species,ITs,β–tubulin and tef1 proved to be the better *** other gene regions were less useful due to poor success in PCR amplification and/or in their ability to resolve species *** a single gene tef1 met the requirements for an ideal candidate and functions well for species delimitation due to its better species resolution and PCR ***β-tubulin showed fairly good differences among species,a combination of ITs,β-tubulin and tef1 gene data gave the best resolution as compared to single gene *** work provides a backbone tree for 22 ex-type/epitypified species of Pestalotiopsis and can be used in future studies of the genus.

关键词： β-tubulin Epitype ITs Phylogeny saprobe tef1

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six Additions to the Genus Periconia(Dothideomycetes:Periconiaceae) from Graminaceous Plants in China

Six Additions to the Genus Periconia(Dothideomycetes:Pericon...

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中国菌物学会2023年学术年会

作者： Pengwei su Zhenghau Lu Wenhui Tian Yanpeng Chen saje.wa s.n.maharachchikumbura school of Life science and Technology Center for Informational BiologyUniversity of Electronic Science and Technology of China

Periconia is a polyphyletic and asexual morphic genus within the family Periconiaceae(Pleosporales).The genus is characterized by a pale to dark brown stipe with an apical conidial head and ellipsoidal to oblong *** of Periconia are widely distributed throughout the world in various hosts,while most species are isolated from graminaceous *** our investigations of microfungal in sichuan Province,China,26Periconia isolates were collected from a wide variety of graminaceous *** isolates corresponded to11 species based on the examination of morphology and multi-locus phylogenetic analysis(ssU,ITs,LsU,TEF1,RPB2).This includes six new species(***,***,***,***,***,and ***) and five new records(***,***,***,***,and ***).A comprehensive description and illustrations of the new species are provided and discussed with comparable *** discoveries expand our knowledge of the species diversity of Periconia taxa in graminaceous plants in China.

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synhelminthosporium *** *** Two new species of Helminthosporium(Massarinaceae,Pleosporales) from sichuan Province,China

Synhelminthosporium *** *** Two New Species of Helminthospor...

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中国菌物学会2023年学术年会

作者： Yanpeng Chen Wenhui Tian Yaobin Guo Hugo Madrid saje.wa s.n.maharachchikumbura school of Life science and Technology Center for Informational BiologyUniversity of Electronic Science and Technology of China Departamento de Tecnología Médica Facultad de Ciencias de la SaludUniversidad de TarapacáSede Iquique

Helminthosporium is a polyphyletic genus in Massarinaceae(Pleosporales).species of Helminthosporium are characterized by having septate and erect conidiophores,acro-pleurogenous and distoseptate conidia with a ring-shaped scar at the *** a survey of fungal diversity in sichuan Province,China,six Helminthosporium-like isolates were collected from dead branches of unknown *** barcodes,including ITs(ITs1-5.8s-ITs2),ssU,LsU,TEF1,and RPB2 were amplified and *** examination and multi-locus phylogenetic analyses revealed two new Helminthosporium species(*** ***.,and *** ***.),a new genus(synhelminthosporium ***.) with a type species synhelminthosporium synnematoferum ***.,and two known species(Helminthosporium submersum and ***) within *** new genus synhelminthosporium differs from the phylogenetically closest genus Helminthosporium by producing synnematous *** work expands our understanding of the diversity of Helminthosporium-like taxa in sichuan Province,China.

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Comparative genomics provides new insights into the evolution of Colletotrichum

Comparative genomics provides new insights into the evolutio...

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中国菌物学会2023年学术年会

作者： Yanpeng Chen Tao Wu Wenhui Tian Evgeny Ilyukhin Kevin Hyde saje.wa s.n.maharachchikumbura school of Life science and Technology Center for Informational BiologyUniversity of Electronic Science and Technology of China swift Current Research and Development Centre Agriculture and Agri-Food Canada Center of Excellence in Fungal Research Mae Fah Luang University Innovative Institute for Plant Health Zhongkai University of Agriculture and Engineering

Colletotrichum is an economically important pathogen with a worldwide distribution associated with a wide range of plant *** of the genomic profiles of Colletotrichum can generate new insights to understand its speciation,diversity,and pathogenicity *** some genomic studies on this genus have been reported,a systematic comparative genomic analysis of the genus has so far been *** this study,we first compared genome completeness generated by second-and third-generation sequencing platforms and confirmed the effectiveness of second-generation sequencing techniques for genomic *** then integrated the taxonomic concept of Colletotrichum species complexes into the comparative genomic analysis and depicted the genomic features of 102 Colletotrichum genomes from 39 species across ten species complexes and two *** sizes of Colletotrichum species vary tremendously(44.15～109.66 Mb),and the average genome sizes of species complexes are significantly *** sequences are the key drivers for genome size and GC content *** number of predicted genes of each genome(10,354～17,809) is positively correlated to the size of non-repeat genome *** close strains consist of similar composition of secretomes,however,the number of major components is significantly different between different species *** *** species complex possessed the most abundant CAZymes,which may be responsible for its diverse distribution and higher pathogenicity.A total of 7,971 putative sMGCs covering 20 types were detected in these genomes,suggesting their immense biosynthetic potential to produce natural *** further constructed a genome-scale TimeTree of Colletotrichum and investigated the evolution of gene *** result suggested that gene gain and loss are both important for environmental adaption but less useful in delineating species *** study characterized

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The families Distoseptisporaceae ***.,Kirschsteiniotheliaceae,sporormiaceae and Torulaceae,with new species from freshwater in Yunnan Province,China

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Fungal Diversity 2016年第5期80卷 375-409页

作者： HongYan su Kevin D.Hyde saje.wa s.n.maharachchikumbura Hiran A.Ariyawansa ZongLong Luo Itthayakorn Promputtha Qing Tian ChuanGen Lin QiuJu shang YongChang Zhao HongMei Chai XiaoYing Liu Ali H.Bahkali Jayarama D.Bhat Eric H.C.McKenzie DeQun Zhou Faculty of Environmental sciences&Engineering Kunming University of Science&TechnologyKunming 650500YunnanChina College of Agriculture and Biology Dali UniversityDaliYunnan 671003China Center of Excellence in Fungal Research Mae Fah LuangUniversityChiang Rai 57100Thailand Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyangGuizhou 550006People’s Republic of China Department of Botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia school of science Mae Fah Luang UniversityChiang Rai 57100Thailand Departent of Biology Chiang Mai UniversityChiang MaiThailand Institute of Biotechnology and Germplasmic Resources Yunnan Academy of Agricultural SciencesKunming 650223People’s Republic of China College of Basic Medicine Dali UniversityDaliYunnan 671000China no.128/1-J Azad Housing SocietyCurcaP.OGoa Velha 403108India Department of Botany Goa UniversityGoa 403206India Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand

During a north–south latitudinal survey of aquatic fungi on submerged wood and herbaceous material in streams in the Asian region,we collected several hyphomycetous *** paper is part of a series where we provide illustrated accounts of these taxa and place them in a natural classification in the *** sequence based phylogenies in recent literature have shown that Dendryphion,sporidesmium and Torula-like species are polyphyletic in the phylum Ascomycota and their taxonomyhas been problematic due to a lack of understanding of the importance of morphological characters used to delimit taxa,as well as the lack of ex-type or reference *** on multi-locus phylogenies together with morphology,we propose the novel family Distoseptisporaceae(sordariomycetes)and three novel genera neotorula(Pleosporales,Dothideomycetes),Distoseptispora(sordariomycetes)and Pseudosporidesmium(sordariomycetes).In addition,Dendryphion aquaticum,***,Distoseptispora fluminicola,***,Kirschsteiniothelia submersa,neotorula aquatica,sporidesmium aquaticum,*** and *** are introduced as new *** knawiae *** proposed to accommodate sporidesmium knawiae in *** polyphyletic nature of Dendryphion,sporidesmium and Torula-like species are partially resolved,but further sampling with fresh collections and molecular data of species are needed to obtain a natural classification.

关键词： Asexual fungi Dothideomycetes Freshwater fungi Hyphomycetes new species Phylogeny sordariomycetes

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Integrative approaches for species delimitation in Ascomycota

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Fungal Diversity 2021年第4期109卷 155-179页

作者： saje.wa s.n.maharachchikumbura Yanpeng Chen Hiran A.Ariyawansa Kevin D.Hyde Danny Haelewaters Rekhani H.Perera Milan C.samarakoon Dhanushka n.wanasinghe Danilo E.Bustamante Jian-Kui Liu Daniel P.Lawrence Ratchadawan Cheewangkoon Marc stadler school of Life science and Technology University of Electronic Science and Technology of ChinaChengdu 611731People’s Republic of China Entomology and Plant Pathology Department Faculty of AgricultureChiang Mai UniversityChiang MaiThailand Department of Plant Pathology and Microbiology College of Bio-Resources and AgricultureNational Taiwan UniversityTaipei City 10617Taiwan Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Research Group Mycology Department of BiologyGhent University9000 GhentBelgium Faculty of science University of South Bohemia37005 Ceske BudejoviceCzech Republic Center for Mountain Futures Kunming Institute of BotanyHonghe County 654400YunnanPeople’s Republic of China Instituto de Investigación Para el Desarrollo sustentable de Ceja de selva(InDEs-CEs) Universidad Nacional Toribio Rodríguez de MendozaChachapoyasAmazonasPeru Department of Civil and Environmental Engineering(FICIAM) Universidad Nacional Toribio Rodríguez de MendozaChachapoyasAmazonasPeru Department of Plant Pathology University of CaliforniaDavisDavisCAUSA Helmholtz Centre for Infection Research GmbH Department Microbial Drugs and German Centre for Infection Research(DZIF)Partner Site Hannover-Braunschweig38124 BraunschweigGermany Institute of Microbiology Technische Universität BraunschweigInhoffenstraße 738124 BraunschweigGermany

Biodiversity loss from disturbances caused by human activities means that species are disappearing at an ever increasing *** high number of species that have yet to be described have generated extreme crisis to the ***,more than in any other era,effective ways to discover and delimitate species are *** paper reviews the historically fore-most approaches used to delimit species in Ascomycota,the most speciose phylum of *** include morphological,biological,and phylogenetic species *** argue that a single property to delineate species boundaries has various defects and each species concept comes with its own advantages and *** the rate of species discovery has increased because of the advancement of phylogenetic ***,traditional phylogenetic methods with few gene regions lack species-level resolution,and do not allow unambiguous *** detail the processes that affect gene tree heterogeneity,which acts as barriers to delimiting species boundaries in classical low-rank *** far,limited insights were given to the DnA-based methodologies to establish well-supported boundaries among fungal *** addition to reviewing concepts and methodologies used to delimit species,we present a case *** applied differ-ent species delimitation methods to understand species boundaries in the plant pathogenic and cryptic genus Phyllosticta(Dothideomycetes,Botryosphaeriales).several DnA-based methods over-split the taxa while in some methods several taxa fall into a single *** problems can be resolved by using multiple loci and coalescence-based ***,we discuss integrative approaches that are crucial for understanding species boundaries within Ascomycota and provide several examples for ideal and pragmatic approaches of species delimitation.

关键词： Ascomycetes Phylogenetics species concept systematics

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