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Pan-cancer analysis of RNA 5-methylcytosine reader (ALYREF)

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Oncology Research 2024年第3期32卷 503-515页

作者： XING YE ZHOUTING TUO KAI CHEN RUICHENG WU JIE WANG QINGXIN YU LUXIA YE AKIRA MIYAMOTO koo HAN YOO CHI ZHANG WURAN WEI DENGXIONG LI DECHAO FENG Samuel Oschin Comprehensive Cancer Institute Department of MedicineDepartment of Biomedical SciencesCedars-Sinai Medical CenterLos AngelesCA90048USA Department of Urology The Second Afiliated Hospital of Anhui Medical UniversityHefei230601China Department of Urology Institute of UrologyWest China HospitalSichuan UniversityChengdu610041China Department of Pathology Ningbo Diagnostic Pathology Center Ningbo315021China Department of Public Research Platfom Taizhou Hospital of Zhejiang Province Afliated to Wenzhou Medical UniversityLinhai317000China Department of Rehabilitation West Kyushu UniversityKanzaki shi842-8585Japan Department of Urology Kyung Hee UniversitySeoul446701South Korea Department of Rehabilitation The Afliated Hospital of Southwest Medical UniversityLuwzhou646000China

The incre asing interest in RNA modifications has signifcantly advanced epigenomic and epitranscriptomic *** study focuses on the immuno oncological impact of ALYREF in human cancer through a pan-cancer analysis,enhancing understanding of this gene's role in *** observed differential ALYREF expression between tumor and normal samples,correl ating strongly with prognosis in various cancers,particularly kidney renal papillary cell carcinoma(KIRP)and liver hepatocellular carcinoma(LIHC).ALYREF showed a negative correlation with most tumor-infitrating cells in lung squamous cell carcinoma(LUSC)and lymphoid neoplasm difuse large b-cell lymphoma(DLbC),while positive correlations were noted in IIHC,kidney chromophobe(KICH),mesothelioma(MESO),KIRP,pheochromocytoma and paraganglioma(PARD),and glioma(GbMLGG).Aditionally,ALYREF expression was closely associated with tumor heterogeneity,stemness indices,and a high mutation rate in TP53 across these *** conclusion,ALYREF may serve as an oncogenic biomarker in numerous cancers,meriting further research attention.

关键词： Pan-cancer RNA 5-methylcytosine ALYREF Immwno-oncological efects

Influence of rare earth on the microstructure and age hardening response of indirect-extruded Mg-5Sn-4Zn alloy

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Journal of Rare Earths 2010年第5期28卷 785-789页

作者：程伟丽 PARK S S 唐伟能 koo b H School of Nano & Advanced Materials Engineering Changwon National University Light Metals Research Group Korea Institute of Materials Science (KIMS)

The effects of Ce addition on the microstructure, age hardening response and mechanical properties of an indirect-extruded Mg-5wt.%Sn-4Zn (TZ54) alloy were investigated. Addition of Ce accelerated the aging response with the peak aging time moving from 300 h in TZ54 to 30 h in Mg-5wt.%Sn-4Zn-1Ce (TZE541), while the peak harness was similar to each other. The addition of Ce also caused an increase in the precipitation stability during overageing. Though the tensile strength of extruded TZ54 was improved by t...

关键词： magnesium alloy extrusion microstructure aging response rare earths

Influence of alloying elements on microstructure and microhardness of Mg-Sn-Zn-based alloys

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Transactions of Nonferrous Metals Society of China 2010年第12期20卷 2246-2252页

作者： W. L. CHENG S. PARK W. N. TANG b. S. YOU b. H. koo School of Nano ＆ Advanced Materials Engineering Changwon National University Changwon 641-773 South Korea Light Metals Research Group Korea Institute of Materials Science （KIMS） Changwon 641-831 South Korea

The phase evolution in （88%-91%）Mg-8%Sn-l%Zn-X （X=A1, Mn and/or Ce） system was analyzed via CALPHAD method and simulations were used in precise selection of the chemical composition. The influence of the addition of different alloying elements such as A1, Mn and Ce on the microstructure and microhardness of Mg-8%Sn-l%Zn-based alloys was investigated. Combined addition of A1 and Mn shows features distinct from separate addition of A1 or Mn. Additions of l%AI and l%Mn to base alloy result in the formation of massive A1-Mn phase in a-Mg matrix grains. Addition of Ce element can refme the second eutectic precipitates and form intermetallic compounds with Sn. Fine rod-like Sn-Ce phase presents mainly on the grain boundaries and plays a role in inhibiting grain growth. The effects of alloying elements on Vickers microhardness and indentation size effect of base alloy were examined.

关键词： magnesium alloys alloying elements CALPHAD method hardness indentation size effect

Effects of Supercritical Environment on Hydrocarbon-fuel Injection

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Journal of Thermal Science 2017年第2期26卷 183-191页

作者： bongchul Shin Dohun Kim Min Son Jaye koo Graduate School Korea Aerospace UniversityGoyangRepublic of Korea School of Aerospace and Mechanical Engineering Korea Aerospace UniversityGoyangRepublic of Korea

In this study, the effects of environment conditions on decane were investigated. Decane was injected in subcritical and supercritical ambient conditions. The visualization chamber was pressurized to 1.68 MPa by using nitrogen gas at a temperature of 653 K for subcritical ambient conditions. For supercritical ambient conditions, the visualization chamber was pressurized to 2.52 MPa by using helium at a temperature of 653 K. The decane injection in the pressurized chamber was visualized via a shadowgraph technique and gradient images were obtained by a post processing method. A large variation in density gradient was observed at jet interface in the case of subcritical injection in subcritical ambient conditions. Conversely, for supercritical injection in supercritical ambient conditions, a small density gradient was observed at the jet interface. In a manner similar to that observed in other cases, supercritical injection in subcritical ambient conditions differed from supercritical ambient conditions such as sphere shape liquid. Additionally, there were changes in the interface, and the supercritical injection core width was thicker than that in the subcritical injection. Furthermore, in cases with the same injection conditions, the change in the supercritical ambient normalized core width was smaller than the change in the subcritical ambient normalized core width owing to high specific heat at the supercritical injection and small phase change at the interface. Therefore, the interface was affected by the changing ambient condition. Given that the effect of changing the thermodynamic properties of propellants could be essential for a variable thrust rocket engine, the effects of the ambient conditions were investigated experimentally.

关键词： Decane Jet Subcritical Supercritical Visualization

Mitochondrial H_(2)S_(n)-Mediated Anti-Inflammatory Theranostics

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Nano-Micro Letters 2021年第12期13卷 1-13页

作者： Won Young Kim Miae Won Seyoung koo Xingcai Zhang Jong Seung Kim Department of Chemistry Korea UniversitySeoul 02841Korea John A.Paulson School of Engineering and Applied Sciences Harvard UniversityCambridgeMA 02138USA School of Engineering Massachusetts Institute of TechnologyCambridgeMA 02139USA

The insistent demand for space-controllable delivery,which reduces the side effects of non-steroidal antiinflammatory drugs(NSAIDs),has led to the development of a new theranostics-based approach for anti-inflammatory *** current anti-inflammatory treatments can be improved by designing a drug delivery system responsive to the inflammatory site biomarker,hydrogen polysulfide(H_(2)S_(n)).Here,we report a noveltheranostic agent 1(TA1),consisting of three parts:H_(2)S_(n)-mediated triggering part,a two-photon fluorophore bearing mitochondria targeting unit(Rhodol-TPP),and anti-inflammatory COX inhibitor(indomethacin).In vitro experiments showed that TA1 selectively reacts with H_(2)S_(n)to concomitantly release both Rhodol-TPP and ***-microscopy imaging of inflammation-inducedlive cells suggested that TA1 is localized in the mitochondria where the H_(2)S_(n)is *** TA1 reacted with H_(2)S_(n)in the endogenous and exogenous H_(2)S_(n)environments and in lipopolysaccharide treated inflammatory ***,TA1 suppressed COX-2 level in the inflammatory-induced cells and prostaglandin E 2(PGE2)level in blood serum from inflammation-induced mouse *** vivo experiments with inflammation-induced mouse models suggested that TA1 exhibits inflammation-site-elective drug release followed by significant therapeutic e ects,showing its function as a theranostic agent,capable of both anti-inflammatory therapy and precise *** behavior of TA1 is highly applicable in vivo model therapeutics for the inflammatory disease.

关键词： Theranostics Anti-inflammation Mitochondria Hydrogen polysulfides

Korean red ginseng promotes hippocampal neurogenesis in mice

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Neural Regeneration Research 2020年第5期15卷 887-893页

作者： Sun Ryu Hyongjun Jeon Hee-Young Kim Sungtae koo Seungtae Kim Korean Medicine Research Center for Healthy Aging Pusan National University49 Busandaehak-roMulgeum-eupYangsan-siGyeongsangnam-do 50612Republic of Korea Department of Korean Medical Science School of Korean MedicinePusan National University49 Busandaehak-roMulgeum-eupYangsan-siGyeongsangnam-do 50612Republic of Korea

Neurogenesis in the adult hippocampus plays a major role in cognitive ability of animals including learning and *** red ginseng (KRG) has long been known as a medicinal herb with the potential to improve learning and memory;however,the mechanisms are still ***,we evaluated whether KRG can promote cognitive function and enhance neurogenesis in the ***-week-old male C57bL/6 mice received 50 mg/kg of 5-bromo-2′-deoxyuridine (brdU) intraperitoneally and 100 mg/kg of KRG or vehicle orally once a day for 14 ***,Rotarod and Morris water maze tests were performed and the brains were collected after the last behavioral *** in the numbers of brdU- and brdU/ doublecortin (DCX;a marker for neuronal precursor cells and immature neurons)-positive cells in the dentate gyrus and the gene expression of proliferating cell nuclear antigen (a marker for cell differentiation),cerebral dopamine neurotrophic factor and ciliary neurotrophic factor in the hippocampus were then ***-treated mice came down the pole significantly faster and stood on the rotarod longer than vehicle-treated *** Morris water maze test showed that KRG administration enhanced the learning and memory abilities *** also significantly increased brdU- and brdU/DCX-positive cells in the dentate gyrus as well as the proliferating cell nuclear antigen,cerebral dopamine neurotrophic factor and ciliary neurotrophic factor mRNA expression levels in the hippocampus compared to *** of KRG promotes learning and memory abilities,possibly by enhancing hippocampal *** study was approved by the Pusan National University Institutional Animal Care and Use Committee (approval ***-2016-1071) on January 19,2016.

关键词： bromodeoxyuridine cerebral dopamine neurotrophic factor ciliary neurotrophic factor doublecortin ginseng hippocampus Korean red ginseng learning memory neurogenesis proliferating cell nuclear antigen red ginseng

Influence of Ti^(4+) doping on hyperfine field parameters of Mg_(0.95)Mn_(0.05)Fe_(2-2x)Ti_(2x)O_4(0≤x≤0.7)

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Journal of Central South University 2010年第6期17卷 1139-1143页

作者： KUMAR S PRAKASH R ALIMUDDIN CHOI H K koo b H SONG J I CHUNG H JEONG H LEE C G School of Nano and Advanced Materials Engineering Changwon National UniversityChangwon 641773Korea Department of Mechanical Engineering Changwon National UniversityChangwon 641773Korea Department of Applied Physics Aligarh Muslim UniversityAligarh 202002India Department of Precision & Mechanical Engineering and bK21 Eco-Friendly Heat & Cooling Energy Mechanical Research Team Gyeongsang National U niversityTongyeong 650160Korea

The mixed spinel ferrite system Mg0.95Mn0.05Fe2-2xTizxO4 （0 ≤x ≤ 0.7） was synthesized by the conventional solid-state reaction technique. The effect of Ti^4＋ doping was studied by using the Moessbauer spectroscopy measurements at room temperature. From the analysis of the Moessbauer spectra, it is observed that s-electron density, electric field gradient （EFG）, quadrupole coupling constant （QCC） and the net hyperfine magnetic fields acting on the Moessbauer nuclei-FeA^3＋ and Feb^3＋ change with the increase of Ti^4＋ doping in Mg0.95Mn0.05Fe2O4. The hyperfine magnetic field decreases with the increase of Ti^4＋ doping.

关键词： spinel ferrite Moessbauer spectroscopy hyperfine magnetic field isomer shift Ti^4+ doping

Mssbauer spectra of MnFe_(2-2x)Al_(2x)O_4(0≤x≤0.4) ferrites

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Journal of Central South University 2010年第6期17卷 1129-1132页

作者： bATOO K M KUMAR S PRAKASH R ALIMUDDIN SONG J I CHUNG H JEONG H koo b H LEE C G King Abdullah Institute for Nanotechnology King Saud UniversityRiyadh 11451Saudi Arabia School of Nano and Advanced Materials Engineering Changwon National UniversityChangwon 641773Korea Department of Mechanical Engineering Changwon National UniversityChangwon 641773Korea Department of Applied Physics Aligarh Muslim UniversityAligarh 202002India Department of Precision & Mechanical Engineering and bK21 Eco-Friendly Heat & Cooling Energy Mechanical Research Team Gyeongsang National U niversityTongyeong 650160Korea

The effect of non-magnetic Al^3＋ ion doping on the magnetic properties of MnFe2-2x Al2xO4 （0 ≤x≤ 0.4） spinel ferrites was studied using Moessbauer spectroscopy measurements at room temperature. From the Moessbauer study, it is observed that the ：esolved hyperfine sextets are due to the distribution of Fe ions on the two sublattices of the spinel ferrites. The value of the isomer shift obtained from the fitting of the Moessbauer spectra indicates that Fe ions are in ＋3 state. A paramagnetic doublet is observed at ：iegree of inversion x=0.4, superimposed on the hyperfine sextets, indicating that the super-exchange interaction A-b decreases due to ：he dilution of sublattice by Al^3＋ ions. The hyperfine magnetic field decreases at both interstitial sites of tetrahedral （A） and 3ctahedral （b） with the increase in Al concentration.

关键词： ferrites hyperfine interactions Moessbauer spectroscopy isomer shift

Impedance spectroscopy study on Mn_(1+x)Fe_(2-2x)Ti_xO_4(0≤x≤0.5) ferrites

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Journal of Central South University 2010年第6期17卷 1133-1138页

作者： KUMAR S bATOO K M PRAKASH R CHOI H K koo b H SONG J I CHUNG H JEONG H LEE C G School of Nano and Advanced Materials Engineering Changwon National UniversityChangwon 641773Korea King Abdullah Institute for Nanotechnology King Saud UniversityRiyadh 11451Saudi Arabia Department of Mechanical Engineering Changwon National UniversityChangwon 641773Korea Department of Precision & Mechanical Engineering and bK21 Eco-Friendly Heat & Cold Energy Mechanical Research Team Gyeongsang National U niversityTongyeong 650160Korea

The complex impedance spectroscopy and surface morphology of Mn1+xFe2-2xTixO4(0≤x≤0.5) system,prepared using a conventional solid state reaction technique,were *** impedance spectroscopy measurements were carried out at room temperature in the frequency range of 42-5 *** electrical processes in the samples were modeled in the form of an equivalent circuit made up of a combination of two parallel RC circuits attributed to grain and grain *** DC conductivity obtained by extrapolation of AC data using impedance spectroscopy and four-probe method increases at 10% doping of Ti *** energy-dispersive X-ray(EDX) pattern confirmed the homogeneous mixing of the Mn,Fe,Ti and O atoms in pure and doped ferrite samples.

关键词： spinel ferrite magnetic properties impedance spectroscopy Ti4+ ions doping