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Taxonomy,phylogeny and evolution of freshwater hypocreomycetidae(Sordariomycetes)

Fungal Diversity 2023年第4期121卷 1-94页

作者： Dan‑Feng Bao Kevin D.hyde Sajeewa S.N.Maharachchikumbura rekhani h.perera Vinodhini Thiyagaraja Sinang hongsanan Dhanushka N.Wanasinghe hong‑Wei Shen Xing‑Guo Tian Li‑Quan Yang Sarunya Nalumpang Zong‑Long Luo College of Agriculture and Biological Science Dali UniversityDali 671003YunnanPeople’s Republic of China Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Department of Entomology and Plant Pathology Faculty of AgricultureChiang Mai UniversityChiang Mai 50200Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Mushroom Research Foundation 128 M.3 Ban Pa Deng T.Pa PaeA.Mae TaengChiang Mai 50150Thailand Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Innovative Institute for Plant health Zhongkai University of Agriculture and EngineeringHaizhu DistrictGuangzhou 510225GuangdongPeople’s Republic of China School of Life Science and Technology University of Electronic Science and Technology of ChinaChengdu 611731SichuanPeople’s Republic of China Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouPeople’s Republic of China College of Life Sciences and Oceanography Shenzhen Key Laboratory of Microbial Genetic EngineeringShenzhen UniversityShenzhen 518060China Research Center of Microbial Diversity and Sustainable Utilization Faculty of SciencesChiang Mai UniversityChiang Mai 50200Thailand honghe Center for Mountain Futures Kunming Institute of BotanyChinese Academy of SciencesHonghe 654400YunnanPeople’s Republic of China Center for Yunnan Plateau Biological Resources Protection and Utilization Yunnan Engineering Research Center of Fruit WineCollege of Biological Resource and Food EngineeringQujing Normal UniversityQujing 655011YunnanPeople’s Republic of China School of Food and Pharmaceutical Engineering Guizhou Institute of TechnologyGuiyang 550003Gui ZhouPeople’s Republic of China

hypocreomycetidae is a highly diverse group with species from various habitats. This subclass has been reported as pathogenic,endophytic, parasitic, saprobic, fungicolous, lichenicolous, algicolous, coprophilous and insect fungi from aquatic andterrestrial habitats. In this study, we focused on freshwater fungi of hypocreomycetidae which resulted 41 fresh collectionsfrom China and Thailand. Based on morphological and phylogenetic analyses, we identified 26 species that belong to twoorders (hypocreales and Microascales) and six families (Bionectriaceae, halosphaeriaceae, Microascaceae, Nectriaceae,Sarocladiaceae and Stachybotryaceae). Ten new species are introduced and 13 new habitats and geographic records arereported. Mariannaea superimposita, Stachybotrys chartarum and S. chlorohalonatus are recollected from freshwater habitatsin China. Based on phylogenetic analysis of combined LSU, ITS, SSU, rpb2 and tef1-α sequences data, Emericellopsisis transferred to hypocreales genera incertae sedis;Pseudoacremonium is transferred to Bionectriaceae;Sedecimiella isplaced in Nectriaceae;Nautosphaeria and Tubakiella are excluded from halosphaeriaceae and placed in Microascalesgenera incertae sedis;and Faurelina is excluded from hypocreomycetidae. Varicosporella is placed under Atractium as asynonym of Atractium. In addition, phylogenetic analysis and divergence time estimates showed that Ascocodina, Campylospora,Cornuvesica and Xenodactylariaceae form distinct lineages in hypocreomycetidae and they evolved in the family/order time frame. hence, a new order (Xenodactylariales) and three new families (Ascocodinaceae, Campylosporaceae andCornuvesicaceae) are introduced based on phylogenetic analysis, divergence time estimations and morphological characters.Ancestral character state analysis is performed for different habitats of hypocreomycetidae including freshwater, marineand terrestrial taxa. The result indicates that marine and freshwater fungi evolved independently from terrestrial ancestors.The results further support th

关键词： Ancestral character analysis Divergence time estimates Molecular clock analysis Morphology Phylogeny Freshwater fungi

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Taxonomic circumscription of Diaporthales based on multigene phylogeny and morphology

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Fungal Diversity 2018年第6期93卷 241-443页

作者： Indunil C.Senanayake Rajesh Jeewon Putarak Chomnunti Dhanushka N.Wanasinghe Chada Norphanphoun Anuruddha Karunarathna Dhandevi Pem rekhani h.perera Erio Camporesi Eric h.C.McKenzie Kevin D.hyde Samantha C.Karunarathna Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanChina World Agroforestry Centre East and Central AsiaKunming 650201YunnanChina Centre of Excellence for Fungal Research Mae Fah Luang UniversityChiang RaiThailand Department of health Sciences Faculty of ScienceUniversity of MauritiusReduit 80837Mauritius Department of Entomology and Plant Pathology Faculty of AgricultureChiang Mai UniversityChiang Mai 50200Thailand A.M.B.Gruppo Micologico Forlivese Antonio CicognaniVia Roma 18Forlı`Italy A.M.B.Circolo Micologico Giovanni Carini314 BresciaItaly Societa`per gliStudiNaturalisticidella Romagna 144 BagnacavalloRAItaly Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand

Demarcation of family,genus and species boundaries in the Diaporthales has been tentative due to uninformative illus-trations and descriptions,overlapping morphological characteristics,misplacement or poor condition of type specimens and shortage of molecular data from ex-type cultures.In this study,we obtained the type specimens or other authentic specimens of diaporthalean taxa from worldwide fungaria.We examined,described and illustrated them.This study is based on morphological characters from type or authentic specimens,details from protologue and original illustrations and molecular data obtained from GenBank.Combined analyses of nrITS,nrLSU,RPB2 and TEF1-a sequence data were used to construct the molecular phylogeny.Additionally,we provided separate phylogenetic trees for families when necessary to show the generic distribution within these families based on suitable gene markers.Based on morphology and phylogeny,we treat 17 genera previously assigned to Diaporthales genera incertae sedis within several families.For some genera we have designated new generic types as they are lacking type species or type species have affiliations with other families.We exclude Anisomycopsis from Diaporthales and place it in Xylariomycetidae genera incertae sedis.Tirisporellaceae,which was previously placed in Tirisporellales is placed in Diaporthales based on phylogeny and morphology.A new combi-nation,Dendrostoma leiphaemia propose for Amphiporthe leiphaemia(Fr.)Butin.Based on the morphological characters and molecular data we accept 27 families and 138 genera within Diaporthales,24 genera in Diaporthales genera incertae sedis and one genus in Xylariomycetidae genera incertae sedis.We provide notes for genera in Diaporthales genera incertae sedis,and excluded and doubtful genera are listed with notes on their taxonomy and phylogeny.

关键词： Authentic specimens Dendrostoma leiphaemia Incertae sedis Classification Taxonomy Families Accepted genera

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Thailand’s amazing diversity:up to 96%of fungi in northern Thailand may be novel

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Fungal Diversity 2018年第6期93卷 215-239页

作者： Kevin D.hyde Chada Norphanphoun Jie Chen Asha J.Dissanayake Mingkwan Doilom Sinang hongsanan Ruvishika S.Jayawardena Rajesh Jeewon rekhani h.perera Benjarong Thongbai Dhanushka N.Wanasinghe Komsit Wisitrassameewong Saowaluck Tibpromma Marc Stadler Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Instituto de Ecologı́a A.C.CP 91070 XalapaVeracruzMexico World Agro Forestry Centre East and Central Asia132 Lanhei RoadKunming 650201YunnanPeople’s Republic of China Department of Biology Faculty of ScienceChiang Mai UniversityChiang Rai 50200Thailand Shenzhen Key Laboratory of Microbial Genetic Engineering College of Life Sciences and OceanographyShenzhen UniversityShenzhenPeople’s Republic of China Shenzhen Key Laboratory of Laser Engineering College of Optoelectronic EngineeringShenzhen UniversityShenzhenPeople’s Republic of China Department of health Sciences Faculty of ScienceUniversity of MauritiusReduit 80837Mauritius National Science Technology and Innovation Policy Office Bangkok 10330Thailand Department of Microbial Drugs and German Centre for Infection Research(DZIF) partner site Hannover-BraunschweigHelmholtz Centre for Infection ResearchInhoffenstrasse 738124 BrunswickGermany

Fungi have been often neglected,despite the fact that they provided penicillin,lovastatin and many other important medicines.They are an understudied,but essential,fascinating and biotechnologically useful group of organisms.The study of fungi in northern Thailand has been carried out by us since 2005.These studies have been diverse,ranging from ecological aspects,phylogenetics with the incorportation of molecular dating,taxonomy(including morphology and chemotaxonomy)among a myriad of microfungi,to growing novel mushrooms,and DNA-based identification of plant pathogens.In this paper,advances in understanding the biodiversity of fungi in the region are discussed and compared with those further afield.Many new species have been inventoried for the region,but many unknown species remain to be described and/or catalogued.For example,in the edible genus Agaricus,over 35 new species have been introduced from northern Thailand,and numerous other taxa await description.In this relatively well known genus,93%of species novelty is apparent.In the microfungi,which are relatively poorly studied,the percentage of novel species is,surprisingly,generally not as high(55–96%).As well as Thai fungi,fungi on several hosts from Europe have been also investigated.Even with the well studied European microfungi an astounding percentage of new taxa(32–76%)have been discovered.The work is just a beginning and it will be a daunting task to document this astonishingly high apparent novelty among fungi.

关键词： Agaricus Amanita Colletotrichum Cornus Fungal diversity Pandanaceae Rosaceae Rosa Teak fungi

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Integrative approaches for species delimitation in Ascomycota

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Fungal Diversity 2021年第4期109卷 155-179页

作者： Sajeewa S.N.Maharachchikumbura Yanpeng Chen hiran A.Ariyawansa Kevin D.hyde Danny haelewaters rekhani h.perera Milan C.Samarakoon Dhanushka N.Wanasinghe Danilo E.Bustamante Jian-Kui Liu Daniel P.Lawrence Ratchadawan Cheewangkoon Marc Stadler School of Life Science and Technology University of Electronic Science and Technology of ChinaChengdu 611731People’s Republic of China Entomology and Plant Pathology Department Faculty of AgricultureChiang Mai UniversityChiang MaiThailand Department of Plant Pathology and Microbiology College of Bio-Resources and AgricultureNational Taiwan UniversityTaipei City 10617Taiwan Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Research Group Mycology Department of BiologyGhent University9000 GhentBelgium Faculty of Science University of South Bohemia37005 Ceske BudejoviceCzech Republic Center for Mountain Futures Kunming Institute of BotanyHonghe County 654400YunnanPeople’s Republic of China Instituto de Investigación Para el Desarrollo Sustentable de Ceja de Selva(INDES-CES) Universidad Nacional Toribio Rodríguez de MendozaChachapoyasAmazonasPeru Department of Civil and Environmental Engineering(FICIAM) Universidad Nacional Toribio Rodríguez de MendozaChachapoyasAmazonasPeru Department of Plant Pathology University of CaliforniaDavisDavisCAUSA helmholtz Centre for Infection Research Gmbh Department Microbial Drugs and German Centre for Infection Research(DZIF)Partner Site Hannover-Braunschweig38124 BraunschweigGermany Institute of Microbiology Technische Universität BraunschweigInhoffenstraße 738124 BraunschweigGermany

Biodiversity loss from disturbances caused by human activities means that species are disappearing at an ever increasing rate.The high number of species that have yet to be described have generated extreme crisis to the taxonomist.Therefore,more than in any other era,effective ways to discover and delimitate species are needed.This paper reviews the historically fore-most approaches used to delimit species in Ascomycota,the most speciose phylum of Fungi.These include morphological,biological,and phylogenetic species concepts.We argue that a single property to delineate species boundaries has various defects and each species concept comes with its own advantages and disadvantages.Recently the rate of species discovery has increased because of the advancement of phylogenetic approaches.however,traditional phylogenetic methods with few gene regions lack species-level resolution,and do not allow unambiguous conclusions.We detail the processes that affect gene tree heterogeneity,which acts as barriers to delimiting species boundaries in classical low-rank phylogenies.So far,limited insights were given to the DNA-based methodologies to establish well-supported boundaries among fungal species.In addition to reviewing concepts and methodologies used to delimit species,we present a case study.We applied differ-ent species delimitation methods to understand species boundaries in the plant pathogenic and cryptic genus Phyllosticta(Dothideomycetes,Botryosphaeriales).Several DNA-based methods over-split the taxa while in some methods several taxa fall into a single species.These problems can be resolved by using multiple loci and coalescence-based methods.Further,we discuss integrative approaches that are crucial for understanding species boundaries within Ascomycota and provide several examples for ideal and pragmatic approaches of species delimitation.

关键词： Ascomycetes Phylogenetics Species concept Systematics

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Revision and phylogeny of Leptosphaeriaceae

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Fungal Diversity 2015年第5期74卷 19-51页

作者： hiran A.Ariyawansa Chayanard Phukhamsakda Kasun M.Thambugala Timur S.Bulgakov Dhanushka N.Wanasinghe rekhani h.perera Ausana Mapook Erio Camporesi Ji-Chuan Kang E.B.Gareth Jones Ali h.Bahkali Subashini C.Jayasiri Kevin D.hyde Zuo-Yi Liu J.D.Bhat Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyangGuizhou 550006People’s Republic of China Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201People’s Republic of China World Agroforestry Centre East Asia and CentralHeilongtanKunming 650201People’s Republic of China The Engineering and Research Center for Southwest Bio-Pharmaceutical Resources of National Education Ministry of China Guizhou UniversityGuiyang 550025Guizhou ProvincePeople’s Republic of China School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand A.M.B.Gruppo Micologico Forlivese BAntonio Cicognani Via Roma 18ForlìItaly Department of Botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia Academy of Biology and Biotechnology(Department of Biological Sciences) Southern Federal UniversityRostov-on-Don 344090Russia

Leptosphaeriaceae is a family in the order Pleosporales comprising economically important plant pathogens.Species may also be endophytes or saprobes on various host plants.In recent classifications Alternariaster,Leptosphaeria,Neophaeosphaeria,Paraleptosphaeria,heterospora,Subplenodomus and Plenodomus were included in the family.The taxonomy of genera and species in Leptosphaeriaceae has been problematic due to the lack of understanding of the importance of morphological characters used to distinguish taxa,as well as the lack of reference strains.In order to establish evolutionary relationships and to provide a backbone tree for Leptosphaeria and allied genera,we sequenced the 18S nrDNA,28S nrDNA,ITS,RPB2,TEF and ACT gene regions of Leptosphaeriaceae species and analysed this data.Multi-locus phylogenies together with morphology robustly support the monophyletic nature of Leptosphaeriaceae among the other families in Pleosporales,and the inclusion of the genera Alternariaster,heterospora,Leptosphaeria,Paraleptosphaeria,Sphaerellopsis,Subplenodomus,Plenodomus and three novel genera Alloleptosphaeria,Neoleptosphaeria and Pseudoleptosphaeria.Five new species,Alternariaster centaureae-diffusae,Leptosphaeria cichorium,Paraleptosphaeria rubi,Plenodomus guttulatus and P.salviae are introduced.An account of sexual morph of Alternariaster centaureae-diffusae is provided,and the sexual morph of Leptosphaeria doliolum is re-described and illustrated using modern concepts from fresh collections.A novel family Neophaeosphaeriaceae is established to accommodate the genus Neophaeosphaeria and its species.

关键词： Dothideomycetes Leptosphaeria Paraleptosphaeria Plenodomus Plant pathogens Neophaeosphaeria

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Towards a natural classification and backbone tree for Sordariomycetes

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Fungal Diversity 2015年第3期72卷 199-301页

作者： Sajeewa S.N.Maharachchikumbura Kevin D.hyde EBGareth Jones Eric h.C.McKenzie Shi-Ke huang Mohamed A.Abdel-Wahab Dinushani A.Daranagama Monika Dayarathne Melvina J.D’souza Ishani D.Goonasekara Sinang hongsanan Ruvishika S.Jayawardena Paul M.Kirk Sirinapa Konta Jian-Kui Liu Zuo-Yi Liu Chada Norphanphoun Ka-Lai Pang rekhani h.perera Indunil C.Senanayake Qiuju Shang Belle Damodara Shenoy Yuanpin Xiao Ali h.Bahkali Jichuan Kang Sayanh Somrothipol Satinee Suetrong Tingchi Wen Jianchu Xu Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina Key Laboratory for Plant Biodiversity and Biogeography of East Asia(KLPB) Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanChina World Agroforestry Centre East and Central Asia132 Lanhei RoadKunming 650201China Institute of Excellence in Fungal Research and School of ScienceMae Fah Luang UniversityChiang Rai 57100Thailand Department of Botany and Microbiology College of ScienceKing Saud UniversityP.O.Box 2455Riyadh 11451Kingdom of Saudi Arabia Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand The Engineering and Research Center for Southwest Bio-Pharmaceutical Resources of National Education Ministry of China Guizhou UniversityGuiyang 550025Guizhou ProvincePeople’s Republic of China Department of Botany Faculty of ScienceSohag UniversitySohag 82524Egypt Institute of Marine Biology and Centre of Excellence for the Oceans Taiwan Ocean University2 Pei-Ning RoadKeelung 20224TaiwanRepublic of China Mycology Section Royal Botanic GardensKewLondonUK Microbe Interaction Laboratory(BMIT) National Center for Genetic Engineering and Biotechnology(BIOTEC)113 Thailand Science ParkPhahonyothin RoadKhlong NuengKhlong LuangPathum ThaniThailand Fungal Diversity Laboratory(BFBD) National Center for Genetic Engineering and Biotechnology(BIOTEC)113 Thailand Science ParkPhahonyothin RoadKhlong NuengKhlong LuangPathum ThaniThailand Biological Oceanography Division CSIR-National Institute of OceanographyDona PaulaGoa 403004India Institute of Plant and Environment Protection Beijing Academy of Agriculture and Forestry SciencesNo 9 of ShuGuangHuaYuanZhangLuHaidian DistrictBeijing 100097China

Sordariomycetes is one of the largest classes of Ascomycota and is characterised by perithecial ascomata and inoperculate unitunicate asci.The class includes many important plant pathogens,as well as endophytes,saprobes,epiphytes,and fungicolous,lichenized or lichenicolous taxa.The class includes freshwater,marine and terrestrial taxa and has a worldwide distribution.This paper provides an updated outline of the Sordariomycetes and a backbone tree incorporating asexual and sexual genera in the class.Based on phylogeny and morphology we introduced three subclasses;Diaporthomycetidae,Lulworthiomycetidae and Meliolomycetidae and five orders;Amplistromatales,Annulatascales,Falcocladiales,Jobellisiales and Togniniales.The outline is based on literature to the end of 2014 and the backbone tree published in this paper.Notes for 397 taxa with information,such as new family and genera novelties,novel molecular data published since the Outline of Ascomycota 2009,and new links between sexual and asexual genera and thus synonymies,are provided.The Sordariomycetes now comprises six subclasses,28 orders,90 families and 1344 genera.In addition a list of 829 genera with uncertain placement in Sordariomycetesis also provided.

关键词： Boliniales Calosphaeriales Chaetosphaeriales Coniochaetales Coronophorales Diaporthales Glomerellales hypocreomycetidae hypocreales Koralionastetales Lulworthiales Magnaporthales Melanosporales Meliolales Microascales Molecular identification Nomenclature Ophiostomatales Phyllachorales Sordariales Sordariomycetidae Taxonomy Trichosphaeriales Type species Xylariales Xylariomycetidae

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Book reviews

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Fungal Diversity 2016年第2期77卷 381-402页

作者： Dhanushka N.Wanasinghe Sutakorn Kamolhan Dinushani Anupama Daranagama W.K.M.C.Dayarathne Asha J.Dissanayake Ishani D.Goonasekara K.K.hapuarachchi Nimali Indiwaree de Silva hasini Ekanayaka Subashini C.Jayasiri Samantha C.Karunarathna rekhani h.perera Chayanard Phukhamsakda Indunil C.Senanayake Qiuju Shang Thilini K.Wickremasinghe Jing Yang YuanPin Xiao Center of Excellence in Fungal Research School of ScienceMae Fah Luang University333 Moo 1ThasudMuangChiang Rai 57100Thailand Department of Biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand

Rating system Exceptional/brilliant Excellent Good has merit Not worth reading Acanthamoeba:Biology and Pathogenesis(2nd edition)By Naveed Ahmed Khan The American Phytopathological Society hardcover;334 pages;including 88 figures and 26 tables;ISBN:978-1-908230-50-8(hardcover)ISBN:978-1-908230-51-5(eBook)Acanthamoeba is an opportunistic protist pathogen,causing a blinding keratitis and fatal granulomatous encephalitis.Thus Acanthamoeba has gained increasing attention during the last few decades from the scientific communities,with cellular microbiology,environmental biology,physiology,cellular interactions,molecular biology,biochemistry and the evolutionary studies.

关键词： tables gained brilliant

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Book reviews

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Fungal Diversity 2014年第6期69卷 147-170页

作者： Samantha C.Karunarathna Melvina D’souza Anupama Deranagama Leela Maya Rizal Paul G.Mungai Jingzu Sun K.W.Thilini Chethana Ishani D.Goonasekara Asha Janadaree Dissanayake W.M.D.N.Wanasinghe Kasun M.Thambugala Dimuthu S.Manamgoda huili Li Komsit Wisitrassameewong Saowaluck Tibpromma rekhani h.perera Sylas Lau Kevin D.hyde Mae Fah Luang University 333 Moo 1ThasudMuangChiang Rai 57100Thailand

Fungi,as all other organisms need energy for their development and metabolic processes.They are very sensitive to and competitive for environmental resources.They assess their surroundings,both below and above ground and estimate how much energy they need for particular tasks,then realize the optimum variant.They have the ability to control certain environmental resources.They perceive themselves and can distinguish between other organisms.They process and evaluate information from surroundings and then modify their behavior accordingly.

关键词： processes. organisms. competitive

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Families of Sordariomycetes

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Fungal Diversity 2016年第4期79卷 1-317页

作者： Sajeewa S.N.Maharachchikumbura Kevin D.hyde E.B.Gareth Jones E.h.C.McKenzie Jayarama D.Bhat Monika C.Dayarathne Shi-Ke huang Chada Norphanphoun Indunil C.Senanayake rekhani h.perera Qiu-Ju Shang Yuanpin Xiao Melvina J.D’souza Sinang hongsanan Ruvishika S.Jayawardena Dinushani A.Daranagama Sirinapa Konta Ishani D.Goonasekara Wen-Ying Zhuang Rajesh Jeewon Alan J.L.Phillips Mohamed A.Abdel-Wahab Abdullah M.Al-Sadi Ali h.Bahkali Saranyaphat Boonmee Nattawut Boonyuen Ratchadawan Cheewangkoon Asha J.Dissanayake Jichuan Kang Qi-Rui Li Jian Kui Liu Xing Zhong Liu Zuo-Yi Liu JJennifer Luangsa-ard Ka-Lai Pang Rungtiwa Phookamsak Itthayakorn Promputtha Satinee Suetrong Marc Stadler Tingchi Wen Nalin N.Wijayawardene Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouChina Center of Excellence in Fungal Research and School of ScienceMae Fah Luang UniversityChiang Rai 57100Thailand Department of Crop Sciences College of Agricultural and Marine SciencesSultan Qaboos UniversityP.O.Box 34Al-Khod 123Oman Department of Botany and Microbiology College of ScienceKing Saud UniversityP.O.Box 2455Riyadh 11451Kingdom of Saudi Arabia Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand No.128/1-J Azad Housing SocietyCurcaP.O.Goa Velha403108 GoaIndia Department of Botany Goa UniversityGoa 403206India Engineering Research Center of Southwest Bio-Pharmaceutical Resources Ministry of EducationGuizhou UniversityGuiyang 550025Guizhou ProvinceChina Institute of Plant and Environment Protection Beijing Academy of Agriculture and Forestry SciencesNo 9 of ShuGuangHuaYuanZhangLuHaidian District Beijing 100097China State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesBeijing 100101China Department of health Sciences Faculty of ScienceUniversity of MauritiusReduitMauritius Faculty of Sciences Biosystems and Integrative Sciences Institute(BioISI)University of LisbonCampo Grande1749-016 LisbonPortugal Department of Botany Faculty of ScienceSohag UniversitySohagEgypt Fungal Biodiversity Laboratory BIOTECNational Science and Technology Development Agency(NSTDA)113 Thailand Science ParkThanon PhahonyothinTombon Khlong NuengAmphoe Khlong LuangPathum Thani 12120Thailand Department of Plant Pathology Faculty of AgricultureChiang Mai UniversityChiang Mai 50200Thailand Department of Pharmacy Guiyang Medical UniversityGuiyangGuizhou 550025China Microbe Interaction Laboratory BIOTECNational Science and Technology Development Agency(NSTDA)113 Thailand Science ParkThanon PhahonyothinTombon Khlong NuengAmphoe Khlong LuangPathum Thani 12120Thailand Institute of Marine Biology and Center of Excell

Sordariomycetes is one of the largest classes of Ascomycota that comprises a highly diverse range of fungi characterized mainly by perithecial ascomata and inoperculate unitunicate asci.The class includes many important plant pathogens,as well as endophytes,saprobes,epiphytes,coprophilous and fungicolous,lichenized or lichenicolous taxa.They occur in terrestrial,freshwater and marine habitats worldwide.This paper reviews the 107 families of the class Sordariomycetes and provides a modified backbone tree based on phylogenetic analysis of four combined loci,with a maximum five representative taxa from each family,where available.This paper brings together for the first time,since Barrs’1990 Prodromus,descriptions,notes on the history,and plates or illustrations of type or representative taxa of each family,a list of accepted genera,including asexual genera and a key to these taxa of Sordariomycetes.Delineation of taxa is supported where possible by molecular data.The outline is based on literature to the end of 2015 and the Sordariomycetes now comprises six subclasses,32 orders,105 families and 1331 genera.The family Obryzaceae and Pleurotremataceae are excluded from the class.

关键词： Amplistromatales Annulatascales Boliniales Calosphaeriales Chaetosphaeriales Coniochaetales Conioscyphales Cordanales Coronophorales Diaporthales Falcocladiales Glomerellales hypocreales Jobellisiales Koralionastetales Lulworthiales Magnaporthales Melanosporales Meliolales Microascales Ophiostomatales Phylogeny Phyllachorales Pisorisporiales Pleurotheciales Sordariales Savoryellales Tirisporellales Togniniales Torpedosporales Trichosphaeriales Taxonomy Trichosphaeriales Type species Xylariales

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One stop shopⅢ:taxonomic update with molecular phylogeny for important phytopathogenic genera:51–75(2019)

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Fungal Diversity 2019年第5期 77-160页

作者： Ruvishika S.Jayawardena Kevin D.hyde Eric h.C.McKenzie Rajesh Jeewon Alan J.L.Phillips rekhani h.perera Nimali I.de Silva Sajeewa S.N.Maharachchikumburua Milan C.Samarakoon Anusha h.Ekanayake Danushka S.Tennakoon Asha J.Dissanayake Chada Norphanphoun Chuangen Lin Ishara S.Manawasinghe Qian Tian Rashika Brahmanage Putarak Chomnunti Sinang hongsanan Subashini C.Jayasiri F.halleen Chitrabhanu S.Bhunjun Anuruddha Karunarathna Yong Wang Department of Plant Pathology Agriculture CollegeGuizhou UniversityGuiyang 550025GuizhouChina Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang RaiThailand Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201People’s Republic of China Landcare Research-Manaaki Whenua Private Bag 92170AucklandNew Zealand Department of health Sciences Faculty of ScienceUniversity of MauritiusReduitMauritius Faculdade de Ciéncias Biosystems and Integrative Sciences Institute(BioISI)Universidade de LisboaCampo Grande1749-016 LisbonPortugal School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Department of Biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand School of Life Science and Technology University of Electronic Science and Technology of ChinaChengdu 611731People’s Republic of China Institute of Plant and Environment Protection Beijing Academy of Agriculture and Forestry SciencesNo.9 of ShuguanghuayuanzhongluHaidian DistrictBeijing 100097People’s Republic of China College of Life Science and Oceanography Shenzhen University1068Nanhai AvenueNanshanShenzhen 518055China Plant Protection Division ARC Infruitec-NietvoorbijPrivate Bag X5026Stellenbosch 7599South Africa Department of Plant Pathology University of StellenboschPrivate Bag X1Matieland 7602South Africa

This is a continuation of a series focused on providing a stable platform for the taxonomy of phytopathogenic fungi and organisms.This paper focuses on 25 phytopathogenic genera:Alternaria,Capnodium,Chaetothyrina,Cytospora,Cyphellophora,Cyttaria,Dactylonectria,Diplodia,Dothiorella,Entoleuca,Eutiarosporella,Fusarium,Ilyonectria,Lasiodiplodia,Macrophomina,Medeolaria,Neonectria,Neopestalotiopsis,Pestalotiopsis,Plasmopara,Pseudopestalotiopsis,Rosellinia,Sphaeropsis,Stagonosporopsis and Verticillium.Each genus is provided with a taxonomic background,distribution,hosts,disease symptoms,and updated backbone trees.A new database(Onestopshopfungi)is established to enhance the current understanding of plant pathogenic genera among plant pathologists.

关键词： Classification Database Plant pathology Phylogeny Taxonomy Symptoms Systematics

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