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Combined linkage and association mapping reveals two major QTL for stripe rust adult plant resistance in Shaanmai 155 and their haplotype variation in common wheat germplasm

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The Crop Journal 2022年第3期10卷 783-792页

作者： Cai’e Zhou Dan Liu Xu Zhang Qimeng Wu Shengjie Liu Qingdong Zeng Qilin Wang Changfa Wang Chunlian Li ravi psingh Sridhar Bhavani Zhensheng Kang Dejun Han Weijun Zheng Jianhui Wu State Key Laboratory of Crop Stress Biology for Arid Areas College of AgronomyNorthwest A&F UniversityYangling 712100ShaanxiChina State Key Laboratory of Crop Stress Biology for Arid Areas College of Plant ProtectionNorthwest A&F UniversityYangling 712100ShaanxiChina International Maize and Wheat Improvement Center(CIMMYT) El BatanTexcocoEstado de Mexico 56237Mexico

The development and deployment of diverse resistance sources in new wheat cultivars underpin the durable control of stripe *** the present study,two loci for adult plant resistance(APR),QYr SM155.1 and QYr SM155.2,were identified in the Chinese wheat breeding line Shaanmai *** SM155.1 was mapped to a 3.0-c M interval between the single-nucleotide polymorphism(SNP)markers AX-109583610 and AX-110907562 on chromosome arm 2 *** SM155.2 was mapped to a 2.1-c M interval flanked by the SNP markers AX-110378556 and AX-86173526 on chromosome arm 7 AS.A genome-wide association study was used to identify markers associated with APR in a panel of 411 spring wheat *** and 11 SNPs were significantly associated with QYr SM155.1 and QYr SM155.2,respectively,corresponding to physical intervals of 653.75–655.52 Mb on 2 BL and 81.63–83.93 Mb on7 *** characterize the haplotype variation and the distribution of these QTL,haplotype analysis was performed based on these SNPs in an independent panel of 1101 worldwide wheat *** major haplotypes(2 B_h1,2 B_h2,and 2 B_h3)for QYr SM155.1 and four major haplotypes(7 A_h1,7 A_h2,7 A_h3,and 7 A_h4)for QYr SM155.2 were *** individually harboring QYr SM155.1_h1 and QYr SM155.2_h1 haplotypes and their combination displayed *** assays of 1306 current Chinese cultivars and breeding lines using markers flanking QYr SM155.1 and QYr SM155.2 indicated that the resistance haplotypes of the two QTL were present in respectively 1.45%and 14.16%of *** resistance haplotype frequencies at these two loci using marker-assisted selection should benefit wheat production in China.

关键词： Linkage and association mapping Stripe rust resistance QYr SM155.1 QYr SM155.2 Haplotype variation

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Progress in breeding for resistance to Ug99 and other races of the stem rust fungus in CIMMYT wheat germplasm

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Frontiers of Agricultural Science and Engineering 2019年第3期6卷 210-224页

作者： Sridhar BHAVANI David PHODSON Julio HUERTA-ESPINO Mandeep SRANDHAWA ravi psingh International Maize and Wheat Improvement Center Texcoco56237Mexico Campo Experimental Valle de México INIFAP Chapingo56230Mexico International Maize and Wheat Improvement Center ICRAF CampusNairobi00100Kenya

Races belonging to the Ug99(TTKSK) lineage of the wheat stem rust fungus, carrying complex virulence combinations, and their migration to countries in Africa,Middle East and Asia continue to pose a significant threat to global wheat *** rapid spread of additional races, e.g., TKTTF or the Digalu lineage, in several countries causing localized epidemics reminds us of the vulnerability of wheat germplasm to stem rust disease, a formidable foe referenced as early as biblical times.A global rust monitoring system reflecting increased surveillance efforts has identified 13 races within the Ug99 lineage in 13 countries and unrelated lineages are emerging, spreading and posing serious threats to wheat *** TKTTF has caused localized epidemics in Ethiopia and its variants have been recently implicated in stem rust outbreaks in *** research efforts have resulted in the identification of several new resistance genes and gene combinations for use in *** multiple adult plant resistance(APR) genes in high-yielding backgrounds and discovery of new quantitative trait loci conferring stem rust resistance has progressed in the recent years, enhancing the durability of *** gene stewardship and new generation breeding materials and cultivars that combine multiple race-specific or minor to intermediate effect APR genes,complemented by active surveillance and monitoring, have helped to limit major epidemics and increase grain yield potential in key target environments.

关键词： adult plant resistance black rust race-specific resistance Triticum aestivum

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