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Identification of QTL and underlying genes for root system architecture associated with nitrate nutrition in hexaploid wheat

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Journal of Integrative Agriculture 2022年第4期21卷 917-932页

作者： Marcus GRIFFITHS Jonathan A.ATKINSON Laura-Jayne GARDINER ranjan swarup Michael P.POUND Michael H.WILSON Malcolm J.BENNETT Darren M.WELLS School of Biosciences University of NottinghamSutton Bonington CampusLE125RDUK Future Food Beacon of Excellence University of NottinghamSutton Bonington CampusLE125RDUK Integrative Phenomics Group School of BiosciencesUniversity of NottinghamSutton Bonington CampusLE125RDUK IBM Research The Hartree CentreWarringtonWA44ADUK School of Computer Science University of NottinghamNottinghamNG81BBUK

The root system architecture(RSA) of a crop has a profound effect on the uptake of nutrients and consequently the potential yield. However, little is known about the genetic basis of RSA and resource adaptive responses in wheat(Triticum aestivum L.). Here, a high-throughput germination paper-based plant phenotyping system was used to identify seedling traits in a wheat doubled haploid mapping population, Savannah×Rialto. Significant genotypic and nitrate-N treatment variation was found across the population for seedling traits with distinct trait grouping for root size-related traits and root distribution-related traits. Quantitative trait locus(QTL) analysis identified a total of 59 seedling trait QTLs. Across two nitrate treatments, 27 root QTLs were specific to the nitrate treatment. Transcriptomic analyses for one of the QTLs on chromosome 2 D, which was found under low nitrate conditions, revealed gene enrichment in N-related biological processes and 28 differentially expressed genes with possible involvement in a root angle response. Together, these findings provide genetic insight into root system architecture and plant adaptive responses to nitrate, as well as targets that could help improve N capture in wheat.

关键词： doubled-haploid population nitrate RNA-seq quantitative trait loci root system architecture Triticum aestivum L.(wheat)

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Investigation of proton structure function F_(2)^(p)at HERA in light of an analytical solution to the Balitsky–Kovchegov equation

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Communications in Theoretical Physics 2024年第3期76卷 120-126页

作者： ranjan Saikia Pragyan Phukan Jayanta Kumar Sarma HEP laboratory Department of PhysicsTezpur UniversityTezpurAssam-784028India Department of Physics Moran CollegeMoranhatAssam-785670India

In this paper,the proton structure function F_(2)^(p)(x,Q^(2))at small-x is investigated using an analytical solution to the Balitsky–Kovchegov(BK)equation.In the context of the color dipole description of deep inelastic scattering(DIS),the structure function F_(2)^(p)(x,Q^(2))is computed by applying the analytical expression for the scattering amplitude N(k,Y)derived from the BK solution.At transverse momentum k and total rapidity Y,the scattering amplitude N(k,Y)represents the propagation of the quark-antiquark dipole in the color dipole description of DIS.Using the BK solution we extracted the integrated gluon density xg(x,Q^(2))and then compared our theoretical estimation with the LHAPDF global data fits,NNPDF3.1sx and CT18.Finally,we have investigated the behavior of F_(2)^(p)(x,Q^(2))in the kinematic region of 10^(-5)≤x≤10^(-2)and 2.5 GeV^(2)≤Q^(2)≤60 GeV^(2).Our predicted results for F_(2)^(p)(x,Q^(2))within the specified kinematic region are in good agreement with the recent high-precision data for F_(2)^(p)(x,Q^(2))from HERA(H1 Collaboration)and the LHAPDF global parametrization group NNPDF3.1sx.

关键词： quantum chromodynamics(QCD) perturbative QCD(pQCD) proton structure function small-x Balitsky-Kovchegov equation

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Doppler-resilient waveform design in integrated MIMO radar-communication systems

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Science China(Information Sciences) 2024年第1期67卷 187-202页

作者： Zhengchun ZHOU Bing LIU Bingsheng SHEN Avik ranjan ADHIKARY Pingzhi FAN Institute of Mobile Communications Southwest Jiaotong University Department of Mathematics Southwest Jiaotong University

In recent years,the increased high-rate wireless services(5G and 6G) and reliable sensing capabilities(automotive radar,air traffic control,geophysical monitoring),have led to more serious spectrum congestion.Conventionally,radars and communication systems are often seen to be “competing” for the same resources.In this scenario,an integrated platform for radar and communication systems seems to be an optimal solution to address the problem.In this paper,we propose a preamble waveform design based on zero-correlation zone(ZCZ) and zero odd-correlation zone(ZOCZ) sequence sets,which are Doppler resilient in multiple-input,multiple-output(MIMO) radar.The preamble waveforms can be simultaneously used for channel estimation and radar sensing in RadCom systems.The ambiguity function of the proposed waveforms displays low/zero sidelobes within a time-delay correlation zone.Finally,we give some numerical results to show the efficiency of the proposed waveforms in radar sensing and channel estimation.

关键词： ambiguity function correlation channel estimation integrated radar and communication (RadCom) systems MIMO radar zero correlation zone (ZCZ) sequence set zero odd-correlation zone (ZOCZ) sequence set

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Sodium glucose cotransporter-2 inhibitors and heart disease:Current perspectives

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World Journal of Cardiology 2024年第5期16卷 240-259页

作者： Sunetra Mondal Subhodip Pramanik Vibhu ranjan Khare Cornelius James Fernandez Joseph M Pappachan Department of Endocrinology NRS Medical CollegeKolkata 700020West BengalIndia Department of Endocrinology Neotia Getwel Multispecialty HospitalsSiliguri 734010West BengalIndia Department of Endocrinology and Metabolism Pilgrim HospitalUnited Lincolnshire Hospitals NHS TrustBoston PE219QSUnited Kingdom Department of Endocrinology and Metabolism Lancashire Teaching Hospitals NHS TrustPreston PR29HTUnited Kingdom Faculty of Science Manchester Metropolitan UniversityManchester M156BHUnited Kingdom Faculty of Biology Medicine&HealthThe University of ManchesterManchester M139PLUnited Kingdom

Sodium glucose cotransporter-2 inhibitors(SGLT-2i)are antidiabetic medications with remarkable cardiovascular(CV)benefits proven by multiple randomised controlled trials and real-world data.These drugs are also useful in the prevention of CV disease(CVD)in patients with diabetes mellitus(DM).Although DM as such is a huge risk factor for CVD,the CV benefits of SGLT-2i are not just because of antidiabetic effects.These molecules have proven beneficial roles in prevention and management of nondiabetic CVD and renal disease as well.There are various molecular mechanisms for the organ protective effects of SGLT-2i which are still being elucidated.Proper understanding of the role of SGLT-2i in prevention and management of CVD is important not only for the cardiologists but also for other specialists caring for various illnesses which can directly or indirectly impact care of heart diseases.This clinical review compiles the current evidence on the rational use of SGLT-2i in clinical practice.

关键词： SGLT2 inhibitors SGLT2i Cardiovascular disease Heart failure Atherosclerotic cardiovascular disease Diabetic kidney disease

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Efficacy of stromal vascular fraction for knee osteoarthritis:A prospective,single-centre,non-randomized study with 2 years follow-up

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World Journal of Orthopedics 2024年第5期15卷 457-468页

作者： Madhan Jeyaraman Naveen Jeyaraman Tarun Jayakumar Swaminathan Ramasubramanian Rajni ranjan Saurabh Kumar Jha Ashim Gupta Department of Orthopaedics ACS Medical College and HospitalDr MGR Educational and Research InstituteChennaiTamil Nadu 600077India Department of Biotechnology School of Engineering and TechnologySharda UniversityGreater NoidaUttar Pradesh 201310India Department of Orthopaedics and Regenerative Medicine South Texas Orthopaedic Research InstituteLaredoTX 78045United States Department of Orthopaedics KIMS-Sunshine HospitalHyderabadTelangana 500032India Department of Orthopaedics Government Medical CollegeOmandurar Government EstateChennaiTamil Nadu 600002India Department of Orthopaedics School of Medical Sciences and ResearchSharda UniversityGreater NoidaUttar Pradesh 201306India Department of Zoology Kalindi CollegeUniversity of DelhiNew Delhi 110008India Department of Orthopaedics and Regenerative Medicine Regenerative OrthopaedicsNoida 201301Uttar PradeshIndia Department of Orthopaedics and Regenerative Medicine Future BiologicsLawrencevilleGA 30043United States Department of Orthopaedics and Regenerative Medicine BioIntegrateLawrencevilleGA 30043United States

BACKGROUND Current osteoarthritis(OA)treatments focus on symptom relief without addressing the underlying disease process.In regenerative medicine,current treatments have limitations.In regenerative medicine,more research is needed for intra-articular stromal vascular fraction(SVF)injections in OA,including dosage optimization,long-term efficacy,safety,comparisons with other treatments,and mechanism exploration.AIM To compare the efficacy of intra-articular SVF with corticosteroid(ICS)injections in patients with primary knee OA.METHODS The study included 50 patients with Kellgren-Lawrence grades II and III OA.Patients were randomly assigned(1:1)to receive either a single intra-articular SVF injection(group A)or a single intra-articular ICS(triamcinolone)(group B)injection.Patients were followed up at 1,3,6,12,and 24 months.Visual analog score(VAS)and International Knee Documentation Committee(IKDC)scores were administered before the procedure and at all followups.The safety of SVF in terms of adverse and severe adverse events was recorded.Statistical analysis was performed with SPSS Version 26.0,IBM Corp,Chicago,IL,United States.RESULTS Both groups had similar demographics and baseline clinical characteristics.Follow-up showed minor patient loss,resulting in 23 and 24 in groups A and B respectively.Group A experienced a notable reduction in pain,with VAS scores decreasing from 7.7 to 2.4 over 24 months,compared to a minor reduction from 7.8 to 6.2 in Group B.This difference in pain reduction in group A was statistically significant from the third month onwards.Additionally,Group A showed significant improvements in knee functionality,with IKDC scores rising from 33.4 to 83.10,whereas Group B saw a modest increase from 36.7 to 45.16.The improvement in Group A was statistically significant from 6 months and maintained through 24 months.CONCLUSION Our study demonstrated that intra-articular administration of SVF can lead to reduced pain and improved knee function in patients with primary knee OA.More adequately powe

关键词： Knee osteoarthritis Adipose tissue Stromal vascular fraction Regenerative medicine Orthobiologics

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Improving Heat Transfer in Parabolic Trough Solar Collectors by Magnetic Nanofluids

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Energy Engineering 2024年第4期121卷 835-848页

作者： Ritesh Singh Abhishek Gupta Akshoy ranjan Paul Bireswar Paul Suvash C.Saha Department of Applied Mechanics Motilal Nehru National Institute of Technology AllahabadPrayagrajIndia Department of Mechanical and Mechatronic Engineering University of Technology SydneySydneyAustralia

A parabolic trough solar collector(PTSC)converts solar radiation into thermal energy.However,low thermal efficiency of PTSC poses a hindrance to the deployment of solar thermal power plants.Thermal performance of PTSC is enhanced in this study by incorporating magnetic nanoparticles into the working fluid.The circular receiver pipe,with dimensions of 66 mm diameter,2 mm thickness,and 24 m length,is exposed to uniform temperature and velocity conditions.The working fluid,Therminol-66,is supplemented with Fe3O4 magnetic nanoparticles at concentrations ranging from 1%to 4%.The findings demonstrate that the inclusion of nanoparticles increases the convective heat transfer coefficient(HTC)of the PTSC,with higher nanoparticle volume fractions leading to greater heat transfer but increased pressure drop.The thermal enhancement factor(TEF)of the PTSC is positively affected by the volume fraction of nanoparticles,both with and without a magnetic field.Notably,the scenario with a 4%nanoparticle volume fraction and a magnetic field strength of 250 G exhibits the highest TEF,indicating superior thermal performance.These findings offer potential avenues for improving the efficiency of PTSCs in solar thermal plants by introducing magnetic nanoparticles into the working fluid.

关键词： Parabolic trough solar collector(PTSC) magnetic nanofluid(MNF) heat transfer convective heat transfer coefficient(HTC) thermal enhancement factor(TEF)

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Erosive Wear Study of PPLSF/Glass Fiber Reinforced Hybrid Laminates

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Journal of Harbin Institute of Technology(New Series) 2024年第2期31卷 68-79页

作者： Chetana Tripathy Deepak Kumar Mohapatra Chitta ranjan Deo Punyapriya Mishra Department of Mechanical Engineering Veer Surendra Sai University of Technology(VSSUT)Sambalpur 768018India

This work is focused to examine the erosive performance of hybrid Palmyra palm leaf stalk fiber(PPLSF)/glass polyester laminate against solid particle bombardment.A hand lay-up method was adopted for the fabricating four piles of five distinct laminates with different stacking order glass and PPLSF layers.Amongst them,one group of pure PPLSF and pure E-glass laminates were fabricated.The hybrid laminates were exposed to high speed stream of solid sand particle at three distinct impact velocities(48,70 and 82 m/s)and four different angles of impingement(30°,45°,60°and 90°).The effect of particle velocity,angle of impingement and stacking order on both wear rate and efficiency were highlighted.The experimental assessment reveals a significant improvement in erosive wear resistance properties due to hybridization of PPLSF with E-glass.Again,the laminates with PPLSF layer as skin and glass as core layer exhibited better erosive wear resistance properties than other types of laminates.Further,a maximum value of erosion at lower velocity(48 m/s)is also noticed at 45°impingement angle.However,at high velocity of impact 70 m/s and 82 m/s,the maximum rate of erosion has been shifted from 45°impact angle to 60°impact angle.The alternation of this semi-ductile character to semi-brittle character is evidenced by analyzing the experimental data.Further to justify the mode of erosion,the eroded surface samples were inspected by scanning electron microscope(SEM).

关键词： hybrid composites erosion wear void micro-hardness SEM

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Erosion Wear Behaviour of Kenaf/Glass Hybrid Polymer Composites

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Journal of Harbin Institute of Technology(New Series) 2024年第1期31卷 78-89页

作者： Chandrakanta Mishra Deepak Kumar Mohapatra Chitta ranjan Deo Punyapriya Mishra Kiran Kumar Ekka Department of Mechanical Engineering Veer Surendra Sai University of TechnologySambalpur 768018India

The awareness amongst the researchers to develop an environment friendly sustainable material leads to explore new class of plant-based fiber for making composites. Hybridization of such plant-based fiber with inclusion of engineered fiber is one of the promising methods to not only enhanced the mechanical performance but also suppressed the drawbacks that associate with such plant-based fiber to some extent. A usual hand lay-up method was taken-up in this work to fabricate four layered of hybrid kenaf(K)/glass(G)polyester laminates with different stacking order such as KKKK,KGKG,KGGK,GKKG and GGGG. The erosive character of the laminates was examined under three distinct particle velocities(48m/s, 70m/s,82m/s)and four different impact angles(30°, 45°, 60°, 90°). All fabricated laminates exhibited a semiductile character at lower velocities(48m/s and70m/s)as peak wear rate was observed at45° impact angle. However,they showed a semi-brittle character at high velocity(82m/s)as maximum rate of erosion was noticed at60° impact angle. Again,the influence of stacking order of piles on erosion wear was also clearly noticed. Moreover,the semi-brittle/semi-ductile characterization was also evidenced in accordance to the range of erosion efficiencies. The micro-structures of worn surfaces were inspected thoroughly from the images of scanning electron microscope(SEM)to evident the mechanism of erosion.

关键词： hybrid composites erosion wear void micro⁃hardness

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Seasonal Prediction of Indian Summer Monsoon Using WRF: A Dynamical Downscaling Perspective

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Open Journal of Modelling and Simulation 2024年第1期12卷 1-32页

作者： Manas ranjan Mohanty Uma Charan Mohanty Department of Atmospheric and Oceanic Sciences University of California Los Angeles USA Centre for Climate Smart Agriculture Siksha O Anusandhan Deemed to Be University Odisha India

Seasonal forecasting of the Indian summer monsoon by dynamically downscaling the CFSv2 output using a high resolution WRF model over the hindcast period of 1982-2008 has been performed in this study. The April start ensemble mean of the CFSv2 has been used to provide the initial and lateral boundary conditions for driving the WRF. The WRF model is integrated from 1st May through 1st October for each monsoon season. The analysis suggests that the WRF exhibits potential skill in improving the rainfall skill as well as the seasonal pattern and minimizes the meteorological errors as compared to the parent CFSv2 model. The rainfall pattern is simulated quite closer to the observation (IMD) in the WRF model over CFSv2 especially over the significant rainfall regions of India such as the Western Ghats and the central India. Probability distributions of the rainfall show that the rainfall is improved with the WRF. However, the WRF simulates copious amounts of rainfall over the eastern coast of India. Surface and upper air meteorological parameters show that the WRF model improves the simulation of the lower level and upper-level winds, MSLP, CAPE and PBL height. The specific humidity profiles show substantial improvement along the vertical column of the atmosphere which can be directly related to the net precipitable water. The CFSv2 underestimates the specific humidity along the vertical which is corrected by the WRF model. Over the Bay of Bengal, the WRF model overestimates the CAPE and specific humidity which may be attributed to the copious amount of rainfall along the eastern coast of India. Residual heating profiles also show that the WRF improves the thermodynamics of the atmosphere over 700 hPa and 400 hPa levels which helps in improving the rainfall simulation. Improvement in the land surface fluxes is also witnessed in the WRF model.

关键词： Dynamical Downscaling Regional and Mesoscale Modeling Diabatic Heating WRF

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Neuroprotective effects of G9a inhibition through modulation of peroxisome-proliferator activator receptor gamma-dependent pathways by miR-128

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Neural Regeneration Research 2024年第11期19卷 2532-2542页

作者： Aina Bellver-Sanchis Pedro AAvila-López Iva Tic David Valle-García Marta Ribalta-Vilella Luis Labrador Deb ranjan Banerjee Ana Guerrero Gemma Casadesus Coralie Poulard Mercè Pallàs Christian Grinán-Ferré Department of Pharmacology and Therapeutic Chemistry Institut de Neurociències-Universitat de BarcelonaBarcelonaSpain Department of Biochemistry and Molecular Genetics Feinberg School of MedicineNorthwestern UniversityChicagoILUSA Institute of Biotechnology National Autonomous University of MexicoCuernavacaMexico Department of Pharmacology and Therapeutics Health Science Center-University of FloridaGainesvilleFLUSA Department of Chemistry National Institute of Technology DurgapurM G AvenueDurgapurWest BengalIndia Cancer Research Cancer Lyon Universitéde LyonLyonFrance Inserm U1052 Centre de Recherche en Cancérologie de LyonLyonFrance CNRS UMR5286 Centre de Recherche en Cancérlogie de LyonLyonFrance Centro de Investigación en Red Enfermedades Neurodegenerativas(CIBERNED)Instituto de Salud Carlos IIIMadridSpain Neuroimmunology Department National Institute of Neurology and Neurosurgery“Manuel Velasco Suárez”Mexico CityMexico

Dysregulation of G9a,a histone-lysine N-methyltransferase,has been observed in Alzheimer’s disease and has been correlated with increased levels of chronic inflammation and oxidative stress.Likewise,microRNAs are involved in many biological processes and diseases playing a key role in pathogenesis,especially in multifactorial diseases such as Alzheimer’s disease.Therefore,our aim has been to provide partial insights into the interconnection between G9a,microRNAs,oxidative stress,and neuroinflammation.To better understand the biology of G9a,we compared the global microRNA expression between senescence-accelerated mouse-prone 8(SAMP8)control mice and SAMP8 treated with G9a inhibitor UNC0642.We found a downregulation of miR-128 after a G9a inhibition treatment,which interestingly binds to the 3′untranslated region(3′-UTR)of peroxisome-proliferator activator receptor γ(PPARG)mRNA.Accordingly,Pparg gene expression levels were higher in the SAMP8 group treated with G9a inhibitor than in the SAMP8 control group.We also observed modulation of oxidative stress responses might be mainly driven Pparg after G9a inhibitor.To confirm these antioxidant effects,we treated primary neuron cell cultures with hydrogen peroxide as an oxidative insult.In this setting,treatment with G9a inhibitor increases both cell survival and antioxidant enzymes.Moreover,up-regulation of PPARγby G9a inhibitor could also increase the expression of genes involved in DNA damage responses and apoptosis.In addition,we also described that the PPARγ/AMPK axis partially explains the regulation of autophagy markers expression.Finally,PPARγ/GADD45αpotentially contributes to enhancing synaptic plasticity and neurogenesis after G9a inhibition.Altogether,we propose that pharmacological inhibition of G9a leads to a neuroprotective effect that could be due,at least in part,by the modulation of PPARγ-dependent pathways by miR-128.

关键词： aging cognitive decline epigenetics G9a inhibition microRNAs miR-128 peroxisome-proliferator activator receptorγ(PPARγ) PPARG SAMP8

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