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A Simple Method for Preparation of Rice Genomic DNA

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Rice science 2010年第4期17卷 326-329页

作者： SUN Chuan HE Ying-hong CHEN Gang rao yu-chun ZHANG Guang-heng GAO Zhen-yu LIU Jian Ju Pei-na Hu Jiang Guo Long-biao QIAN Qian ZENG Da-li State Key Laboratory of Rice Biology China National Rice Research Institute Hangzhou 310006 China Agricultural College Yangzhou University Yangzhou 225009 China

The extraction of DNA is often the most time consuming and laborious step in high-throughput molecular genetic analysis and marker assisted selection （MAS） programs. A simple method for preparation of rice genomic DNA was developed. A small amount （1~50 mg） of leaf tissue of rice seedling, 500 pL of extraction buffer, and one steel bead were put into a 2-mL microcentrifuge tube. After vigorously mashing for 2 min, 5 μL of supernatant was directly applied to PCR amplification. Otherwise, the supematant was precipitated with two times volume of ethanol to obtain high quality genomic DNA. This method is simple, rapid, low cost, and reliable for PCR analysis. One person can manipulate as many as 96 samples for PCR in 10 min. It is especially suitable for genotyping of large number of samples.

关键词： DNA extraction high-throughput PCR marker assisted selection gene mapping rice

Characterization and Fine Mapping of Non-panicle Mutant (nop) in Rice

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Rice science 2009年第3期16卷 165-172页

作者： Wu Kun rao yu-chun Hu Jiang ZHU Guan-lin ZHANG Guang-hen Hu Xin-ming Guo Long-biao WANG Yong-hong QIAN Qian ZENG Da-li State Key Laboratory of Rice Biology China National Rice Research Institute Hangzhou 310006 China State Key Laboratory of Plant Genomics and National Center for Plant Gene Research Institute of Genetics and Developmental Biology Chinese Academy of Sciences Beijing 100101 China Agricultural College Yangzhou University Yangzhou 225009 China

A mutant of panicle differentiation in rice called non-panicle （nop） was discovered in the progeny of a cross between 93-11 and Nipponbare. The mutant exhibits normal plant morphology but has apparently few tillers. The most striking change in nop is that its panicle differentiation is blocked, with masses of fluffy bract nodes generate from the positions where rachis branches normally develop in wild-type plants. Genetic analysis suggests that nop is controlled by a single recessive gene, which is temporarily named Nop（t）. Based on its mutant phenotype, Nop（t） represents a key gene controlling the initiation of inflorescence differentiation, By using simple sequence repeat markers and sequence tagged site markers, Nop（t） gene was fine mapped in a 102-kb interval on the long arm of chromosome 6. These results will facilitate the positional cloning and functional studies of the gene.

关键词： non-panicle gene panicle differentiation fine mapping rice (Oryza sativa)

Infrared small target detection based on spatial attention density peaks searching

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Optoelectronics Letters 2025年第2期21卷 90-96页

作者： rao Junmin LU Siyu LIU Shijian LI Fanming CAS Key Laboratory of Infrared System Detection and Imaging Technology Shanghai Institute of Technical Physics University of Chinese Academy of Sciences Shanghai Institute of Technical Physics Chinese Academy of Sciences School of Information Science and Technology Shanghai Tech University

The detection of small targets poses a significant challenge for infrared search and tracking (IRST) systems,as they must strike a delicate balance between accuracy and *** this paper,we propose a detection algorithm based on spatial attention density peaks searching (SADPS) and an adaptive window selection ***,the difference-of-Gaussians (DoG) filter is introduced for preprocessing raw infrared ***,the image is processed by ***,an adaptive window selection scheme is applied to obtain window templates for the target scale ***,the small target feature is used to enhance the target and suppress the ***,the true targets are segmented through a *** experimental results show that compared with the seven state-of-the-art small targets detection baseline algorithms,the proposed method not only has better detection accuracy,but also has reasonable time consumption.

关键词： Infrared imaging

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水稻和小麦根尖细胞壁多糖的铝积累能力比较

植物科学学报 2019年第4期37卷 513-520页

作者：刘庆王智怡吴坤邢承华常虹饶玉春蔡妙珍浙江师范大学地理与环境科学学院浙江金华321004 金华职业技术学院浙江金华321004 浙江师范大学化学与生命科学学院浙江金华321004

采用水培法比较4种禾本科植物水稻(Oryza sativa L.)、玉米(Zea mays L.)、高粱(Sorghum bicolor(L.) Moench)和小麦(Triticum aestivum L.) 8个基因型的抗铝(Al)能力,并对他们在Al积累后细胞壁的多糖组分进行分析。结果显示,在5~200μm... 详细信息

采用水培法比较4种禾本科植物水稻(Oryza sativa L.)、玉米(Zea mays L.)、高粱(Sorghum bicolor(L.) Moench)和小麦(Triticum aestivum L.) 8个基因型的抗铝(Al)能力,并对他们在Al积累后细胞壁的多糖组分进行分析。结果显示,在5~200μmol/L Al处理下,水稻抗Al能力较强,而小麦抗Al能力较弱。在50μmol/L Al处理下,小麦根尖的果胶和半纤维素1含量的增幅明显高于水稻。水稻基因型‘日本晴’与‘浙辐802’的细胞壁Al含量分别占根尖总Al含量的78. 7%和91. 6%;小麦基因型‘扬麦18’与‘扬麦16’Al含量分别占根尖总Al含量的64.9%和72.1%。Al吸附-解吸实验结果显示,小麦根尖细胞壁上Al的吸附量高于水稻。研究结果表明,细胞壁是Al积累的主要部位,对Al敏感的水稻和小麦基因型细胞壁中的Al主要分布在果胶中;而对Al耐性较强的水稻和小麦基因型细胞壁中的Al主要分布在半纤维素1中。

关键词：水稻小麦铝毒细胞壁细胞壁多糖

水稻腺苷5′-磷酰硫酸激酶编码基因的克隆及其酶活分析

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中国水稻科学 2015年第6期29卷 571-577页

作者：王德珍陆璐佳姜昭君饶玉春孙梅好浙江师范大学化学与生命科学学院浙江金华321004

硫是植物生长所必需的大量元素之一。植物通过根系吸收土壤中的硫酸盐,经ATP硫酸化酶活化为腺苷5′-磷酰硫酸(adenosine 5′-phosphosulfate,APS)。APS的代谢包括初级代谢和次级代谢,分别是APS还原酶催化APS生成亚硫酸盐;腺苷5′-磷酰... 详细信息

硫是植物生长所必需的大量元素之一。植物通过根系吸收土壤中的硫酸盐,经ATP硫酸化酶活化为腺苷5′-磷酰硫酸(adenosine 5′-phosphosulfate,APS)。APS的代谢包括初级代谢和次级代谢,分别是APS还原酶催化APS生成亚硫酸盐;腺苷5′-磷酰硫酸激酶(adenosine 5′-phosphosulfate kinase,APSK)催化APS磷酸化生成3′-磷酸-腺苷5′-磷酰硫酸(3′phosphoadenosine 5′-phosphosulfate,PAPS),PAPS进一步作为硫酸根供体参与胞内的硫酸化反应。近年来的研究表明,拟南芥APSK在调节硫的初级和次级代谢的过程中具有重要功能,且受氧化胁迫的APSK1在亚基C86和C119间形成二硫键降低其催化活性。水稻的同工酶是否也会受到氧化还原调控尚无相关报道。对APSK序列进行分析,发现水稻APSK1含有与拟南芥APSK1C86和C69同源的半胱氨酸。本研究对水稻APSK1基因进行了克隆、双突变和酶活分析。OsAPSK及双突变C36A/C69A经原核表达、纯化,获得了OsAPSK1及双突变蛋白。体外酶活分析表明,在氧化环境中OsAPSK1活性受到抑制,而C36A/C69A双突变蛋白不受氧化环境的影响。推测水稻胞内受到氧化胁迫时会降低OsAPSK1的活性,从而促进还原型谷胱甘肽的合成,提高水稻的抗氧化能力。通过分析PAPS的含量与氧化胁迫之间的相关性及不同OsAPS亚型的活性调节机制等将有利于进一步阐明APSK在胞内的功能。

关键词：水稻硫同化腺苷5′-磷酰硫酸激酶半胱氨酸氧化还原环境

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稻曲病菌UvHog1基因的克隆及表达分析

中国水稻科学 2014年第1期28卷 9-14页

作者：饶玉春丁正中陈析丰曾大力马伯军顾志敏浙江师范大学化学与生命科学学院浙江金华321004 中国水稻研究所水稻生物学国家重点实验室杭州310006 金华市艾青中学浙江金华321015

稻曲病由稻曲病菌引起,是水稻穗部的重要病害。利用同源克隆和RACE技术,根据丝状真菌相对保守的氨基酸序列设计简并引物,从稻曲病菌中分离了丝裂原活化蛋白激酶(MAPK)编码基因的全长cDNA序列,命名为UvHog1。UvHog1含有MAPK保守的蛋白激... 详细信息

稻曲病由稻曲病菌引起,是水稻穗部的重要病害。利用同源克隆和RACE技术,根据丝状真菌相对保守的氨基酸序列设计简并引物,从稻曲病菌中分离了丝裂原活化蛋白激酶(MAPK)编码基因的全长cDNA序列,命名为UvHog1。UvHog1含有MAPK保守的蛋白激酶激活域(TGY),序列与稻瘟病菌MgOsm1(AAF09475.1)、球孢白僵菌BbHog1(AAS77871.1)、烟曲霉AfOsm1(XP752664.1)和隐球酵母CrHog1(AAM26267.1)等MAPK高度同源,相似性分别为95%、93%、88%和81%。系统聚类结果表明,UvHog1与酵母Hog1MAPK同源。在盐胁迫条件下,UvHog1的相对表达量明显降低,表明UvHog1参与了对盐胁迫的信号响应。

关键词：稻曲病菌 Hog1 克隆表达分析

Passive activity enhances residual control ability in patients with complete spinal cord injury

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Neural Regeneration Research 2025年第8期20卷 2337-2347页

作者： Yanqing Xiao Mingming Gao Zejia He Jia Zheng Hongming Bai Jia-Sheng rao Guiyun Song Wei Song Xiaoguang Li Beijing Key Laboratory for Biomaterials and Neural Regeneration Beijing Advanced Innovation Center for Biomedical EngineeringSchool of Biological Science and Medical EngineeringBeihang UniversityBeijingChina Department of Rehabilitation Evaluation China Rehabilitation Research CenterBeijingChina Cardiac Center Beijing Children’s HospitalCapital Medical UniversityBeijingChina The State Key Laboratory of Virtual Reality Technology and Systems Beihang UniversityBeijingChina Department of Rehabilitation Engineering China Rehabilitation Science InstituteBeijingChina

Patients with complete spinal cord injury retain the potential for volitional muscle activity in muscles located below the spinal injury ***,because of prolonged inactivity,initial attempts to activate these muscles may not effectively engage any of the remaining neurons in the descending pathway.A previous study unexpectedly found that a brief clinical round of passive activity significantly increased volitional muscle activation,as measured by surface *** this study,we further explored the effect of passive activity on surface electromyographic signals during volitional control tasks among individuals with complete spinal cord *** patients with chronic complete thoracic spinal cord injury were *** electromyography data from eight major leg muscles were acquired and compared before and after the passive activity *** results indicated that the passive activity led to an increased number of activated volitional muscles and an increased frequency of *** the cumulative root mean square of surface electromyography amplitude for volitional control of movement showed a slight increase after passive activity,the difference was not statistically *** findings suggest that brief passive activity may enhance the ability to initiate volitional muscle activity during surface electromyography tasks and underscore the potential of passive activity for improving residual motor control among patients with motor complete spinal cord injury.

关键词： complete spinal cord injury cycle training epidural electrical stimulation motor training passive activity physiological state spinal cord circuit surface electromyography volitional control task

水稻纤维素合酶催化亚基的编码基因BC88的表达分析

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中国水稻科学 2015年第2期29卷 126-134页

作者：李晓静徐多多徐益敏翟开恩杨窑龙潘建伟饶玉春浙江师范大学化学与生命科学学院浙江金华321004 中国水稻研究所水稻生物学国家重点实验室杭州310006

禾本科植物的脆秆突变体是进行次生细胞壁研究的理想材料。对水稻bc88突变体的前期研究表明,BC88编码一个纤维素合酶催化亚基OsCesA9。通过水稻遗传转化BC88启动子融合GUS的载体,检测到BC88在根、茎、叶、鞘、花中均有表达,并且在茎和... 详细信息

禾本科植物的脆秆突变体是进行次生细胞壁研究的理想材料。对水稻bc88突变体的前期研究表明,BC88编码一个纤维素合酶催化亚基OsCesA9。通过水稻遗传转化BC88启动子融合GUS的载体,检测到BC88在根、茎、叶、鞘、花中均有表达,并且在茎和根中表达量较高,这可能是由于BC88突变后影响了根系的正常发育及功能,进而影响地上部的生长,最终导致bc88半矮表型。将BC88与GFP的融合表达载体转入水稻和烟草表皮细胞中,共聚焦显微观察显示,OsCesA9定位在质膜上。质膜是纤维素合成的主要场所,这充分说明了OsCesA9是水稻次生细胞壁中纤维素合成必不可少的纤维素合酶催化亚基之一。本研究为BC88执行其生物学功能提供了新依据,对进一步认识该基因在调节次生细胞壁合成等方面的作用具有重要的意义。

关键词：水稻 BC88 OsCesA 表达定位

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水稻基因组DNA简易制备方法

中国水稻科学 2010年第6期24卷 677-680页

作者：孙川陈刚饶玉春张光恒高振宇刘坚鞠培娜胡江郭龙彪钱前曾大力中国水稻研究所水稻生物学国家重点实验室浙江杭州310006 扬州大学农学院江苏扬州225009

介绍了一种用于PCR的水稻基因组DNA的快速制备方法。该方法只需将少量(1～50mg)样品、适量提取液(500μL)和一粒钢珠放入2mL离心管,在细胞破碎仪中粉碎2min,经离心后可直接取少量(约5μL)上清液作为PCR的模板DNA,也可进一步根据需要实... 详细信息

介绍了一种用于PCR的水稻基因组DNA的快速制备方法。该方法只需将少量(1～50mg)样品、适量提取液(500μL)和一粒钢珠放入2mL离心管,在细胞破碎仪中粉碎2min,经离心后可直接取少量(约5μL)上清液作为PCR的模板DNA,也可进一步根据需要实现高质量DNA的提取。该方法具有成本低、操作快速简便等优点,一个人可以在10min内完成96份样品DNA的简易制备,特别适合高通量的分子检测。

关键词： DNA提取高通量PCR扩增样品制备方法水稻