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Identific tion of quantitative trait loci and associated candidate genes for pregnancy success in Angus–Brahman crossbred heifers

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Journal of Animal Science and Biotechnology 2024年第1期15卷 162-170页

作者： quinn a.hoorn Gabriel A.Zayas Eduardo E.Rodriguez Laura M.Jensen Raluca G.Mateescu Peter J.Hansen Department of Animal Sciences Donald Henry Barron Reproductive and Perinatal Biology Research Programand the Genetics InstituteUniversity of FloridaGainesvilleFLUSA School of Applied Systems Biology La Trobe UniversityBundooraVIC 3083Australia

Background In beef cattle, more than 50% of the energy input to produce a unit of beef is consumed by the female that produced the calf. Development of genomic tools to identify females with high genetic merit for reproductive function could increase the profitability and sustainability of beef *** Genome-wide association studies(GWAS) were performed using a single-step genomic best linear unbiased prediction approach on pregnancy outcome traits from a population of Angus–Brahman crossbred heifers. Furthermore, a validation GWAS was performed using data from another farm. Heifers were genotyped with the Bovine GGP F250 array that contains 221,077 SNPs. In the discovery population, heifers were bred in winter breeding seasons involving a single round of timed artificial insemination(AI) followed by natural mating for 3 months. Two phenotypes were analyzed: pregnancy outcome to first-service AI(PAI;n = 1,481) and pregnancy status at the end of the breeding season(PEBS;n = 1,725). The heritability was estimated as 0.149 and 0.122 for PAI and PEBS, respectively. In the PAI model, one quantitative trait locus(QTL), located between 52.3 and 52.5 Mb on BTA7, explained about 3% of the genetic variation, in a region containing a cluster of γ-protocadherin genes and SLC25A2. Other QTLs explaining between 0.5% and 1% of the genetic variation were found on BTA12 and 25. In the PEBS model, a large QTL on BTA7 was synonymous with the QTL for PAI, with minor QTLs located on BTA5, 9, 10, 11, 19, and 20. The validation population for pregnancy status at the end of the breeding season were Angus–Brahman crossbred heifers bred by natural mating. In concordance with the discovery population, the large QTL on BTA7 and QTLs on BTA10 and 12 were *** In summary, QTLs and candidate SNPs identified were associated with pregnancy outcomes in beef heifers, including a large QTL associated with a group of protocadherin genes. Confirmation of these associations

关键词： Beef cattle Fertility GWAS QTL

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Identification of quantitative trait loci and associated candidate genes for pregnancy success in Angus–Brahman crossbred heifers

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畜牧与生物技术杂志(英文版) 2024年第1期

作者： quinn a.hoorn Gabriel A.Zayas Eduardo E.Rodriguez Laura M.Jensen Raluca G.Mateescu Peter J.Hansen

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New indices to balanceα-diversity against tree size inequality

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Journal of Forestry Research 2024年第1期35卷 229-237页

作者： Li Zhang Brady K.quinn Cang Hui Meng Lian Johan Gielis Jie Gao Peijian Shi College of Ecology and Environment Bamboo Research InstituteNanjing Forestry University159 Longpan RoadNanjing 210037People’s Republic of China Fisheries and Oceans Canada Andrews Biological Station125 Marine Science DriveSt.AndrewsNB E5B 0E4Canada Department of Mathematical Sciences Centre for Invasion BiologyStellenbosch UniversityMatieland 7602South Africa Mathematical and Physical Biosciences African Institute for Mathematical SciencesCape Town 7945South Africa Department of Biosciences Engineering University of AntwerpB-2020 AntwerpBelgium College of Life Science Xinjiang Normal University102 Xinyi RoadUrumqi 830054People’s Republic of China

The number and composition of species in a community can be quantified withα-diversity indices,including species richness(R),Simpson’s index(D),and the Shannon-Wiener index(H΄).In forest communities,there are large variations in tree size among species and individu-als of the same species,which result in differences in eco-logical processes and ecosystem ***,tree size inequality(TSI)has been largely neglected in studies using the available diversity *** TSI in the diameter at breast height(DBH)data for each of 99920 m×20 m forest census quadrats was quantified using the Gini index(GI),a measure of the inequality of size *** generalized performance equation was used to describe the rotated and right-shifted Lorenz curve of the cumulative proportion of DBH and the cumulative proportion of number of trees per *** also examined the relationships ofα-diversity indices with the GI using correlation *** generalized performance equation effectively described the rotated and right-shifted Lorenz curve of DBH distributions,with most root-mean-square errors(990 out of 999 quadrats)being<*** were significant positive correlations between each of threeα-diversity indices(i.e.,R,D,and H’)and the ***,the total abundance of trees in each quadrat did not significantly influence the *** means that the TSI increased with increasing spe-cies ***,two new indices are proposed that can balanceα-diversity against the extent of TSI in the com-munity:(1−GI)×D,and(1−GI)×H’.These new indices were significantly correlated with the original D and H΄,and did not increase the extent of variation within each group of *** study presents a useful tool for quantifying both species diversity and the variation in tree sizes in forest communities,especially in the face of cumulative species loss under global climate change.

关键词： Diameter at breast height(DBH) Gini index Shannon-Wiener index Simpson’s index Quadrat Tree size

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The secondary injury cascade after spinal cord injury: an analysis of local cytokine/chemokine regulation

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Neural Regeneration Research 2024年第6期19卷 1308-1317页

作者： Daniel J.Hellenbrand Charles M.quinn Zachariah J.Piper Ryan T.Elder Raveena R.Mishra Taylor L.Marti Phoebe M.Omuro Rylie M.Roddick Jae Sung Lee William L.Murphy Amgad S.Hanna Department of Neurosurgery University of Wisconsin-Madison School of Medicine and Public Health Department of Biomedical Engineering University of Wisconsin-Madison Department of Orthopedics and Rehabilitation University of Wisconsin-Madison Department of Materials Science and Engineering University of Wisconsin-Madison Forward BIO Institute University of Wisconsin-Madison

After spinal cord injury, there is an extensive infiltration of immune cells, which exacerbates the injury and leads to further neural degeneration. Therefore, a major aim of current research involves targeting the immune response as a treatment for spinal cord injury. Although much research has been performed analyzing the complex inflammatory process following spinal cord injury, there remain major discrepancies within previous literature regarding the timeline of local cytokine regulation. The objectives of this study were to establish an overview of the timeline of cytokine regulation for 2 weeks after spinal cord injury, identify sexual dimorphisms in terms of cytokine levels, and determine local cytokines that significantly change based on the severity of spinal cord injury. Rats were inflicted with either a mild contusion, moderate contusion, severe contusion, or complete transection, 7 mm of spinal cord centered on the injury was harvested at varying times post-injury, and tissue homogenates were analyzed with a Cytokine/Chemokine 27-Plex assay. Results demonstrated pro-inflammatory cytokines including tumor necrosis factor α, interleukin-1β, and interleukin-6 were all upregulated after spinal cord injury, but returned to uninjured levels within approximately 24 hours post-injury, while chemokines including monocyte chemoattractant protein-1 remained upregulated for days post-injury. In contrast, several anti-inflammatory cytokines and growth factors including interleukin-10 and vascular endothelial growth factor were downregulated by 7 days post-injury. After spinal cord injury, tissue inhibitor of metalloproteinase-1, which specifically affects astrocytes involved in glial scar development, increased more than all other cytokines tested, reaching 26.9-fold higher than uninjured rats. After a mild injury, 11 cytokines demonstrated sexual dimorphisms; however, after a severe contusion only leptin levels were different between female and male rats. In conclus

关键词： astrocytes chemokines cytokines inflammation macrophages microglia secondary damage spinal cord injury

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Optimizing laser coupling,matter heating,and particle acceleration from solids using multiplexed ultraintense lasers

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Matter and Radiation at Extremes 2024年第4期9卷 16-28页

作者： Weipeng Yao Motoaki Nakatsutsumi Sébastien Buffechoux Patrizio Antici Marco Borghesi Andrea Ciardi Sophia N.Chen Emmanuel d’Humières Laurent Gremillet Robert Heathcote Vojtech Horny Paul McKenna Mark N.quinn Lorenzo Romagnani Ryan Royle Gianluca Sarri Yasuhiko Sentoku Hans-Peter Schlenvoigt Toma Toncian Olivier Tresca Laura Vassura Oswald Willi Julien Fuchs LULI-CNRS CEASorbonne UniversitéEcole PolytechniqueInstitut Polytechnique de ParisF-91128 Palaiseau CedexFrance Sorbonne Université Observatoire de ParisUniversité PSLCNRSLERMAF-75005 ParisFrance INRS-EMT 1650 BoulLionel-BouletVarennesQuebec J3X 1S2Canada Center for Plasma Physics School of Mathematics and PhysicsQueen’s University BelfastBelfast BT71NNUnited Kingdom “Horia Hulubei”National Institute for Physics and Nuclear Engineering 30 Reactorului StreetRO-077125 Bucharest-MagureleRomania University of Bordeaux Centre Lasers Intenses et ApplicationsCNRSCEAUMR 5107F-33405 TalenceFrance CEA DAMDIFF-91297 ArpajonFrance Université Paris-Saclay CEALMCE91680 Bruyères-le-ChatelFrance Central Laser Facility STFC Rutherford Appleton LaboratoryDidcotUnited Kingdom SUPA Department of PhysicsUniversity of StrathclydeGlasgow G40NGUnited Kingdom Department of Physics University of NevadaRenoNevada 89557USA Institute of Laser Engineering Osaka University2-6 YamadaokaSuitaOsaka 565-0871Japan Institut fur Laser und Plasmaphysik Heinrich Heine Universitat DusseldorfDusseldorfGermany

Realizing the full potential of ultrahigh-intensity lasers for particle and radiation generation will require multi-beam arrangements due to technology ***,we investigate how to optimize their coupling with solid ***,we show that overlapping two intense lasers in a mirror-like configuration onto a solid with a large preplasma can greatly improve the generation of hot electrons at the target front and ion acceleration at the target *** underlying mechanisms are analyzed through multidimensional particle-in-cell simulations,revealing that the self-induced magnetic fields driven by the two laser beams at the target front are susceptible to reconnection,which is one possible mechanism to boost electron *** addition,the resistive magnetic field generated during the transport of the hot electrons in the target bulk tends to improve their *** simulations also indicate that such effects can be further enhanced by overlapping more than two laser beams.

关键词： laser acceleration particle

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Confirmation of a Sub-Saturn-size Transiting Exoplanet Orbiting a G Dwarf:TOI-1194 b and a Very Low Mass Companion Star: TOI-1251 B from TESS

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Research in Astronomy and Astrophysics 2024年第3期24卷 129-143页

作者： Jia-Qi Wang Xiao-Jun Jiang Jie Zheng Hanna Kellermann Arno Riffeser Liang Wang Karen A.Collins Allyson Bieryla Lars A.Buchhave Steve B.Howell Elise Furlan Eric Girardin Joao Gregorio Eric Jensen Felipe Murgas Mesut Yilmaz Sam quinn Xing Gao Ruo-Yu Zhou Frank Grupp Hui-Juan Wang CAS Key Laboratory of Optical Astronomy National Astronomical ObservatoriesChinese Academy Of SciencesBeijing 10010China University of Chinese Academy of Sciences Beijing 100049China University Observatory Munich Scheinertrsse 1.D-81679 MunichGemany Max Planck Institute for Extraterrestrial Physics Giessenbachstr.1D-85748 GarchingGermany National Astronomical Observatories/Nanjing Institute of Astronomical Optics&Technology Chinese Academy of SciencesNanjing210042China CAS Key Laboratory of Astronomical Optics&Technology Nanjing Institute of Astronomical Optics&TechnologyNanjing 210042China Center for Astrophysics Harvard&Smithsonian60 Garden Street.CambridgeMA 02138USA National Space Institute Technical University of DenmarkElektrovejDK-2800 KgsLyngbyDenmark NASA Ames Research Center Moffett FieldCA 94035USA NASA Exoplanet Science Institute Caltech/IPACMail Code 100-221200 E.California Blvd.PasadenaCA91125USA Grand Pra Observatory Switzerland Department of Physics Washington UniversitySt.LouisMO 63130.USA Department of Physics and Astronomy Swarthmore CollegeSwarthmorePA 19081USA Instituto de Astrofísica de Canarias(IAC) E-38205 La Laguna.TenerifeSpain Departamento de Astrofísica Universidad de La LagunaSpain Dept.of Astronomy and Space Sciences Ankara UniversityTandogan 06100AnkaraTurkey Xinjiang Astronomical Observatory Chinese Academy of SciencesUrumqi 830011China Urumqi No.1 Senior High School Urumqi 830002China Lijiang Gemini Observatory Lijiang 674199China

We report the confirmation of a sub-Saturn-size exoplanet,TOI-1194 b,with a mass of about 0.456+0.055-0.051M_(J),and a very low mass companion star with a mass of about 96.5±1.5 MJ,TOI-1251 *** candidates provided by the Transiting Exoplanet Survey Satellite(TESS)are suitable for further follow-up observations by ground-based telescopes with small and medium *** analysis is performed based on data from several telescopes worldwide,including telescopes in the Sino-German multiband photometric campaign,which aimed at confirming TESS Objects of Interest(TOIs)using ground-based small-aperture and medium-aperture telescopes,especially for long-period ***-1194 b is confirmed based on the consistent periodic transit depths from the multiband photometric *** measure an orbital period of 2.310644±0.000001 days,the radius is 0.767+0.045-0.041RJ and the amplitude of the RV curve is 69.4_(-7.3)^(+7.9)m s^(-1).TOI-1251 B is confirmed based on the multiband photometric and high-resolution spectroscopic data,whose orbital period is 5.963054+0.000002-0.000001days,radius is 0.947+0.035-0.033 R_(J) and amplitude of the RV curve is 9849_(-40)^(+42)ms^(-1).

关键词： planets and satellites fundamental parameters-planets and satellites gaseous planets-stars fundamental parameters-stars low-mass-methods data analysis-techniques photometric-techniques spectroscopic

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老兵

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世界科学 2024年第5期 62-63页

作者：思羽蒂莫西·奎因

小说中这位从战场归来的老兵在一个失业率达到77%的年代，为了混一口饭而选择从军，经过漫漫的太空旅行，到十分遥远的异星战场与外星人作战。在800年后，他回到了地球，但此时的世界已经物是人非。灰色的天空永远不会下雨，那是因为人...

小说中这位从战场归来的老兵在一个失业率达到77%的年代，为了混一口饭而选择从军，经过漫漫的太空旅行，到十分遥远的异星战场与外星人作战。在800年后，他回到了地球，但此时的世界已经物是人非。灰色的天空永远不会下雨，那是因为人类为了抵抗气候变暖而在大气层中释放特殊物质反射阳光（早已有科学家提出这种地球工程方案）。地球上的鸟儿全灭绝了，注视着老兵的鸽子其实是监视工具。更重要的是，人类诞生了蜂巢意识，也就是文中提到的“神”（numina）。人可以更换躯壳，到了一定时间，就将意识复制到新的躯体内，再让旧躯体连带它的意识一起归西。

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Quantifyingα-diversity as a continuous function of location——a case study of a temperate forest

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林业研究:英文版 2023年第6期34卷 1683-1691页

作者： Peijian Shi Brady K.quinn Long Chen Jie Gao Julian Schrader Bamboo Research Institute College of Ecology and EnvironmentNanjing Forestry University159 Longpan RoadNanjing 210037People’s Republic of China Tropical Silviculture and Forest Ecology University of GottingenBusgenweg 137077 GottingenGermany St.Andrews Biological Station Fisheries and Oceans Canada125 Marine Science DriveSt.AndrewsNB E5B 0E4Canada College of Life Science Xinjiang Normal University102 Xinyi RoadUrumqi 830054People’s Republic of China School of Natural Sciences Macquarie UniversitySydneyNSW 2109Australia Biodiversity Macroecology&BiogeographyUniversity of GottingenBusgenweg 137077 GottingenGermany

α-diversity describes species diversity at local *** Simpson’s and Shannon-Wiener indices are widely used to characterizeα-diversity based on species abundances within a fixed study site(e.g.,a quadrat or plot).Although such indices provide overall diversity estimates that can be analyzed,their values are not spatially continuous nor applicable in theory to any point within the study region,and thus they cannot be treated as spatial covariates for analyses of other ***,we extended the Simpson’s and Shannon-Wiener indices to create point estimates ofα-diversity for any location based on spatially explicit species occurrences within different bandwidths(i.e.,radii,with the location of interest as the center).For an arbitrary point in the study region,species occurrences within the circle plotting the bandwidth were weighted according to their distance from the center using a tri-cube kernel function,with occurrences closer to the center having greater weight than more distant *** novel kernel-basedα-diversity indices were tested using a tree dataset from a 400 m×400 m study region comprising a 200 m×200 m core region surrounded by a 100-m width buffer *** newly extendedα-diversity indices did not disagree qualitatively with the traditional indices,and the former were slightly lower than the latter by<2%at medium and large band *** present work demonstrates the feasibility of using kernel-basedα-diversity indices to estimate diversity at any location in the study region and allows them to be used as quantifiable spatial covariates or predictors for other dependent variables of interest in future ecological *** continuousα-diversity indices are useful to compare and monitor species trends in space and time,which is valuable for conservation practitioners.

关键词： Distance-based weighting Diversity continuum Kernel function Shannon-Wiener index Simpson’s index Tri-cube kernel

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Toward high-efficiency perovskite solar cells with one-dimensional oriented nanostructured electron transport materials

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Journal of Energy Chemistry 2023年第7期82卷 66-87,I0003页

作者： Yinhua Lv Bing Cai Ruihan Yuan Yihui Wu quinn Qiao Wen-Hua Zhang Yunnan Key Laboratory of Carbon Neutrality and Green Low-carbon Technologies School of Materials and EnergyYunnan UniversityKunming 650500YunnanChina School of Chemical Engineering Sichuan UniversityChengdu 610065SichuanChina Sichuan Research Center of New Materials Institute of Chemical MaterialsChina Academy of Engineering PhysicsChengdu 610200SichuanChina Mechanical and Aerospace Engineering Syracuse UniversitySyracuseNew York 13244USA Yunnan University and Southwest United Graduate School Kunming 650500YunnanChina

The unique advantages of one-dimensional(1D)oriented nanostructures in light-trapping and chargetransport make them competitive candidates in photovoltaic(PV)*** the emergence of perovskite solar cells(PSCs),1D nanostructured electron transport materials(ETMs)have drawn tremendous ***,the power conversion efficiencies(PCEs)of these devices have always significantly lagged behind their mesoscopic and planar ***-efficiency PSCs with 1D ETMs showing efficiency over 22%were just realized in the most recent *** yet lacks a comprehensive review covering the development of 1D ETMs and their application in *** hence timely summarize the advances in 1D ETMs-based solar cells,emphasizing on the fundamental and optimization issues of charge separation and collection ability,and their influence on PV *** sketching the classification and requirements for high-efficiency 1D nanostructured solar cells,we highlight the applicability of 1D TiO_(2)nanostructures in PSCs,including nanotubes,nanorods,nanocones,and nanopyramids,and carefully analyze how the electrostatic field affects cell *** kinds of oriented nanostructures,e.g.,ZnO and SnO_(2)ETMs,are also ***,we discuss the challenges and propose some potential strategies to further boost device *** review provides a broad range of valuable work in this fast-developing field,which we hope will stimulate research enthusiasm to push PSCs to an unprecedented level.

关键词： 1D nanostructures Perovskite solar cells Electron transport materials Electrostatic field High-efficiency

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Effects of electron-and hole-current hysteresis on trap characterization in organo-inorganic halide perovskite

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Journal of Energy Chemistry 2023年第1期76卷 414-420,I0010页

作者： Fan Wu Sally Mabrouk Miaomiao Han Yanhua Tong Tiansheng Zhang Yuchen Zhang Raja Sekhar Bobba quinn Qiao School of Science and Huzhou Key Lab of Materials for Energy Conversion and Storage Huzhou UniversityHuzhou 313000ZhejiangChina Mechanical and Aerospace Engineering Syracuse UniversitySyracuseNY13244United States

Charge trap density and carrier mobility of perovskite materials are the critical properties of perovskite solar *** space charge limited current(SCLC)method,which measures a dark current–voltage(I-V)curve of a single-carrier device has found extensive use for studying the trap density and charge carrier mobility in perovskite ***,it was found that the electron-and hole-current in organo-lead perovskite-based single-carrier device undergoes significant hysteresis under forward and reverse scanning due to the mobile *** addition,it was also observed that measuring history has a detrimental effect on hysteresis resulting in possible overestimation or underestimation of the extracted electrical values from the SCLC *** the forward/reverse scanning process,the mobile ionic defects enhance/shield the charge in the traps due to ionic charging/discharging,thereby increasing/reducing the interface barrier and net charge in the I-V scanning,which in turn affects the determination of transport properties of the *** results raise quite a few doubts over the direct application of classical SCLC measurements for the accurate characterization of intrinsic transport properties of the mixed ionicelectronic perovskite.

关键词： Organo-lead perovskite Ionic defects Space-charge-limited-current Trap density Mobility

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