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Relationship among Parkinson’s disease, constipation, microbes, and microbiological therapy

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World Journal of Gastroenterology 2024年第3期30卷 225-237页

作者： Xin-Yang Yuan Yu-Sen chen zhou Liu Department of Neurology Affiliated Hospital of Guangdong Medical UniversityZhanjiang 524000Guangdong ProvinceChina Institute of Neurology Guangdong Key Laboratory of Age-Related Cardiac and Cerebral DiseasesZhanjiang 524000Guangdong ProvinceChina

This comprehensive review elucidates the complex interplay between gut microbiota and constipation in Parkinson’s disease(PD),a prevalent non-motor symptom contributing significantly to patients’morbidity.A marked alteration in the gut microbiota,predominantly an increase in the abundance of Proteobacteria and Bacteroidetes,is observed in PD-related *** treatments,although safe,have failed to effectively alleviate symptoms,thereby necessitating the development of novel therapeutic *** interventions such as prebiotics,probiotics,and fecal microbiota transplantation(FMT)hold therapeutic *** prebiotics improve bowel movements,probiotics are effective in enhancing stool consistency and alleviating abdominal *** shows potential for significantly alleviating constipation symptoms by restoring gut microbiota balance in patients with *** promising developments,the causal relationship between changes in gut microbiota and PD-related constipation remains elusive,highlighting the need for further research in this expanding field.

关键词： Parkinson disease Constipation Gut microbiota Prebiotics Probiotics Fecal microbiota transplantation

Emerging mechanisms of non-alcoholic steatohepatitis and novel drug therapies

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Chinese Journal of Natural Medicines 2024年第8期22卷 724-745页

作者： chen Hao zhou Yang HAO Haiping XIONG Jing Department of Pharmacology School of PharmacyChina Pharmaceutical UniversityNanjing 210009China Jiangsu Provincial Key Laboratory of Drug Metabolism and Pharmacokinetics State Key Laboratory of Natural MedicinesChina Pharmaceutical UniversityNanjing 210009China

Non-alcoholic fatty liver disease(NAFLD)has become a leading cause of chronic liver disease *** initiates with simple steatosis(NAFL)and can progress to the more severe condition of non-alcoholic steatohepatitis(NASH).NASH often advances to end-stage liver diseases such as liver fibrosis,cirrhosis,and hepatocellular carcinoma(HCC).Notably,the transition from NASH to end-stage liver diseases is irreversible,and the precise mechanisms driving this progression are not yet fully ***,there is a critical need for the development of effective therapies to arrest or reverse this *** review provides a comprehensive overview of the pathogenesis of NASH,examines the current therapeutic targets and pharmacological treatments,and offers insights for future drug discovery and development strategies for NASH therapy.

关键词： Metabolic dysfunction Drug development Bile acids Liver-gut axis Inflammation Fibrosis

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Sodium metals for single emitter strong coupling:Alternative plasmonic candidates beyond noble metals

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Science China(Physics,Mechanics & Astronomy) 2024年第8期67卷 106-117页

作者： Yi Zhang Shuying chen Yuning Han Xiulai Xu Lin zhou National Laboratory of Solid State Microstructures Collaborative Innovation Center of Advanced MicrostructuresJiangsu Key Laboratory of Artificial Functional MaterialsCollege of Engineering and Applied SciencesNanjing UniversityNanjing 210008China School of Information and Electronic Engineering(Sussex Artificial Intelligence Institute) Zhejiang Gongshang UniversityHangzhou 310018China Department of Physics&Astronomy University College LondonLondon WC1E 6BTUK State Key Laboratory for Mesoscopic Physics and Frontiers Science Center for Nano-optoelectronics School of PhysicsPeking UniversityBeijing 100871China

This work provides a theoretical investigation into the strong coupling between a single quantum emitter(QE)and the surface plasmons of sodium metals in two representative plasmonic systems,i.e.,the semi-infinite metal-dielectric interface and the metal nanoparticles(NPs)of monomer/dimer *** both configurations,sodium metals exhibit distinctly stronger coupling strength and lower optical loss in the optical region than their noble metal counterparts,demonstrating the ideal candidate characteristics for single-molecule-level strong couplings with distinctly facile operation *** results provide new insights into extreme light-matter interactions with potential applications in quantum information,optical sensors,quantum chemistry,etc.

关键词： sodium metals plasmonics single quantum emitter strong coupling pseudomode

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MARS and RNAcmap3:The Master Database of All Possible RNA Sequences Integrated with RNAcmap for RNA Homology Search

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Genomics, Proteomics & Bioinformatics 2024年第1期22卷 143-150页

作者： Ke chen Thomas Litfin Jaswinder Singh Jian Zhan Yaoqi zhou Institute of Systems and Physical Biology Shenzhen Bay LaboratoryShenzhen 518055China Peking University Shenzhen Graduate School Shenzhen 518055China University of Science and Technology of China Hefei 230026China Suzhou Institute for Advanced Research University of Science and Technology of ChinaSuzhou 215123China Institute for Glycomics Griffith UniversitySouthportQLD 4222Australia

sequences found in the huge,integrated database of protein sequences(Big Fantastic Database).In contrast,the existing nucleotide databases were not consolidated to facilitate wider and deeper homology ***,we built a comprehensive database by incorporating the non-coding RNA(ncRNA)sequences from RNAcentral,the transcriptome assembly and metagenome assembly from metagenomics RAST(MG-RAST),the genomic sequences from Genome Warehouse(GWH),and the genomic sequences from MGnify,in addition to the nucleotide(nt)database and its subsets in National Center of Biotechnology Information(NCBI).The resulting Master database of All possible RNA sequences(MARS)is 20-fold larger than NCBI’s nt database or 60-fold larger than *** new dataset along with a new split-search strategy allows a substantial improvement in homology search over existing state-of-the-art *** also yields more accurate and more sensitive multiple sequence alignments(MSAs)than manually curated MSAs from Rfam for the majority of structured RNAs mapped to *** results indicate that MARS coupled with the fully automatic homology search tool RNAcmap will be useful for improved structural and functional inference of ncRNAs and RNA language models based on *** is accessible at https://***/omix/release/OMIX003037,and RNAcmap3 is accessible at http://***/download/.

关键词： RNA sequence database Homology search Secondary structure MARS RNAcmap3

Multi-Strategy Assisted Multi-Objective Whale Optimization Algorithm for Feature Selection

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Computer Modeling in Engineering & Sciences 2024年第8期140卷 1563-1593页

作者： Deng Yang Chong zhou Xuemeng Wei Zhikun chen Zheng Zhang School of Information Engineering Hebei GEO UniversityShijiazhuang050031China Faculty of Science University of AlbertaEdmontonT2N1N4Canada College of Resources and Environment Beibu Gulf UniversityQinzhou535011China Clinical Laboratory The Frist Hospital of Hebei Medical UniversityShijiazhuang050000China

In classification problems,datasets often contain a large amount of features,but not all of them are relevant for accurate *** fact,irrelevant features may even hinder classification *** selection aims to alleviate this issue by minimizing the number of features in the subset while simultaneously minimizing the classification error ***-objective optimization approaches employ an evaluation function designed as an aggregate function with a parameter,but the results obtained depend on the value of the *** eliminate this parameter’s influence,the problem can be reformulated as a multi-objective optimization *** Whale Optimization Algorithm(WOA)is widely used in optimization problems because of its simplicity and easy *** this paper,we propose a multi-strategy assisted multi-objective WOA(MSMOWOA)to address feature *** enhance the algorithm’s search ability,we integrate multiple strategies such as Levy flight,Grey Wolf Optimizer,and adaptive mutation into ***,we utilize an external repository to store non-dominant solution sets and grid technology is used to maintain *** on fourteen University of California Irvine(UCI)datasets demonstrate that our proposed method effectively removes redundant features and improves classification *** source code can be accessed from the website:https://***/zc0315/MSMOWOA.

关键词： Multi-objective optimization whale optimization algorithm multi-strategy feature selection

Cross-Dimension Attentive Feature Fusion Network for Unsupervised Time-Series Anomaly Detection

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Computer Modeling in Engineering & Sciences 2024年第6期139卷 3011-3027页

作者： Rui Wang Yao zhou Guangchun Luo Peng chen Dezhong Peng School of Computer Science and Engineering University of Electronic Science and Technology of ChinaChengdu611731China School of Computer and Software Engineering Xihua UniversityChengdu610039China School of Computer Science Sichuan UniversityChengdu610065China National Innovation Center for UHD Video Technology Chengdu610095China

Time series anomaly detection is crucial in various industrial applications to identify unusual behaviors within the time series *** to the challenges associated with annotating anomaly events,time series reconstruction has become a prevalent approach for unsupervised anomaly ***,effectively learning representations and achieving accurate detection results remain challenging due to the intricate temporal patterns and dependencies in real-world time *** this paper,we propose a cross-dimension attentive feature fusion network for time series anomaly detection,referred to as ***,a series and feature mixing block is introduced to learn representations in 1D ***,a fast Fourier transform is employed to convert the time series into 2D space,providing the capability for 2D feature ***,a cross-dimension attentive feature fusion mechanism is designed that adaptively integrates features across different dimensions for anomaly *** results on real-world time series datasets demonstrate that CAFFN performs better than other competing methods in time series anomaly detection.

关键词： Time series anomaly detection unsupervised feature learning feature fusion

High precision patternable liquid metal based conductor and adhesive substrate enabled stretchable hybrid systems

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Nano Research 2024年第6期17卷 5595-5603页

作者： Runhui zhou Jiaoya Huang Zemin Li Yushu Wang Ziyu chen Caofeng Pan CAS Center for Excellence in Nanoscience Beijing Key Laboratory of Micro-nano Energy and SensorBeijing Institute of Nanoenergy and NanosystemsChinese Academy of SciencesBeijing 101400China School of Nanoscience and Engineering University of Chinese Academy of SciencesBeijing 100049China Center on Nanoenergy Research School of Physical Science and TechnologyGuangxi UniversityNanning 530004China Institute of Atomic Manufacturing Beihang UniversityBeijing 100191China

Stretchable hybrid systems have been attracting tremendous attention for their essential role in soft robotics,on-skin electronics,and implantable *** rigid and soft functional modules are typically required in those ***,ensuring stable electrical contact between rigid and soft modules is a vital ***,we propose a simple,universal,and scalable strategy for the stretchable hybrid system through a highly precise printable liquid metal particle-based conductor and adhesive fluorine rubber *** properties of liquid metal particle-based conductors could be easily tuned to realize high-precision patterning,large-scale printing,and the ability to print on various ***,the fluorine rubber substrate could form strong interfacial adhesion with various components and materials through simply pressing and heating,hence enabling stable electrical ***,we prepared a stretchable hybrid light-emitting diode(LED)display system and employed it in on-skin visualization of pressure levels,which perfectly combined rigid and soft modules,thus demonstrating the promising potential applications in complex multifunctional stretchable hybrid systems for emerging technologies.

关键词： stretchable hybrid systems liquid metal high precision interfacial adhesion

Impact of EnKF assimilating Himawari-8 all-sky infrared radiance on the forecasting of a warm-sector rainstorm event

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Science China Earth Sciences 2024年第10期67卷 3110-3127页

作者： Shanshan LOU Lei ZHU Xuexing QIU Guangzhou chen Song YUAN Shengnan zhou Anhui Meteorological Observatory Hefei 230031China Key Laboratory of Meteorological Disaster Ministry of Education(KLME)Collaborative Innovation Center on Forecast and Evaluation of Meteorological Disasters(CIC-FEMD)Joint International Research Laboratory of Climate and Environment Change(ILCEC)Nanjing University of Information Science&TechnologyNanjing 210044China Huaihe River Basin Meteorological Center Hefei 230031China Shouxian National Climatology Observatory Huaihe River Basin Typical Farm Eco-Meteorological Experiment Field of CMAShouxian National Comprehensive Meteorological Observation Special Experimental OutfieldShouxian 232200China Anhui Province Key Laboratory of Atmospheric Science and Satellite Remote Sensing Hefei 230031China

Warm-sector rainstorms are highly localized events, with weather systems and triggering mechanisms are not obvious,leading to limited forecasting capabilities in numerical models. Based on the ensemble Kalman filter(PSU-En KF) assimilation system and the regional mesoscale model WRF, this study conducted a simulation experiment assimilating all-sky infrared(IR)radiance for a warm-sector rainstorm in East China and investigated the positive impact of assimilating the Himawari-8 moisture channel all-sky IR radiance on the forecast of the rainstorm. Results indicate that hourly cycling assimilation of all-sky IR radiance can significantly improve the forecast accuracy of this warm-sector rainstorm. There is a notable increase in the Threat Score(TS), with the simulated location and intensity of the 3-hour precipitation aligning more closely with observations. These improvements result from the assimilation of cloud-affected radiance, which introduces more mesoscale convective information into the model's initial fields. The adjustments include enhancements to the moisture field, such as increased humidity and moisture transport, and modifications to the wind field, including the intrusion of mid-level cold air and the strengthening of lowlevel convergent shear. These factors are critical in improving the forecast of this warm-sector rainstorm event.

关键词： Ensemble Kalman filter WRF model Himawari-8 All-sky radiance Warm-sector rainstorm

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Asymmetric radical allylation of β-keto esters with vinyl cyclopropanes by dual photoredox/nickel catalysis

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Science China Chemistry 2024年第11期67卷 3807-3816页

作者： Wen-Yuan Qu Xue-Song zhou Wen-Jing Xiao Jia-Rong chen Engineering Research Center of Photoenergy Utilization for Pollution Control and Carbon Reduction Ministry of EducationCollege of Chemistry Central China Normal University Wuhan Institute of Photochemistry and Technology Key Laboratory of Organo-Pharmaceutical Chemistry of Jiangxi Province Gannan Normal University

Radical-involved allylation reactions have emerged as a powerful platform for construction of carbon-carbon and carbonheteroatom bonds, facilitating the strategic incorporation of diverse allyl moieties. Nevertheless, this burgeoning field still faces ongoing challenges, including limitations of radical precursors and coupling partners, and difficulties in achieving enantiocontrol. Herein, we report for the first time a highly enantioselective radical allylation involving β-keto esters with vinyl cyclopropanes utilizing a synergistic dual photoredox/nickel catalysis under visible light irradiation. The mild and redox-neutral catalytic protocol demonstrates an extensive substrate compatibility and good functional tolerance, providing access to enantioenriched β-keto esters featuring quaternary α-stereocenter with good yields and high enantioselectivities. Preliminary mechanistic studies have uncovered that the success of the reaction hinges on the dual roles of nickel catalyst, including in situ formation of photoredox sensitive substrate/Ni complex and the ensuing asymmetric radical addition step.

关键词： asymmetric allylation photoredox catalysis radical addition nickel catalysis β-keto esters vinyl cyclopropanes