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Taxonomy and phylogeny of hyaline‑spored coelomycetes

Fungal Diversity 2020年第1期100卷 279-801页

作者： Wen‑Jing Li Eric H.C.McKenzie Jian‑Kui(Jack)Liu D.Jayarama Bhat Dong‑Qin Dai Erio Camporesi Qing Tian Sajeewa S.N.Maharachchikumbura Zong‑Long Luo Qiu‑Ju Shang Jin‑Feng Zhang narumo. tangthirasunun Samantha C.Karunarathna Jian‑Chu Xu Kevin D.Hyde Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Mushroom Research Foundation 128 M.3 Ban Pa Deng T.Pa PaeA.Mae TaengChiang Mai 50150Thailand Landcare Research Manaaki Whenua Private Bag 92170AucklandNew Zealand School of Life Science and Technology University of Electronic Science and Technology of ChinaChengdu 611731People’s Republic of China No.128/1‑J Azad Cooperative Housing SocietyCurcaP.O.Goa VelhaGoa 403108India Center for Yunnan Plateau Biological Resources Protection and Utilization College of Biological Resource and Food EngineeringQujing Normal UniversityQujingYunnan 655011People’s Republic of China A.M.B.Gruppo Micologico Forlivese“Antonio Cicognani”Via Roma 18ForlìItaly A.M.B Circolo Micologico“Giovanni Carini” C.P.314BresciaItaly Societàper gli Studi Naturalistici della Romagna C.P.143BagnacavalloRAItaly College of Agriculture and Biological Sciences Dali UniversityDali 671003YunnanPeople’s Republic of China Department of Biology Faculty of ScienceKing Mongkut’s Institute of TechnologyLadkrabangChalongkrung Rd.Ladkrabang DistrictBangkok 10520Thailand

Coelomycete is a general term used for asexual fungi which produce conidia in fruiting bodies:pycnidial,acervular,cupulate,pycnothyria or stromatic *** group contains numerous plant pathogenic,saprobic and endophytic species associated with a wide range of ***,morphological characters and host associations have been used as criteria to identify and classify coelomycetes,and this has resulted in a poor understanding of their generic and species *** based taxonomic studies have provided a better outlook of the phylogenetic and evolutionary trends in ***,the present outcomes represent only a preliminary step towards the understanding of *** genera have not been revisited since they were first *** present study revises the classification of the hyaline-spored coelomycetes and provides a modern taxonomic framework based on both morphology and *** total,248 genera were investigated,of which less than 100 are known to have sequence ***-locus sequence data analyses of 28S nrDNA,18S nrDNA,ITS,RNA polymerase II second largest subunit(rpb2),and part of the translation elongation factor 1-alpha gene(tef1)andβ-tubulin(tub2)gene regions were *** a result,three new genera and 23 new species are *** addition,three new links between sexual and asexual genera are *** are 138 genera that lack sequence data,and these are treated as Ascomycota,genera incertae *** drawings and descriptions are provided based on the examination of types and fresh collections and on the literature.

关键词： 26 new taxa Ascomycota Asexual morphs Basidiomycota

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Taxonomy and phylogeny of dematiaceous coelomycetes

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Fungal Diversity 2016年第2期77卷 1-316页

作者： Nalin N.Wijayawardene Kevin D.Hyde Dhanushka N.Wanasinghe Moslem Papizadeh Ishani D.Goonasekara Erio Camporesi D.Jayarama Bhat Eric H.C.McKenzie Alan J.L.Phillips Paul Diederich Kazuaki Tanaka Wen Jing Li narumo. tangthirasunun Rungtiwa Phookamsak Dong-Qin Dai Asha J.Dissanayake Gothamie Weerakoon Sajeewa S.N.Maharachchikumbura Akira Hashimoto Misato Matsumura Ali HBahkali Yong Wang Department of Plant Pathology Agriculture CollegeGuizhou UniversityGuiyang 550025People’s Republic of China School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Center of Excellence in Fungal Research and School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of Sciences132 Lanhei RoadKunming 650201People’s Republic of China World Agroforestry Centre East and Central Asia132 Lanhei RoadKunming 650201YunnanPeople’s Republic of China Microorganisms Bank Iranian Biological Resource Center(IBRC)Academic Center for EducationCulture and Research(ACECR)TehranIran A.M.B.Gruppo Micologico Forlivese Antonio CicognaniVia Roma 18ForlìItaly A.M.B.Circolo Micologico Giovanni CariniC.P.314BresciaItaly Societàper gli Studi Naturalistici della Romagna C.P.144BagnacavalloRAItaly No.128/1-J Azad Housing SocietyCurcaP.O.Goa Velha 403108India Department of Botany Goa UniversityGoa 403206India Manaaki Whenua Landcare Research Private Bag 92170AucklandNew Zealand Faculty of Sciences Biosystems and Integrative Sciences Institute(BioISI)University of LisbonCampo Grande1749-016 LisbonPortugal Musée national d’histoire naturelle 25 rue MunsterL-2160 LuxembourgLuxembourg Faculty of Agriculture and Life Science Hirosaki University3 Bunkyo-choHirosakiAomori 036-8561Japan Laboratoire Interdisciplinaire des Energies de Demain(LIED) UniversitéParis Diderot5 rue Thomas-MannParis 75013France Guizhou Key Laboratory Agro-Bioengineering Guizhou UniversityGuiyangGuizhou 550025People’s Republic of China Center for Research and Development of Fine Chemicals of Guizhou University Guiyang 550025People’s Republic of China Scientific Affiliate Integrative Research CenterScience&EducationThe Field MuseumChicagoILUSA Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesXiaohe DistrictGuiyang CityGuizhou Province 550006People’s R

t Coelomycetous fungi are an artificial taxonomic group which produce conidia inside a cavity *** comprise about,1000 genera and 7000 species,which can be endophytic,pathogenic or *** classification of coelomycetes was previously based on morphology,such as the shape of conidiomata and mode of conidiogenesis,while it was treated as a distinct group *** based taxonomic studies has been used to accommodate asexual fungi in a natural classification system,resolve generic boundaries of polyphyletic genera and species complexes,as well as establish asexual-sexual ***,most of genera lack sequence data,thus,morphology based identification is still important when introducing new genera or *** this paper we illustrate,describe,and provide taxonomic notes for 235 dematiaceous coelomycetous genera,including five new genera ***,Didymellocamarosporium,Melanocamarosporium,Melnikia and *** analyses of combined sequence data are provided to show placements of dematiaceous coelomycetes in Dothideomycetes,Leotiomycetes and ***-hundred and fifty-two(65%)of genera have sequence data,thus,their taxonomic placement in a natural classification system,is listed as an ***,83 genera still lack sequence data,hence,they are treated as Ascomycota,genera incertae *** addition,separate analyses are provided where better taxonomic resolution is needed.

关键词： Asexual fungi Conidiogenesis Morphology Multi-gene analyses

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Fungal diversity notes 367-490:taxonomic and phylogenetic contributions to fungal taxa

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Fungal Diversity 2016年第5期80卷 1-270页

作者： Kevin D.Hyde Sinang Hongsanan Rajesh Jeewon D.Jayarama Bhat Eric H.C.McKenzie E.B.Gareth Jones Rungtiwa Phookamsak Hiran A.Ariyawansa Saranyaphat Boonmee Qi Zhao Faten Awad Abdel-Aziz Mohamed A.Abdel-Wahab Supharat Banmai Putarak Chomnunti Bao-Kai Cui Dinushani A.Daranagama Kanad Das Monika C.Dayarathne Nimali Ide Silva Asha J.Dissanayake Mingkwan Doilom Anusha H.Ekanayaka Tatiana Baptista Gibertoni Aristóteles Góes-Neto Shi-Ke Huang Subashini C.Jayasiri Ruvishika S.Jayawardena Sirinapa Konta Hyang Burm Lee Wen-Jing Li Chuan-Gen Lin Jian-Kui Liu Yong-Zhong Lu Zong-Long Luo Ishara S.Manawasinghe Patinjareveettil Manimohan Ausana Mapook Tuula Niskanen Chada Norphanphoun Moslem Papizadeh Rekhani H.Perera Chayanard Phukhamsakda Christian Richter AndréL.C.Mde A.Santiago E.Ricardo Drechsler-Santos Indunil C.Senanayake Kazuaki Tanaka T.M.D.S.Tennakoon Kasun M.Thambugala Qing Tian Saowaluck Tibpromma Benjarong Thongbai Alfredo Vizzini Dhanushka N.Wanasinghe Nalin N.Wijayawardene Hai-Xia Wu Jing Yang Xiang-Yu Zeng Huang Zhang Jin-Feng Zhang Timur S.Bulgakov Erio Camporesi Ali H.Bahkali Mohammad A.Amoozegar Lidia Silva Araujo-Neta Joseph F.Ammirati Abhishek Baghela R.P.Bhatt Dimitar Bojantchev Bart Buyck Gladstone Alves da Silva Catarina Letícia Ferreira de Lima Rafael JoséVilela de Oliveira Carlos Alberto Fragoso de Souza Yu-Cheng Dai Bálint Dima Tham Thi Duong Enrico Ercole Fernando Mafalda-Freire Aniket Ghosh Akira Hashimoto Sutakorn Kamolhan Ji-Chuan Kang Samantha C.Karunarathna Paul M.Kirk Ilkka Kytovuori Angela Lantieri Kare Liimatainen Zuo-Yi Liu Xing-Zhong Liu Robert Lücking Gianfranco Medardi Peter E.Mortimer Thi Thuong Thuong Nguyen Itthayakorn Promputtha K.N.Anil Raj Mateus A.Reck Saisamorn Lumyong Seyed Abolhassan Shahzadeh-Fazeli Marc Stadler Mohammad Reza Soudi Hong-Yan Su Takumasa Takahashi narumo. tangthirasunun Priyanka Uniyal Yong Wang Ting-Chi Wen Jian-Chu Xu Zhong-Kai Zhang Yong-Chang Zhao Jun-Liang Zhou Lin Zhu Institute of Biotechnology and Germplasm Resources Key Lab of Southwestern Crop Gene Resources and Germplasm Innovation Ministry of AgricultureYunnan Provincial Key Laboratory of Agricultural BiotechnologyYunnan Academy of Agricultural SciencesKunming 650223YunnanPeople’s Republic of China Key Laboratory of Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanPeople’s Republic of China Center of Excellence in Fungal Research Mae Fah Luang University333 M.1T.ThasudMuangChiang Rai 57100Thailand State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesNo 31st West Beichen RoadChaoyang DistrictBeijing 100101People’s Republic of China Department of Botany and Microbiology College of ScienceKing Saud UniversityP.O.Box:2455Riyadh1145Saudi Arabia Department of Botany and Microbiology Faculty of ScienceSohag UniversitySohag 82524Egypt Faculty of Agriculture and Life Sciences Hirosaki University3 Bunkyo-choHirosakiAomori 036-8561Japan The United Graduate School of Agricultural Sciences Iwate University18-8 Ueda 3 ChomeMorioka 020-8550Japan Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesXiaohe DistrictGuiyang CityGuizhou Province 550006People’s Republic of China School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Department of Plant Pathology College of AgricultureGuizhou UniversityGuiyang 550025GuizhouPeople’s Republic of China Department of Botany Goa UniversityTaleigãoGoaIndia No.128/1-J Azad Housing SocietyCurcaGoa Velha 403108India Department of Biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Centre of Mountain Ecosystem Studies Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanPeople’s Republic of China Department of Microbial Drugs Helmholtz Centre for Infection Res

This is a continuity of a series of taxonomic papers where materials are examined,described and novel combinations are proposed where necessary to improve our traditional species concepts and provide updates on their *** addition to extensive morphological descriptions and appropriate asexual and sexual connections,DNA sequence data are also analysed from concatenated datasets(rDNA,TEF-a,RBP2 and b-Tubulin)to infer phylogenetic relationships and substantiate systematic position of taxa within appropriate *** new species or combinations are being proposed,we apply an integrative approach(morphological and molecular data as well as ecological features wherever applicable).Notes on 125 fungal taxa are compiled in this paper,including eight new genera,101 new species,two new combinations,one neotype,four reference specimens,new host or distribution records for eight species and one alternative *** new genera introduced in this paper are Alloarthopyrenia,Arundellina,Camarosporioides,Neomassaria,Neomassarina,Neotruncatella,Paracapsulospora and *** new species are Alfaria spartii,Alloarthopyrenia italica,Anthostomella ravenna,***,Arthrinium paraphaeospermum,Arundellina typhae,Aspergillus koreanus,Asterina cynometrae,Bertiella ellipsoidea,Blastophorum aquaticum,Cainia globosa,Camarosporioides phragmitis,Ceramothyrium menglunense,Chaetosphaeronema achilleae,Chlamydotubeufia helicospora,Ciliochorella phanericola,Clavulinopsis aurantiaca,Colletotrichum insertae,Comoclathris italica,Coronophora myricoides,Cortinarius fulvescentoideus,***,***,***,Cunninghamella gigacellularis,Cyathus pyristriatus,Cytospora cotini,Dematiopleospora alliariae,***,Diaporthe aseana,***,Distoseptispora multiseptata,***,***,Dothiora buxi,Emericellopsis persica,Gloniopsis calami,Helicoma guttulatum,Helvella floriforma,***,Hermatomyces subiculosa,Ju

关键词： Ascomycota Basidiomycota Dothideomycetes Mortierellomycotina Mucoromycotina Pezizomycetes Phylogeny Taxonomy New genus New species New host records

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