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Small-Scale Mineralogical heterogeneity from Variations in Phase Assemblages in the Transition Zone and D" Layer Predicted by Convection Modelling

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Journal of Earth Science 2011年第2期22卷 160-168页

作者： Arie P van den Berg David A Yuen michael h g jacobs Maarten V de hoop Earth Sciences Department Utrecht University Department of geology and geophysics and Minnesota Supercomputing Institute University of MinnesotaMinneapolisMN 55415USA Institut für Metallurgie TU ClausthalClausthal-ZellerfeldGermany Department of Mathematics and Center of Applied and Computational Mathematics Purdue UniversityWest LafayetteINUSA

Small-scale heterogeneity in the deep mantle is concentrated in the upper-mantle transition zone （TZ）, in the depth range 410-660 km and also at the bottom 250 km D＂ region. This encourages a more detailed investigation of the potential for seismic reflectivity imaging by modelling heterogeneous structures in mantle convection models including phase transitions of the TZ and D＂ regions. We applied finite elements with variable spacing near the boundary layers in 2-D cylindrical geometry that allow for sufficient spatial resolution. We investigated several models including an extended Boussinesq （EBA） model, focused on the D＂ region, and a compressible （ALA） model for the TZ region. The results for the D＂ region show typical lens-shaped structures of post-perovskite （PPV） embedded in the perovskite （PV） background mantle, where the thickness of the lenses, at 200-400 km, strongly depends on the Clapeyron slope of the PV-PPV transition. A second phase transition （double crossing） occurs in case the core temperature is higher than the intercept temperature Ti. Our phase-dependent rheology results in contrasting effective viscosity between PV and PPV. Our model results reveal a distinctly clear mechanical weakening of the PPV lenses with about an order of magnitude lower viscosity. The shear wave-speed distributions computed from our convection results are strongly correlated with the heterogeneous distribution of the mineral phase. gradients in the seismic wave-speed that are the target of seismological reflectivity imaging are clearly revealed. The wave-speed results show a clear resolution of the top and bottom interfaces of the PPV lenses. Our ALA model for the TZ is based on a thermodynamical model for the magnesium end- member of an olivine-pyroxene mantle. The model predicts a much more complex distribution of mineral phases, compared to our D＂ results, in agreement with the greater number of mineral phases involved in the olivine-pyroxene phase diagram for the P

关键词： mantle convection phase transition post-perovskite mineralogical heterogeneity.

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Bayesian inference-based wear prediction method for plain bearings under stationary mixed-friction conditions

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Friction 2024年第6期12卷 1272-1282页

作者： Florian KÖNIg Florian WIRSINg georg jacobs Rui hE Zhigang TIAN Ming J.ZUO Institute for Machine Elements and Systems Engineering RWTH Aachen UniversityAachen 52062Germany Department of Mechanical Engineering University of AlbertaEdmonton T6G1H9Canada Qingdao International Academician Park Research Institute Qingdao 266000China

This study introduces a method to predict the remaining useful life(RUL)of plain bearings operating under stationary,wear-critical *** this method,the transient wear data of a coupled elastohydrodynamic lubrication(mixed-EhL)and wear simulation approach is used to parametrize a statistical,linear degradation *** method incorporates Bayesian inference to update the linear degradation model throughout the runtime and thereby consider the transient,system-dependent wear progression within the RUL prediction.A case study is used to show the suitability of the proposed *** results show that the method can be applied to three distinct types of post-wearing-in behavior:wearing-in with subsequent hydrodynamic,stationary wear,and progressive wear *** hydrodynamic operation leads to an infinite lifetime,the method is successfully applied to predict RUL in cases with stationary and progressive wear.

关键词： plain bearings wear modeling remaining useful life prediction Bayesian inference

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Reflections on four decades of physical activity epidemiology

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Journal of Sport and health Science 2024年第5期13卷 608-610页

作者： Barbara Sternfeld David R.jacobs Jr. Division of Research Kaiser Permanente Northern CaliforniaOaklandCA 94610USA Division of Epidemiology and Community health School of Public HealthUniversity of MinnesotaMinneapolisMN 55454USA

In 1985,Public health Reports published a series of papers prepared for a workshop sponsored by the Centers for Disease Control and Prevention(CDC).1 Building on the seminal work of Jeremy Morris and Ralph Paffenbarger Jr.,who were among the first to use epidemiological methods to study physical activity(PA),2,3 the workshop itself was the result of a growing scientific understanding of the importance of“physical fitness and exercise for improving the health of the public”.

关键词： semi workshop Ralph

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A brief history of the Compendium of Physical Activities

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Journal of Sport and health Science 2024年第1期13卷 3-5页

作者： Barbara E.Ainsworth Stephen D.herrmann David R.jacobs Jr. Melicia C.Whitt-glover Catrine Tudor-Locke School of Exercise and health Shanghai University of SportShanghai 200438China College of health Solutions Arizona State UniversityPhoenixAZ 85003USA Kansas Center for Metabolism and Obesity Research University of Kansas Medical CenterKansas CityKS 66160USA Division of Epidemiology and Community health University of MinnesotaMinneapolisMN 55455USA gramercy Research group KnightdaleNC 27545USA College of health and human Services University of North Carolina at CharlotteCharlotteNC 28223USA

The Compendium of Physical Activities(Compendium)was developed to address consistent assignment of physical activity(PA)intensity values used in PA epidemiology research of the association between PA and health outcomes.1The known protective effects of PA on incident health outcomes traces to the mid-1900s,with over 50 studies examining coronary heart disease(ChD)as the outcome of interest.

关键词： epidemiology Activities protective

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hepatic angiotensin-converting enzyme 2 expression in metabolic dysfunction-associated steatotic liver disease and in patients with fatal COVID-19

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World Journal of gastroenterology 2024年第31期30卷 3705-3716页

作者： Angus K jacobs Steven D Morley Kay Samuel Katie Morgan Lyndsey Boswell Timothy J Kendall David A Dorward Jonathan A Fallowfield Peter C hayes John N Plevris hepatology Laboratory University of EdinburghEdinburgh EH164SBUnited Kingdom Scottish National Blood Transfusion Service Jack Copland CentreEdinburgh EH144BEUnited Kingdom Institute for Regeneration and Repair University of EdinburghEdinburgh EH164UUUnited Kingdom Edinburgh Pathology University of EdinburghEdinburgh EH164SBUnited Kingdom

BACKgROUND Metabolic dysfunction-associated steatotic liver disease(MASLD),characterised by hepatic lipid accumulation,causes inflammation and oxidative stress accompanied by cell damage and *** injury(LI)is also frequently reported in patients hospitalised with coronavirus disease 2019(COVID-19),while preexisting MASLD increases the risk of LI and the development of COVID-19-associated *** of injury at the cellular level remain unclear,but it may be significant that severe acute respiratory syndrome coronavirus 2(SARS-CoV-2)which causes COVID-19,uses angiotensin-converting expression enzyme 2(ACE2),a key regulator of the‘anti-inflammatory’arm of the renin-angiotensin system,for viral attachment and host cell *** To determine if hepatic ACE2 levels are altered during progression of MASLD and in patients who died with severe *** ACE2 protein levels and localisation,and histological fibrosis and lipid droplet accumulation as markers of MASLD were determined in formalin-fixed liver tissue sections across the MASLD pathological spectrum(isolated hepatocellular steatosis,metabolic dysfunction-associated steatohepatitis(MASh)+/-fibrosis,end-stage cirrhosis)and in post-mortem tissues from patients who had died with severe COVID-19,using ACE2 immunohistochemistry and haematoxylin and eosin and picrosirius red staining of total collagen and lipid droplet areas,followed by quantification using machine learning-based image pixel *** ACE2 staining is primarily intracellular and concentrated in the cytoplasm of centrilobular hepatocytes and apical membranes of bile duct ***,ACE2 protein levels are elevated in non-fibrotic MASh compared to healthy controls but not in the progression to MASh with fibrosis and in ***2 protein levels and histological fibrosis are not associated,but ACE2 and liver lipid droplet content are significantly correlated across the MASLD *** A

关键词： Metabolic dysfunction-associated steatotic liver disease Angiotensin-converting enzyme 2 Immunohistochemistry COVID-19 COVID-19-associated cholangiopathy

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CD4^(+)T cells produce IFN-I to license cDC1s for induction of cytotoxic T-cell activity in human tumors

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Cellular & Molecular Immunology 2024年第4期21卷 374-392页

作者： Xin Lei Daniël C.de groot Marij J.P.Welters Tom de Wit Ellen Schrama hans van Eenennaam Saskia J.Santegoets Timo Oosenbrug Annemarthe van der Veen Joris L.Vos Charlotte L.Zuur Noel F.C.C.de Miranda heinz jacobs Sjoerd h.van der Burg Jannie Borst Yanling Xiao Department of Immunology Leiden University Medical CenterLeidenThe Netherlands Oncode Institute Leiden University Medical CenterLeidenThe Netherlands Department of Tumor Biology and Immunology The Netherlands Cancer InstituteAmsterdamThe Netherlands Department of Medical Oncology Oncode InstituteLeiden University Medical CenterLeidenThe Netherlands IMMIOS B.V. OssThe Netherlands Division of Medical Oncology The Netherlands Cancer InstituteAmsterdamThe Netherlands Department of Otorhinolaryngology Leiden University Medical Center LeidenThe Netherlands Department of Pathology Leiden University Medical CenterLeidenThe Netherlands

CD4^(+)T cells can"help"or"license" conventional type 1 dendritic cells(cDC1s)to induce CD8^(+)cytotoxic T lymphocyte(CTL)anticancer responses,as proven in mouse *** recently identified cDC1s with a transcriptomic imprint of CD4^(+)T-cell help,specifically in T-cell-infiltrated human cancers,and these cells were associated with a good prognosis and response to PD-1-targeting ***,we delineate the mechanism of cDC1 licensing by CD4^(+)T cells in *** CD4^(+)T cells produce IFNβvia the STINg pathway,which promotes MhC-I antigen(cross-)presentation by cDC1s and thereby improves their ability to induce CTL anticancer *** cooperation with CD40 ligand(L),IFNβalso optimizes the costimulatory and other functions of cDC1s required for CTL response ***-I-producing CD4^(+)T cells are present in diverse T-cell-infiltrated cancers and likely deliver“help”signals to CTLs locally,according to their transcriptomic profile and colocalization with“helped/licensed”cDCs and tumor-reactive CD8^(+)T *** agreement with this scenario,the presence of IFN-I-producing CD4^(+)T cells in the TME is associated with overall survival and the response to PD-1 checkpoint blockade in cancer patients.

关键词： CD4^(+)T-cell help cDC1 licensing IFN-I signaling CD40 costimulation (cross-)presentation CTL priming Tumor control

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2024 Adult Compendium of Physical Activities:A third update of the energy costs of human activities

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Journal of Sport and health Science 2024年第1期13卷 6-12页

作者： Stephen D.herrmann Erik A.Willis Barbara E.Ainsworth Tiago V.Barreira Mary hastert Chelsea L.Kracht John M.Schuna Jr. Zhenghui Cai Minghui Quan Catrine Tudor-Locke Melicia C.Whitt-glover David R. jacobs Jr. Kansas Center for Metabolism and Obesity Research University of Kansas Medical CenterKansas CityKS 66160USA Division of Physical Activity and Weight Management Department of Internal MedicineUniversity of Kansas Medical CenterKansas CityKS 66160USA Center for health Promotion and Disease Prevention University of North Carolina at Chapel HillChapel HillNC 27599USA College of health Solutions Arizona State UniversityPhoenixAZ 85003USA School of Exercise and health Shanghai University of SportShanghai 200438China Exercise Science Department Syracuse UniversitySyracuseNY 13244USA Clinical Sciences Division Pennington Biomedical Research CenterBaton RougeLA 70808USA School of Exercise and Sport Science Oregon State UniversityCorvallisOR 97331USA College of health and human Services University of North Carolina at CharlotteCharlotteNC 28223USA gramercy Research group KnightdaleNC 27545USA Division of Epidemiology and Community health School of Public HealthUniversity of MinnesotaMinneapolisMN 55454USA

Background:The Compendium of Physical Activities was published in 1993 to improve the comparability of energy expenditure values assigned to self-reported physical activity(PA)across *** original version was updated in 2000,and again in 2011,and has been widely used to support PA research,practice,and public health ***:This 2024 update was tailored for adults 19-59 years of age by removing data from those≥60 *** a systematic review and supplementary searches,we identified new activities and their associated measured metabolic equivalent(MET)values(using indirect calorimetry)published since *** replaced estimated METs with measured values when ***:We screened 32,173 abstracts and 1507 full-text papers and extracted 2356 PA energy expenditure values from 701 *** added303 new PAs and adjusted 176 existing MET values and descriptions to reflect the addition of new data and removal of METs for older *** added a Major heading(Video games).The 2024 Adult Compendium includes 1114 PAs(912 with measured and 202 with estimated values)across 22 Major ***:This comprehensive update and refinement led to the creation of The 2024 Adult Compendium,which has utility across research,public health,education,and healthcare domains,as well as in the development of consumer health *** new website with the complete lists of PAs and supporting resources is available at https://***.

关键词： Adults Energy expenditure Exercise MET Physical Activities

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Influence of lanthanum level and interactions with nitrogen source on early development of Juglans nigra

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Journal of Rare Earths 2009年第2期27卷 270-279页

作者： Nicodemus michael A Salifu K Francis jacobs Douglass F Department of Forestty and Natural Resources Hardwood Tree Improvement and Regeneration Center Purdue University West Lafayette IN 47907 USA

Rare earth elements have been used for 30 years in Chinese agriculture to improve growth and yield. Numerous scientific studies have shown improvements in physiology, mineral nutrition, and growth, though deleterious effects may also occur. Very few studies have been performed on woody species. We exponentially fertilized one-year old black walnut （Juglans nigra L.） seedlings with 0, 0.1, 1, 10, or 100 mg lanthanum （La） and 800 mg nitrogen （N） as NaNO3, （Nh4）2SO4, Nh4NO3, or no N. One month following final fertilization, growth, mineral nutrition, photosynthesis, chlorophyll, and nitrate reductase activity were assessed. Plants fertilized with the highest level of La had reduced fine root growth, concentrations of magnesium, calcium, nickel, and phosphorus, photosynthesis levels, and chlorophyll a content. Foliar La concentration showed an interaction effect, with three to four times greater concentration in plants fed at 100 mg La to those given 10 mg La for （Nh4）2SO4 and NhaNO3 treatments. The results suggested no beneficial effects of La addition at levels used in this study and interactions between N source and La levels did not have an important impact on the growth, mineral nutrition, or physiology of black walnut seedlings.

关键词： lanthanum nitrate reductase chlorophyll photosynthesis Jugians nigra rare earths

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Dryland agriculture and rangeland restoration priorities in Afghanistan

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Journal of Arid Land 2015年第3期7卷 391-402页

作者： michael J jacobs Catherine A SChLOEDER Philip D TANIMOTO Texas Agri Life Research Department of Ecosystem Science & Management2138TAMUCollege StationTX 77843-2138USA Oikos Services LLCFortineMT 59918USA Conservation Imaging Inc.AuburndaleMassachusetts 02466USA

Afghanistan is threatened by rangeland degradation.A quantitative visual analysis of google Earth Imagery was used to systematically locate,characterize and quantify the current extent of rangelands in Afghanistan degraded as a consequence of dryland *** data were used in conjunction with dryland agriculture locations to establish a climate envelope comprised by temperature and mean annual precipitation to create a geographical mask known to contain dryland *** this mask we created a grid of 100 km2 cells that we analyzed individually to access dryland agriculture *** limits to sustainable dryland agriculture and areas of high restoration priority were also assessed as was the distribution of rain-fed agriculture with respect to the location of traditional migration routes for extensive livestock *** extents of agriculture in Afghanistan,at both upper and lower elevations,correlated most closely with mean annual temperature（MAT） at the upper elevation limits,and with mean annual precipitation（MAP） at the lower elevation *** total,dryland agriculture comprised 38,980 km2 of former native *** was highest in the northwestern,northern and northeastern provinces of herat,Badghis,Faryab,Jawzjan,Sar-e-Pul,Samangan,Balkh,Baghlan,Kunduz,Takhar and Badakhshan,with the highest percentage of conversion occurring in *** MAP value of 〈400 mm is perceived by farmers as the current climatic limit to sustainable dryland agriculture across the northern regions of the *** this MAP value,approximately 27,677 km2 of converted rangeland met the need for restoration *** projections indicate that Afghanistan will become warmer and drier in the coming *** consequence of this trend is that the MAP threshold of 〈400 mm to sustainable dryland agriculture will become obsolete in the coming *** of currently converted rangelands is needed to restore critical grazing area

关键词： degradation climatic trends extensive livestock production dryland agriculture rangeland restoration

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The Role of RNA Structure in Posttranscriptional Regulation of gene Expression

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Journal of genetics and genomics 2012年第10期39卷 535-543页

作者： Elina jacobs James D.Mills michael Janitz College of Science and Engineering University of EdinburghEdinburgh EH9 3JRUnited Kingdom School of Biotechnology and Biomolecular Sciences University of New South WalesSydney NSW 2052Australia

As more information is gathered on the mechanisms of transcription and translation, it is becoming apparent that these processes are highly regulated. The formation of mRNA secondary and tertiary structures is one such regulatory process that until recently it has not been analysed in depth. Formation of these mRNA structures has the potential to enhance and inhibit alternative splicing of transcripts, and regulate rates and amount of translation. As this regulatory mechanism potentially impacts at both the transcriptional and translational level, while also potentially utilising the vast array of non-coding RNAs, it warrants further investigation. Currently, a variety of high- throughput sequencing techniques including parallel analysis of RNA structure （PARS）, fragmentation sequencing （FragSeq） and selective 2-hydroxyl acylation analysed by primer extension （ShAPE） lead the way in the genome-wide identification and analysis of mRNA structure formation. These new sequencing techniques highlight the diversity and complexity of the transcriptome, and demonstrate another regulatory mechanism that could become a target for new therapeutic approaches.

关键词： Transcriptome mRNA structure Parallel analysis of RNA structure Fragmentation sequencing PARS FragSeq ShAPE-Seq

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