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A new oxidative pathway of nitric oxide production from oximes in plants

Molecular Plant 2024年第1期17卷 178-198页

作者： Pedro Lopez-gomez javier Buezo Marina Urra Alfonso Cornejo Raquel Esteban jorge Fernandez de los Reyes Estibaliz Urarte Estefania Rodriguez-Dobreva Alejandro Chamizo-Ampudia Alejandro Eguaras Sebastian Wolf Daniel Marino Victor Martinez-Merino jose F.Moran Institute for Multidisciplinary Research in Applied Biology(IMAB) Department of SciencesPublic University of Navarre(UPNA)Avda.de Pamplona 12331192 MutilvaSpain Institute for Advanced Materials and Mathematics(INAMAT2) Department of SciencesPublic University of Navarre(UPNA)Campus de Arosadia31006 PamplonaSpain Department of Plant Biology and Ecology University of the Basque Country(UPV/EHU)Sarriena s/nApdo.64448080 BilbaoSpain Center for Plant Molecular Biology(ZMBP) University of TubingenGeschwister-Scholl-Platz72074 TubingenGermany Institute of Natural Resources and Agrobiology of Salamanca(IRNASA) Department of Plant-Microorganism InteractionsSpanish National Research Council(CSIC)Cordel de Merinas40-5237008SalamancaSpain Department of Biochemistry Area of Molecular BiologyVeterinary FacultyUniversity of LeonCampus de Vegazanas/n.24071 LeonSpain

Nitric oxide(NO)is an essential reactive oxygen species and a signal molecule in *** several studies have proposed the occurrence of oxidative NO production,only reductive routes for NO production,such as the nitrate(NO_(3)^(-))-upper-reductase pathway,have been evidenced to date in land ***,plants grown axenically with ammonium as the sole source of nitrogen exhibit contents of nitrite and NO3−,evidencing the existence of a metabolic pathway for oxidative production of *** hypothesized that oximes,such as indole-3-acetaldoxime(IAOx),a precursor to indole-3-acetic acid,are intermediate oxidation products in NO *** detected the production of NO from IAOx and other oximes catalyzed by peroxidase(POD)enzyme using both 4-amino-5-methylamino-2′,7′-difluorescein fluorescence and *** stimulated the reaction,while superoxide dismutase inhibited ***,mouse NO synthase can also use IAOx to produce NO at a lower rate than *** provided a full mechanism for POD-dependent NO production from IAOx consistent with the experimental data and supported by density functional theory *** showed that the addition of IAOx to extracts from Medicago truncatula increased the in vitro production of NO,while in vivo supplementation of IAOx and other oximes increased the number of lateral roots,as shown for NO donors,and a more than 10-fold increase in IAOx dehydratase ***,we found that in vivo supplementation of IAOx increased NO production in Arabidopsis thaliana wild-type plants,while prx33-34 mutant plants,defective in POD33-34,had reduced *** data show that the release of NO by IAOx,as well as its auxinic effect,explain the superroot ***,our study reveals that plants produce NO utilizing diverse molecules such as oximes,POD,and flavins,which are widely distributed in the plant kingdom,thus introducing a long-awaited oxidative pathway to NO production in plants.T

关键词： ammonium oxidation auxin nitric oxide oxime peroxidase root phenotype

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Effects of yttria content on the CMAS infiltration resistance of yttria stabilized thermal barrier coatings system

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journal of Materials Science & Technology 2020年第8期36卷 74-83页

作者： juan jgomez Chavez Ravisankar Naraparaju Peter Mechnich Klemens Kelm Uwe Schulz C.V.Ramana University of Texas at El Paso Department of Mechanical EngineeringEl PasoTX79968USA German Aerospace Center(DLR) Institute of Materials ResearchCologne51170Germany

The effects of YO(1.5)doping in yttria-zirconia based thermal barrier coatings(TBCs)against CMAS interaction/infiltration are *** TBCs with an YO(1.5)content ranging from 43–67 mol.%(balance Zr O2)were produced by electron beam physical vapor deposition(EB-PVD)*** results reveal a trend of higher apatite formation probability with the higher free YO(1.5)available in the yttriazirconia ***,the infiltration resistance and amount of consumed coating appears to be strongly dependent on the YO(1.5)content in the *** thinnest reaction layer and lowest infiltration was found for the highest produced 67 YO(1.5)*** XRD experiments with volcanic ash/YO(1.5)powder mixtures with higher yttria contents than in the coatings(80 YO(1.5)and pure YO(1.5))also showed higher apatite formation with respect to increasing yttria *** threshold composition to promote apatite-based reaction products was found to be around 50 YO(1.5)in zirconia which was proved in the coatings and XRD powder *** YO(1.5)-ZrO2-Fe O-TiO2 bearing zirconolite-type phase was formed as a reaction product for all the coating compositions which implicates that TiO2 in the melt acts as a trigger for zirconolite *** phase could be detrimental for CMAS/volcanic ash infiltration resistance since it can be formed alongside with apatite which controls or limits the amount of Y^(3+)available for glass *** Fe rich garnet phase containing all the possible elements exhibited a slower nucleation compared to apatite and its growth was enhanced with slow cooling *** implications of phase stability and heat treatment effects on the reaction products are discussed for tests performed at 1250°C.

关键词： CMAS Volcanic ash Infiltration Electron beam physical vapor deposition Thermal barrier coating

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锗粉中接近于安德森局域化相变的红外散射和吸收

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石油石化节能 2002年第6期14卷 50-52页

作者： j.gomez Rivas 霍光利燕山大学外语学院

使用自由电子激光器进行强散射和反射测量。研究了散射特性和光学吸收的波长依赖性 ,结果表明 ,样品接近于安德森局域化相变 (kls≈ 3) ,但仍未达到。这与最近报道的在类似的较低折射率粒子粉末 (GaAs)中的强光子局域化 (kls<1)

关键词：电子激光器散射反射测量安德森局域化相变红外散射光学吸收

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Instability and sensitivity analysis of flows using OpenFOAM~

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Chinese journal of Aeronautics 2016年第2期29卷 316-325页

作者： Liu Qiong F. gomez j.M. Perez V. Theofilis School of Aeronautics Universidad PolitOcnica de Madrid Plaza Cardinal Cisneros 3 Madrid E-28040 Spain Department of Mechanical and Aerospace Engineering Monash University Victoria 3800 Australia

The present contributions deal with the development and implementation of the direct and adjoint incompressible Navie-Stokes equations in a matrix-free time-stepping context making use of the open-source OpenFOAM~ （open source field operation and manipulation） C ＋＋ tool- box. It is shown that a few minor modifications in the source code can enable these multi-purpose computational fluid dynamics （CFD） solvers to carry out global instability analysis of three- dimensional flows of engineering interest, exploiting all additional capabilities of such codes. The strength of this methodology is demonstrated through the analysis of an interesting selection of ooen and wall-bounded flows.

关键词： Adjoint-based analysis Computational fluid dynam-ics Flow instability OpenFOAM Time-stepping method

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Advances in scalable gas-phase manufacturing and processing of nanostructured solids： A review

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Particuology 2017年第1期15卷 15-39页

作者： Samir Salameh jesus gomez-Hernandez Aristeidis Goulas Hao Van Bui j. Ruud van Ommen Delft University ofTechnology Julianalaan 136 2628 BL Delft The Netherlands Carlos III University of Madrid Avda. de la Universidad 30 28911 Leganes Madrid Spain Delft IMP B.V. Mekelweg 2 2628 CD Delft The Netherlands

Although the gas-phase production of nanostructured solids has already been carried out in industry for decades, only in recentyears has research interest in this topic begun to increase. Nevertheless, despite the remarkable scientific progress made recently, many long-established processes are still used in industry. Scientific advancements can potentially lead to the improvement of existing industrial processes, but also to the development of completely new routes. This paper aims to review state-of-the-art synthesis and processing technologies, as well as the recent developments in academic research. Flame reactors that produce inorganic nanoparticles on industrial- and lab-scales are described, alongside a detailed overview of the different systems used for the production of carbon nanotubes and graphene. We discuss the problems of agglomeration and mixing of nanoparticles, which are strongly related to synthesis and processing. Finally, we focus on two promising processing techniques, namely nanoparticle fluidization and atomic layer deposition.

关键词： Nanoparticle synthesis Gas-phase process Nanoparticle fluidization Atomic layer deposition Agglomeration

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Erratum to:Influence of metal support in-plane symmetry on the corrugation of hexagonal boron nitride and graphene monolayers

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Nano Research 2019年第5期12卷 1217-1218页

作者： Antonio j.Martinez-Galera jose M.gomez-Rodriguez Departamento de Fisica de la Materia Condensada Universidad Autonoma de MadridMadrid E-28049Spain Condensed Matter Physics Center(IFIMAC) Universidad Autonoma de MadridMadrid E-28049Spain Instituto Nicolas Cabrera Universidad Autonoma de MadridMadrid E-28049Spain

The writings of the text on the last line,left column on the 4^th page and the text on lines 8^th,10^th,11^th and 16^th in the 4^th paragraph,left column and on lines from 1st to 8^th in the 1st paragraph,right column on the 5^th page,and the text on line 4^th in the 1^st paragraph,left column on the 9^th page,and Fig.3 and its caption on the 5^th page in the original version of this article were unfortunately incorrect.

关键词： corrugation hexagonal boron nitride graphene monolayers

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Alternative splicing enhances transcriptome complexity in desiccating seeds

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journal of Integrative Plant Biology 2016年第12期58卷 947-958页

作者： Arunkumar Srinivasan jose M. jimenez-gomez Fabio Fornara Wim j. j. Soppe Vittoria Brambilla Department of Plant Breeding and Genetics Max Planck Institute for Plant Breeding Research Cologne Germany Open Analytics Antwerp Belgium Institut jean-Pierre Bourgin Institut National de la Recherche Agronomique Versailles France University of Milan Department of Biosciences Milano 20133 Italy University of Milan Department of Agricultural and Environmental Sciences via Celoria 220133 Milano Italy

Before being dispersed in the environment, mature seeds need to be dehydrated. The survival of seeds after dispersal depends on their low hydration in combination with high desiccation tolerance. These characteristics are estab- lished during seed maturation. Some key seed maturation genes have been reported to be regulated by alternative splicing （AS）. However, so far AS was described only for single genes and a comprehensive analysis of AS during seed maturation has been lacking. We investigated gene expression and AS during Arabidopsis thaliana seed development at a global level, before and after desiccation. Bioinformatics tools were developed to identify differentially spliced regions within genes. Our data suggest the importance and shows the peculiar features of AS during seed desiccation. We identified AS in 347o of genes that are expressed at both timepoints before and after desiccation. Most of these AS transcript variants had not been found before in other tissues. Among the AS genes some seed master regulators could be found. Interestingly, 6% of all expressed transcripts were not transcriptionally regulated during desiccation, but only modified by AS. We propose that AS should be more routinely taken into account in the analysis of transcriptomic data to prevent overlooking potentially important regulators.

关键词： Alternative splicing Arabidopsis thaliana seed desiccation

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Folded MoS2 layers with reduced interlayer coupling

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Nano Research 2014年第4期7卷 572-578页

作者： Andres Castellanos-gomez Herre S. j. van der Zant Gary A. Steele Kavli Institute of Nanoscience Delft University of Technology 2528 CJ Delft The Netherlands

We study molybdenum disulfide （MoS2） structures generated by folding single-layer and bilayer MoS2 flakes. We find that this modified layer stacking leads to a decrease in the interlayer coupling and an enhancement of the photoluminescence emission yield. We additionally find that folded single-layer MoS2 structures show a contribution to photoluminescence spectra of both neutral and charged excitons, which is a characteristic feature of single-layer MoS2 that has not been observed in multilayer MoS2. The results presented here open the door to fabrication of multilayered MoS2 samples with high optical absorption while maintaining the advantageous enhanced photoluminescence emission of single-layer MoS2 by controllably twisting the MoS2 layers.

关键词： molybdenum disulfide(MoS2) folded MoS2 twisted MoS2 interlayer coupling Raman spectroscopy photoluminescence

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The N-formyl peptide receptors: contemporary roles in neuronal function and dysfunction

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Neural Regeneration Research 2020年第7期15卷 1191-1198页

作者： Peter j.G. Cussell Margarita gomez Escalada Nathaniel G.N. Milton Andrew W.j. Paterson Centre for Biomedical Science Research School of Clinical and Applied Sciences Leeds Beckett University

N-formyl peptide receptors(FPRs)were first identified upon phagocytic leukocytes,but more than four decades of research has unearthed a plethora of non-myeloid roles for this receptor *** are expressed within neuronal tissues and markedly in the central nervous system,where FPR interactions with endogenous ligands have been implicated in the pathophysiology of several neurodegenerative diseases including Alzheimer's disease and Parkinson's disease,as well as neurological cancers such as *** the homeostatic function of FPRs in the nervous system is currently undefined,a variety of novel physiological roles for this receptor family in the neuronal context have been posited in both human and animal *** developments in recent years have implicated FPRs in the process of neurogenesis and neuronal differentiation which,upon greater characterisation,could represent a novel pharmacological target for neuronal regeneration therapies that may be used in the treatment of brain/spinal cord injury,stroke and *** review aims to summarize the recent progress made to determine the physiological role of FPRs in a neuronal setting,and to put forward a case for FPRs as a novel pharmacological target for conditions of the nervous system,and for their potential to open the door to novel neuronal regeneration therapies.

关键词： Alzheimer's disease formyl peptide receptor neural regeneration neuroblastoma neurodegeneration neuroinflammation neuronal differentiation stroke

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The effect of the substrate on the Raman and photoluminescence emission of single-layer MoS2

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Nano Research 2014年第4期7卷 561-571页

作者： Michele Buscema Gary A. Steele Herre S. j. van der Zant &ndres Castellanos-gomez Kavli Institute of Nanoscience Delft University of Technology Lorentzweg 1 2628 CJ Delft The Netherlands

We quantitatively study the Raman and photoluminescence （PL） emission from single-layer molybdenum disulfide （MoS2） on dielectric （SiO2, hexagonal boron nitride, mica and the polymeric dielectric Gel-Film） and conducting substrates （Au and few-layer graphene）. We find that the substrate can affect the Raman and PL emission in a twofold manner. First, the absorption and emission intensities are strongly modulated by the constructive/destructive interference within the different substrates. Second, the position of the Alg Raman mode peak and the spectral weight between neutral and charged excitons in the PL spectra are modified by the substrate. We attribute this effect to substrate-induced changes in the doping level and in the decay rates of the excitonic transitions. Our results provide a method to quantitatively study the Raman and PL emission from MoSa-based vertical heterostructures and represent the first step in ad hoc tuning the PL emission of 1L MoS2 by selecting the proper substrate.

关键词： molybdenum disulfide van der Waalsheterostructures Raman microscopy photoluminescenceenhancement photoluminescencequenching substrate effect

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