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Super-Resolution Imaging of Mammograms Based on the Super-Resolution Convolutional Neural Network

Open Journal of Medical Imaging 2017年第4期7卷 180-195页

作者： Kensuke Umehara junko Ota Takayuki Ishida Department of Medical Physics and Engineering Graduate School of Medicine Osaka University Suita Japan

Purpose: To apply and evaluate a super-resolution scheme based on the super-resolution convolutional neural network (SRCNN) for enhancing image resolution in digital mammograms. Materials and Methods: A total of 711 mediolateral oblique (MLO) images including breast lesions were sampled from the Curated Breast Imaging Subset of the Digital Database for Screening Mammography (CBIS-DDSM). We first trained the super-resolution convolutional neural network (SRCNN), which is a deep-learning based super-resolution method. Using this trained SRCNN, high-resolution images were reconstructed from low-resolution images. We compared the image quality of the super-resolution method and that obtained using the linear interpolation methods (nearest neighbor and bilinear interpolations). To investigate the relationship between the image quality of the SRCNN-processed images and the clinical features of the mammographic lesions, we compared the image quality yielded by implementing the SRCNN, in terms of the breast density, the Breast Imaging-Reporting and Data System (BI-RADS) assessment, and the verified pathology information. For quantitative evaluation, peak signal-to-noise ratio (PSNR) and structural similarity (SSIM) were measured to assess the image restoration quality and the perceived image quality. Results: The super-resolution image quality yielded by the SRCNN was significantly higher than that obtained using linear interpolation methods (p p Conclusion: SRCNN can significantly outperform conventional interpolation methods for enhancing image resolution in digital mammography. SRCNN can significantly improve the image quality of magnified mammograms, especially in dense breasts, high-risk BI-RADS assessment groups, and pathology-verified malignant cases.

关键词： Super-Resolution Deep-Learning Artificial Intelligence Breast Imaging Reporting and Data System (BI-RADS) Mammography

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Reliability and Validity of the Chinese Version of the Survey of Family Environment (SFE)

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Open Journal of Nursing 2016年第9期6卷 820-832页

作者： junko Honda Naohiro Hohashi Sharron Kam Leung Division of Family Health Care Nursing Graduate School of Health Sciences Kobe University Kobe Japan School of Nursing Hong Kong Baptist Hospital Kowloon Hong Kong China

This study, in which 519 child-rearing families in Hong Kong participated, examined the reliability and validity of Chinese-language version of the Survey of Family Environment (SFE-C). The SFE-C is a self-administered questionnaire containing 30 items that examines family functioning and family support needs. It is designed to yield an instrument satisfaction score (SS score: family functioning score). Internal consistency was estimated at 0.92 (Cronbach’s alpha for SS scores). In a test-retest study of 33 families, the correlation coefficient for families’ mean SS score over a two-week period was 0.93, indicating high test-retest reliability. Confirmatory and exploratory factor analysis using the Concentric Sphere Family Environment Theory indicated that the SFE-C’s structure included seven factors, thereby supporting the SFE-C’s construct validity. The SFE-C demonstrates good reliability and validity and may be used to evaluate Chinese families’ functioning.

关键词： Survey of Family Environment (SFE) Chinese Instrument Development Family Functioning Concentric Sphere Family Environment Theory (CSFET)

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Depressed-type (0-IIc) colorectal neoplasm in patients with family history of first-degree relatives with colorectal cancer:A cross-sectional study

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World Journal of Gastroenterology 2006年第19期12卷 3082-3087页

作者： junko Iwasaki Yasushi Sano Kuang-I Fu Ai Machida Tatsuya Okuno Hikaru Kuwamura Takayuki Yoshino Kiyomi Mera Shigeharu Kato Atsushi Ohtsu Shigeaki Yoshida Takahiro Fujii Division of Digestive Endoscopy and Gastrointestinal Oncology National Cancer Center Hospital East ChibaJapan TF Clinic Tokyo Japan

AIM： TO investigate the correlation of depressed-type （0-IIc） colorectal neoplasm and family history of firstdegree relatives （FDR） with colorectal cancer （CRC）. METHODS： This cross-sectional study was conducted from June 2000 to October 2002 at National Cancer Center Hospital East. Eligible patients undergoing initial total colonoscopy were surveyed regarding family history of CRC among FDR by a questionnaire prior to colonoscopic examinations. All endoscopic findings during colonoscopy were recorded and the macroscopic classification of the early stage neoplasm/cancer was classified into two types （0-IIc vs non 0-IIc）. Odds ratios （OR） and 95% confidence intervals （CI） were calculated by univariate and multivariate logistic regression to estimate the association between macroscopic features and clinicopathological data including gender, age, and family history of FDR with CRC. RESULTS： The OR of an association between family history of FDR with CRC and overall early stage neoplasm adjusted by gender and age was 1.85 （95% CI： 1.31-2.61, P = 0.0004）, that for non 0-IIc neoplasm was 1.71 （95% CI： 1.22-2.41, P = 0.0017） and for 0-IIc colorectal neoplasm was 2.78 （95% CI： 1.49-5.16, P = 0.0031）. CONCLUSION： Our study shows a significant association between a family history of FDR with CRC and 0-IIc colorectal neoplasm. When patients with a family history of FDR with CRC undergo colonoscopy, colonoscopists should check carefully for not only polypoid, but also depressed-type （0-IIc） lesions.

关键词： Depressed-type Family history Colorecta cancer First-degree relative Colonoscopy

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Simple Simulation for COVID-19 in Wuhan, Hubei, China to Predict Outbreak in Wuhan, the Initial Case in Wuhan, and the Epidemic in Japan as of 11 February, 2020

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Journal of Biosciences and Medicines 2020年第6期8卷 56-61页

作者： junko Kurita Tamie Sugawara Yoshiyuki Sugishita Yasushi Ohkusa Department of Nursing Collage of Nursing Tokiwa University Ibaraki Japan Infectious Disease Surveillance Center National Institute of Infectious Diseases Tokyo Japan

Object: Prediction of the COVID-19 epidemic represents a matter of concern not only for public health or medicine but also for Earth’s general population. This study predicts outbreaks in Wuhan and in Japan as of 11 February, 2020.Method: We applied a simple SIR model to data published by Hubei public health authorities. Moreover, into the model, we incorporate mild and asymptomatic cases from experiences of Japanese residents of Wuhan up to the outbreak. Finally, we predict an outbreak in Japan based on 10,000 iterations of a simulation conducted under the assumption of infected people including mild cases visiting Japan according to the estimated distribution of patients in Wuhan since the date on which the initial case occurred to the date when travel from Wuhan to Japan was suspended. Results: Results suggest the basic reproduction number, R0, as 2.84;its 95% confidence interval (CI) was [2.35, 3.33]. The peak is estimated to be reached on March 11. Its 95% CI peak date is 29 February to 27 March. The 95% CI peak date in Japan is 26 April to 2 May. The greatest number of patients at the peak with severe symptoms was estimated as 858.3 thousand. Discussion and Conclusion: Our obtained R0 of 2.84 approximates an earlier estimate. We predicted the greatest number of patients at the peak with severe symptoms as 858.3 thousand in Japan. This number is 63% greater than the highest daily peak of influenza.

关键词： COVID-19 Outbreak in Japan SIR Model Prediction Mild Case Asymptomatic Case

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Random forest machine learning models for interpretable X-ray absorption near-edge structure spectrum-property relationships

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npj Computational Materials 2020年第1期6卷 743-753页

作者： Steven B.Torrisi Matthew R.Carbone Brian A.Rohr Joseph H.Montoya Yang Ha junko Yano Santosh K.Suram Linda Hung Accelerated Materials Design and Discovery Toyota Research InstituteLos AltosCA 94022USA Department of Physics Harvard UniversityCambridgeMA 02138USA Department of Chemistry Columbia UniversityNew YorkNY 10027USA Advanced Light Source Lawrence Berkeley National LaboratoryBerkeleyCA 94720USA Molecular Biophysics and Integrated Bioimaging Division Lawrence Berkeley National LaboratoryBerkeleyCA 94720USA

X-ray absorption spectroscopy(XAS)produces a wealth of information about the local structure of materials,but interpretation of spectra often relies on easily accessible trends and prior assumptions about the ***,researchers have demonstrated that machine learning models can automate this process to predict the coordinating environments of absorbing atoms from their XAS ***,machine learning models are often difficult to interpret,making it challenging to determine when they are valid and whether they are consistent with physical *** this work,we present three main advances to the data-driven analysis of XAS spectra:we demonstrate the efficacy of random forests in solving two new property determination tasks(predicting Bader charge and mean nearest neighbor distance),we address how choices in data representation affect model interpretability and accuracy,and we show that multiscale featurization can elucidate the regions and trends in spectra that encode various local properties.

关键词： property structure spectrum

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Discovery of unique African Helicobacter pylori CagAmultimerization motif in the Dominican Republic

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World Journal of Gastroenterology 2020年第45期26卷 7118-7130页

作者： Takaaki Ono Modesto Cruz Hiroyuki Nagashima Phawinee Subsomwong junko Akada Takashi Matsumoto Tomohisa Uchida Rumiko Suzuki Celso Hosking Jose A Jimenez Abreu Yoshio Yamaoka Department of Environmental and Preventive Medicine Oita University Faculty of MedicineYufu 879-5593Japan Criminal Investigation Laboratory Oita Prefectural Police HeadquartersOita 870-1117Japan Institute of Microbiology and Parasitology IMPAFaculty of ScienceAutonomous University of Santo DomingoSanto Domingo 10103Dominican Republic Department of Biomedical Research National Institute of Medicine and Diagnostic ImagingSanto Domingo 10107Dominican Republic Department of Gastroenterology Hokkaido Cancer CenterSapporo 003-0804Japan Department of Molecular Pathology Oita University Faculty of MedicineYufu 879-5593Japan Dominican-Japanese Digestive Disease Center Dr Luis E.Aybar Health and Hygiene CitySanto Domingo 10302Dominican Republic Department of Medicine Gastroenterology and Hepatology SectionBaylor College of MedicineHoustonTX 77030United States

BACKGROUND Helicobacter pylori(***)colonizes the human stomach and is a major cause of peptic ulcer disease and gastric ***,although the prevalence of *** is high in Africa,the incidence of gastric cancer is low,and this phenomenon is called to be African *** CagA protein produced by *** is the most studied virulence *** carcinogenic potential of CagA is associated with the Glu-Pro-Ile-Tyr-Ala(EPIYA)patterns and CagAmultimerization(CM)*** To better understand the EPIYA patterns and CM motifs of the cagA *** Gastric mucosal biopsy specimens were obtained from 258 patients with dyspepsia living in the Dominican Republic,from which 120 *** strains were *** the bacterial DNA extraction,the EPIYA pattern and CM motif genotypes were determined using a polymerase chain reaction-based *** population structure of the Dominican Republic strains was analyzed using multilocus sequence typing(MLST).Peptic ulcer disease and gastric cancer were identified via endoscopy,and gastric cancer was confirmed by *** scores of the gastric mucosa were evaluated using the updated Sydney *** All CagA-positive strains carried the Western-type CagA according to the identified EPIYA ***-seven kinds of CM motifs were *** the typical Western CM motif(FPLKRHDKVDDLSKVG)was observed most frequently,the typical East Asian CM motif(FPLRRSAAVNDLSKVG)was not ***,“FPLRRSAKVEDLSKVG”,similar to the typical East Asian CM motif,was found in 21 *** this type was significantly more frequent in strains classified as hpAfrica1 using MLST analysis(P=0.034),we termed it Africa1-CM(Af1-CM).A few hpEurope strains carried the Af1-CM motif,but they had a significantly higher ancestral Africa1 component than that of those without the Af1-CM motif(P=0.030).In 30 cagA-positive strains,the"GKDKGPE"motif was observed immediately upstream of the EPIYA motif in

关键词： Helicobacter pylori CagA CagA 3'region CagA-multimerization motif Glu-Pro-Ile-Tyr-Ala motif Dominican Republic

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Application of Sparse-Coding Super-Resolution to 16-Bit DICOM Images for Improving the Image Resolution in MRI

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Open Journal of Medical Imaging 2017年第4期7卷 144-155页

作者： junko Ota Kensuke Umehara Naoki Ishimaru Takayuki Ishida Department of Medical Physics and Engineering Graduate School of Medicine Osaka University Suita Japan

Purpose: To improve the image resolution of magnetic resonance imaging (MRI), conventional interpolation methods are commonly used to magnify images via various image processing approaches;however, these methods tend to produce artifacts. While super-resolution (SR) schemes have been introduced as an alternative approach to apply medical imaging, previous studies applied SR only to medical images in 8-bit image format. This study aimed to evaluate the effectiveness of sparse-coding super-resolution (ScSR) for improving the image quality of reconstructed high-resolution MR images in 16-bit digital imaging and communications in medicine (DICOM) image format. Materials and Methods: Fifty-nine T1-weighted images (T1), 84 T2-weighted images (T2), 85 fluid attenuated inversion recovery (FLAIR) images, and 30 diffusion-weighted images (DWI) were sampled from The Repository of Molecular Brain Neoplasia Data as testing datasets, and 1307 non-medical images were sampled from the McGill Calibrated Color Image Database as a training dataset. We first trained the ScSR to prepare dictionaries, in which the relationship between low- and high-resolution images was learned. Using these dictionaries, a high-resolution image was reconstructed from a 16-bit DICOM low-resolution image downscaled from the original test image. We compared the image quality of ScSR and 4 interpolation methods (nearest neighbor, bilinear, bicubic, and Lanczos interpolations). For quantitative evaluation, we measured the peak signal-to-noise ratio (PSNR) and structural similarity (SSIM). Results: The PSNRs and SSIMs for the ScSR were significantly higher than those of the interpolation methods for all 4 MRI sequences (PSNR: p p Conclusion: ScSR provides significantly higher image quality in terms of enhancing the resolution of MR images (T1, T2, FLAIR, and DWI) in 16-bit DICOM format compared to the interpolation methods.

关键词： Super-Resolution Sparse-coding Super-Resolution (ScSR) MRI DICOM 16-Bit

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Effects of Cold Atmospheric Pressure Plasma on Accelerating Acute Wound Healing: A Comparative Study among 4 Different Treatment Groups

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Modern Plastic Surgery 2019年第1期9卷 18-31页

作者： Akio Nishijima Takahiro Fujimoto Takamichi Hirata junko Nishijima Department of Medical Engineering Faculty of Engineering Tokyo City University Tokyo Japan Department of Plastic and Reconstructive Surgery University of Tsukuba Ibaraki Japan Clinic F Tokyo Japan

Cold atmospheric pressure plasma (CAP) has been expected to be effective for wound healing among plasma medicines and has been attracting attention. The aim of this retrospective clinical study was to evaluate and compare the effects of CAP on acute wounds created by a fractional CO2 (FXCO2) laser on four treatment groups. Methods: This study was conducted between September 2017 and November 2018. Radiated surface wounds were created using a FXCO2 laser on four identically-sized regions on the medial side of the left forearm of 12 healthy volunteer subjects, for a total of 48 treatment regions. Each region was then randomly assigned to one of four groups: 1) no treatment (control group), 2) irradiated CAP for 60 seconds (plasma group), 3) topical application of ointment containing betamethasone valerate (steroid group), or 4) two to three sprays of basic fibroblast growth factor (bFGF group). The primary outcome of the skin was the change in absolute values of lightness index (L*), redness index (a*I) of L*a*b color space, arithmetical mean roughness (Ra), and mean melanin concentration. The secondary outcome was the clinical condition of the wounds, including inflammation, crust formation, and hyper/hypo-pigmentation on the recovering skin surface relative to the surrounding intact skin. Each item was evaluated at post-treatment 0, 1, 3, 7, 14, 28 days and 1 year. Results: Although no significant difference was observed among all groups, the CAP group exhibited more rapid recovery regarding a*I and Ra. No side-effects were observed in the CAP group. Conclusion: CAP is considered to accelerate healing of irradiated wounds via anti-inflammatory activity. Our study confirmed the effectiveness and safety of CAP which is devoid of side-effects of conventional therapies, and may aid in future development of medical plasma therapies.

关键词： Cold Atmospheric Pressure Plasma Plasma Medicine New Energy Device Wound Healing Skin Activation

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Factors Affecting the Perception of Family Functioning among Couples in Child-Rearing Japanese Families

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Open Journal of Nursing 2015年第5期5卷 407-415页

作者： junko Honda Yuuri Nakai Shota Kakazu Naohiro Hohashi Division of Family Health Care Nursing Department of Nursing Graduate School of Health Sciences Kobe University Hyogo Japan Department of Nursing Faculty of Health Sciences School of Medicine Kobe University Hyogo Japan

In family healthcare nursing, the family system unit (i.e., a group in which the members, seen as a whole, mutually interact) is the target of care. As nurses tend to obtain family-related information from particular family members in the clinical setting, when assessing families, they often confront the issue of the differences between the theoretical level and methodological level. Although this issue needs resolving for evidence-based family nursing practice, sufficient research is lacking on the methodology related to family assessment. The present study aimed to clarify the factors that affected evaluation of family functioning among couples. Semi-structured interviews were conducted with 10 child-rearing families (couples) using the Survey of Family Environment (SFE) as a family functioning scale. Content analysis identified 12 factors that affected discrepancies in the couples’ evaluations and eight factors that affected agreement in those evaluations. These factors were classified into three categories: factors concerning family or family members;factors concerning questions related to the SFE;and factors concerning the view of the family as a whole. The results of this study should contribute to the development of family assessment tools and effective methods for evaluation of family care.

关键词： Family Functioning Discrepancy Survey of Family Environment (SFE) Japan Concentric Sphere Family Environment Theory (CSFET)

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Centrilobular necrosis in acute presentation of Japanese patients with type 1 autoimmune hepatitis

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World Journal of Hepatology 2012年第9期4卷 262-267页

作者： Kazumichi Abe Yukiko Kanno Ken Okai Fumiko Katsushima Kyoko Monoe Hironobu Saito Atsushi Takahashi junko Yokokawa Hiromasa Ohira Department of Gastroenterology and Rheumatology Fukushima Medical University School of Medicine1 HikarigaokaFukushima 960-1295Japan

AIM: To compare clinicopathological features of acute presentation of type 1 autoimmune hepatitis (AIH) with or without centrilobular necrosis (CN). METHODS: Our study comprised 41 patients with biopsy-proven acute presentation (acute exacerbation phase 36, acute hepatitis phase 5) of type 1 AIH at our hospital from 1975 to 2009. Elevated serum alanine aminotransferase (ALT) (> 5x upper limit of normal) identified acute presentation of the disease. We compared clinicopathological features of these AIH patients with or without CN. The data used for analysis included patient background (age, sex, type of disease, presence of complications with other autoimmune diseases, human leukocyte antigen, and International Autoimmune Hepatitis Group score), clinical parameters at presentation (ALT, alkaline phosphatase, IgG, anti-nuclear antibodies, and anti-smooth muscle antibodies), histology and therapy. RESULTS: CN was found in 13 (31.7%) patients with acute presentation (acute exacerbation phase 10, acute hepatitis phase 3) of AIH. Serum IgG levels of patients with CN were significantly lower than those of patients without CN (mean: 2307 mg/dL vs 3126 mg/dL, P < 0.05), while antinuclear antibody-negative rates were significantly higher (30.7% vs 3.5%, P < 0.05). However, other clinical features were similar between the two groups. The frequency of advanced fibrosis in patients with CN was significantly lower than in patients without CN (F0-2: 84.6% vs 35.7%, F3-4: 15.4% vs 64.3%, P < 0.05). Other histological features were similar between the two groups. Although there was no significant difference between groups when evaluated using the revised original score (12 vs 14), the simplified AIH score of patients with CN was significantly lower (6 vs 7, P < 0.05). Frequency of DR4 was similar between patients with and without CN. CONCLUSION: CN is observed in both Japanese patients with acute hepatitis phase and acute exacerbation phase of type 1 AIH, although AIH with CN often

关键词： Autoimmune hepatitis Centrilobular necrosis Acute presentation Acute exacerbation phase Acute hepatitis phase

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