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Species diversity,taxonomy and phylogeny of Polyporaceae(Basidiomycota)in China

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Fungal Diversity 2019年第4期97卷 137-392页

作者： Bao-Kai Cui Hai-Jiao Li Xing Ji jun-liang zhou Jie Song Jing Si Zhu-liang Yang Yu-Cheng Dai Institute of Microbiology Beijing Forestry UniversityBeijing 100083China Beijing advanced Innovation Center for Tree Breeding by Molecular Design Beijing Forestry UniversityBeijing 100083China National Institute of Occupational Health and Poison Control Chinese Center for Disease Control and PreventionBeijing 100050China Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesHeilongtanKunming 650201China

Polyporaceae is one of the most important families of *** on the species diversity,taxonomy and phylogeny of Polyporaceae in China are carried *** far 217 species belonging to 42 genera are reported from *** new genera:Amylosporia *** Murinicarpus ***.,twelve new species:Coriolopsis dendriformis ***.,*** ***.,Funalia cystidiata ***.,Haploporus microsporus ***.,Perenniporia citrinoalba ***.,*** ***.,Picipes hainanensis ***.,*** ***.,*** ***.,Trametes duplexa ***.,*** *** *** ***.,and six new combinations,Amylosporia hattorii ***.,Hornodermoporus latissimus ***.,Murinicarpus subadustus ***.,Picipes pumilus ***.,Vanderbylia delavayi *** Vanderbylia robiniophila ***.,are *** the species are described based on the Chinese *** to genera of Polyporaceae occurring in China and keys to species of each genus are *** monograph provides a revised classification of Polyporaceae in China according to the modern *** phylogeny of Polyporaceae from China are reconstructed based on DNA sequences of multiple loci including the internal transcribed spacer(ITS)regions,the large subunit nuclear ribosomal RNA gene(nLSU),the small subunit nuclear ribosomal RNA gene(nSSU),the small subunit mitochondrial rRNA gene sequences(mtSSU),the translation elongation factor 1-αgene(TEF1),theβ-tubulin gene(TBB1),the RNA polymerase II largest subunit(RPB1)and second largest subunit(RPB2)*** addition,full morphological descriptions,illustrations,color photographs,taxonomic notes,ecology and all the available sequences of Polyporaceae species found from China are provided.

关键词： Classification Multi-gene phylogeny Polypore Systematics White-rot fungi

Phototherapy: progress, challenges, and opportunities

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Science China Chemistry 2024年

作者： Xi Yuan jun-liang zhou Lin Yuan Jiangli Fan Juyoung Yoon Xiao-Bing Zhang Xiaojun Peng Weihong Tan Department of Laboratory Medicine Zhongnan Hospital of Wuhan University Molecular Science and Biomedicine Laboratory (MBL) State Key Laboratory of Chemo/Biosensing and Chemometrics College of Chemistry and Chemical Engineering Aptamer Engineering Center of Hunan Province Hunan University Wuhan University Shenzhen Research Institute State Key Laboratory of Fine Chemicals Frontier Science Center for Smart Materials Dalian University of Technology Department of Chemistry and Nanoscience Ewha Womans University

Phototherapy has emerged as a promising modality in modern medicine, attracting significant attention due to its non-invasiveness, exceptional spatiotemporal controllability, and reduced side effects. Advanced technologies have been developed in phototherapy, encompassing three main approaches: photodynamic therapy, photothermal therapy, and photoactivatable prodrug-based therapy. In this review, we present photosensitizers, photothermal agents, and photoactivatable prodrugs, along with photo-responsive carriers used in therapy. Subsequently, we discuss the advantages of phototherapy in combating cancer,infections, and other diseases. Additionally, we highlight the benefits of combining phototherapy with other treatments, as single-mode therapeutic modalities often fail to achieve satisfactory efficiency. Finally, we address the current challenges in developing effective phototherapy agents, particularly regarding their clinical applications. We believe that advancements in phototherapy will promote non-invasive theranostic techniques for clinical studies.

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Towards standardizing taxonomic ranks using divergence times-a case study for reconstruction of the Agaricus taxonomic system

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Fungal Diversity 2016年第3期78卷 239-292页

作者： Rui-Lin Zhao jun-liang zhou Jie Chen Simona Margaritescu Santiago Sánchez-Ramírez Kevin D Hyde Philippe Callac Luis A.Parra Guo-Jie Li Jean-Marc Moncalvo State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesBeijing 100101China Institute of Microbiology and Beijing Key Laboratory for Forest Pest Control Beijing Forestry UniversityBeijing 100083China Center of Excellence in Fungal Research Mae Fah LuangUniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Department of Natural History Royal Ontario MuseumTorontoON M5S 2C6Canada Department of Ecology and Evolutionary Biology University of TorontoTorontoON M5S 3B2Canada Key Laboratory of Economic Plants and Biotechnology Kunming Institute of BotanyChinese Academy of Sciences132 Lanhei RoadKunming 650201China INRA-UR1264 Mycologie et Sécuritédes AlimentsCS 2003233882 Villenave d’Ornon cedexFrance Avda.Padre Claret n°7 5°G09400 Aranda de DueroBurgosSpain

The recognition of taxonomic ranks in the Linnean classification system is largely *** authors have proposed the use of divergence time as a universally standardized ***(Agaricaceae,Agaricales)is a mushroom genus that contains many species of high commercial *** studies using ITS sequence data discovered 11 new phylogenetic lineages within the genus,however their taxonomic ranks were uncertain due to the lack of criteria to define them within traditional *** this study,we analyzed ITS sequence data from 745 collections(nearly 600 being newly generated)including 86 from type specimens of previously recognized subgenera and *** monophyletic groups were recognized,but most basal relationships were *** hundred and fourteen representatives of the identified ITS clades were selected in order to produce a multi-gene phylogeny based on combined LSU,tef-1α,and rpb2 sequence *** times within the multi-gene phylogeny were estimated using BEAST *** on phylogenetic relationships and with respect to morphology,we propose a revised taxonomic system for Agaricus that considers divergence time as a standardized criterion for establishing taxonomic *** propose to segregate Agaricus into five subgenera and 20 *** Pseudochitonia is substantially emended;circumscription of the subgenera Agaricus and Flavoagaricus is restricted to taxa of sections Agaricus and Arvenses,respectively;and two new subgenera(Minores and Spissicaules)are *** Pseudochitonia,sections Bivelares,Brunneopicti,Chitonioides,Nigrobrunnescentes,Sanguinolenti and Xanthodermatei are maintained,but the latter two are reduced because we raise subsection Bohusia to sectional rank and a clade within section Xanthodermatei is formally introduced as section Hondenses;and sections Rubricosi,Crassispori,Flocculenti,and Amoeni are *** Laeticolores is placed in the subgenus Minores and sections Rarolen

关键词： Agaricaceae Divergence times Multi-gene phylogenetics Systematics Taxonomy

A six-gene phylogenetic overview of Basidiomycota and allied phyla with estimated divergence times of higher taxa and a phyloproteomics perspective

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Fungal Diversity 2017年第3期84卷 43-74页

作者： Rui-Lin Zhao Guo-Jie Li Santiago Sanchez-Ramirez Matt Stata Zhu-liang Yang Gang Wu Yu-Cheng Dai Shuang-Hui He Bao-Kai Cui jun-liang zhou Fang Wu Mao-Qiang He Jean-Marc Moncalvo Kevin D.Hyde State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesChaoyang DistrictBeijing 100101China College of Life Sciences University of Chinese Academy of SciencesHuairou DistrictBeijing 100408China Department of Ecology and Evolutionary Biology University of TorontoTorontoON M5S 3B2Canada Department of Natural History Royal Ontario MuseumTorontoON M5S 2C6Canada Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanChina Institute of Microbiology and Beijing Key Laboratory for Forest Pest Control Beijing Forestry UniversityBeijing 100083China Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Key Laboratory of Economic Plants and Biotechnology Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanChina

In this paper,we provide a phylogenetic overview of Basidiomycota and related phyla in relation to ten years of DNA based phylogenetic studies since the AFTOL publications in *** selected 529 species to address phylogenetic relationships of higher-level taxa using a maximumlikelihood framework and sequence data from six genes traditionally used in fungal molecular systematics(nrLSU,nrSSU,5.8S,tef1-a,rpb1 and rpb2).These species represent 18 classes,62 orders,183 families,and 392 genera from the phyla Basidiomycota(including the newly recognized subphylum Wallemiomycotina)and Entorrhizomycota,and 13 species representing 13 classes of Ascomycota as outgroup *** also conducted a molecular dating analysis based on these six genes for 116 species representing 17 classes and 54 orders of Basidiomycota and *** we performed a phyloproteomics analysis from 109 Basidiomycota species and 6 outgroup taxa using amino-acid sequences retrieved from 396 orthologous *** of higher taxa follows the criteria in Zhao et al(Fungal Divers 78:239–292,2016):(i)taxa must be monophyletic and statistically well-supported in molecular dating analyses,(ii)their respective stem ages should be roughly equivalent,and(iii)stem ages of higher taxa must be older than those of lower level *** time-tree indicates that the mean of stem ages of Basidiomycota and Entorrhizomycota are ca.530 Ma;subphyla of Basidiomycota are 406–490 Ma;most classes are 358–393 Ma for those of Agaricomycotina and 245–356 Ma for those of Pucciniomycotina and Ustilaginomycotina;most orders of those subphyla split 120–290 *** of most higherlevel taxa of Basidiomycota are generally supported,especially those taxa introduced in the recent ten years:phylum Entorrhizomycota,classes Malasseziomycetes,Moniliellomycetes,Spiculogloeomycetes,Tritirachiomycetes and orders Amylocorticiales,Golubeviales,Holtermanniales,Jaapiales,Lepidostromatales,Robbauerales,Stereopsidales and Tricho

关键词： Fungi Systematics Taxonomy Wallemiomycotina

Test for the effects of three surfactants on the penetration ability of the calcium chloride and water glass Solutions in dust

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Journal of Environmental Sciences 1998年第4期10卷 62-68页

作者： Wu Chao, Chen jun liang, zhou Bo, Wang Ping long Department of Resources Exploitation Engineering, Central South University of Technology, Changsha 410083, China

By using a downward penetration testing device, a large number of experiments were made to investigate the effects of surfactants (sodium succinate, sodium dodecyl sulfonate and dodecyl benzene sulfonic acid sodium salt) on the penetration ability of the calcium chloride and water glass solutions in four dust samples. The experimental results showed that the surfactants can enhance the penetration ability and decrease the surface tension of the calcium chloride and water glass solutions in great extent. After adding the surfactants in 0.2—0.6 wt.% to the solutions of calcium chloride and water glass in 5—25 wt.% respectively, the largest percent of penetration ability increases to 28% more. Among the three surfactants, the size of their effects on the penetration ability of calcium chloride and water solutions in the dust samples is dodecyl benzene sulfonic acid sodium salt, sodium dodecyl sulfonate and sodium *** achieved conclusions are great significant for calcium chloride and water glass to be applied in the field of soil stabilization and raising dust control.

关键词： calcium chloride water glass surfactants penetration ability dust.

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Prognosis of R1-resection at the bronchial stump in patients with non-small cell lung cancer

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Chinese Medical Journal 2014年第16期127卷 2918-2923页

作者： Lyu Jima Hao Xuezhi Hui zhouguang liang jun zhou Zongmei Feng Qinfu Xiao Zefen Chen Dongfu Zhang Hongxing Wang Lyuhua Cancer Institute and Hospital Chinese Academy of Medical SciencesBeijing 100021 China

Background The prognosis of R1-resection at the bronchial stump in patients with non-small cell lung cancer （NSCLC） remains *** study intends to identify the prognostic factors and to optimize treatments for these patients under update *** The data of 124 NSCLC patients who underwent R1-resection at the bronchial stump was *** were 41 patients in the surgery group （S）,21 in the postoperative radiotherapy （PORT） group （S＋R）,30 in the postoperative chemotherapy （POCT） group （S＋C）,and 32 in the PORT plus POCT group （S＋R＋C）.The constitute proportion in different groups was tested using the X2 method,univariate analysis was performed using the Kaplan-Meier and log-rank method,and multivariate analysis was done using the Cox hazard regression with entry factors including age,sex,pathological type and stage,classification of the residual disease,and treatment *** process was performed stepwise backward with a maximum iteration of 20 and an entry possibility of 0.05 as well as an excluded possibility of 0.10 at each *** In univariate analysis,survival was more favorable for patients with squamous cell carcinoma,early pathological T or N stage,and chemotherapy or *** was no significant difference in the survival for patients with different types of the residual disease,except for the difference between patients with carcinoma in situ and lymphangiosis carcinomatosa （P=0.030）.The survival for patients receiving chemoradiotherapy was superior to that for those undergoing surgery alone （P=0.016）.In multivariate analysis,the pathological type （HR 2.51,95% CI 1.59 to 3.96,P=0.000）,pathological T （HR 1.29,95% CI 1.04 to 1.60,P=-0.021） or N stage （HR 2.04,95% CI 1.40 to 2.98,P=0.000）,and chemotherapy （HR 0.24,95% CI 0.13 to 0.43,P=0.000） were independent prognostic *** Patients with squamous cell carcinoma,early pathological T or N stage,or receiving chemotherapy had a more favorable prognosis.

关键词： non-small cell lung cancer thoracic surgery prognosis drug therapy radiotherapy

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Tropic origins, a dispersal model for saprotrophic mushrooms in Agaricus section Minores with descriptions of sixteen new species

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Tropic origins, a dispersal model for saprotrophic mushrooms...

Electrolyte engineering for optimizing anode/electrolyte interface towards superior aqueous zinc-ion batteries:A review

中国菌物学会2018年学术年会

作者： Mao-Qiang He Jie Chen jun-liang zhou Cheewangkoon Ratchadawan Kevin D.Hyde Rui-Lin Zhao State key laboratory of Mycology Institute of MicrobiologyChinese Academy of Sciences Department of Entomology and Plant Pathology Faculty of AgricultureChiang Mai University Institute of Excellence in Fungal Research Mae Fah Luang University Institute of Microbiology and Beijing Key Laboratory for Forest Pest Control Beijing Forestry University College of Life Sciences University of Chinese Academy of Sciences

Agaricus section Minores contains the richest species diversity within the genus（Zhao et al. 2011,Zhao et al. 2016, Chen et al. 2017）. Its Phylogeny is firstly presented by a Maximum Likelihood tree generated through DNA sequences from four gene regions of 91 species. Furthermore, a molecular dating analysis is conducted used those sequences, and it provided the divergence times of the clades within section Minores. Study showed section Minores has a tropical origin. Four main dispersal routes are proposed:（1） species from South Asia migrated through the Tibetan Plateau and reached Europe ca. 9–13 Ma;（2） species from out of South Asia dispersed to Europe in the earlier time of ca. 22 Ma;（3） species from South Asia dispersed through North Asia to Alaska, and reached West America around ca. 9 Ma;and（4） species from South Asia dispersed south and reached Oceania by at least three invading events about ca. 9, 12 and 16–18 Ma respectively. Those routes excepting the second route coincide with those of ectomycorrhizal mushrooms（Matheny et al. 2009, Geml et al. 2012, Wilson et al. 2012）. To know whether the second route existed in the saprotrophic mushrooms requires further studies,and the fourth route may explain why the secotioid species occurring in Australia are morphologically similar but cluster in different phylogenetic clades. This study also demonstrates a great biodiversity of A. section Minores in China that sixteen new species and three new records are introduced.

关键词： Phylogeography BEAST Phylogeny Agaricaceae

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Transactions of Nonferrous Metals Society of China 2024年第10期34卷 3118-3150页

作者： Hua-ming YU Dong-ping CHEN Li-jin ZHANG Shao-zhen HUANG liang-jun zhou Gui-chao KUANG Wei-feng WEI Li-bao CHEN Yue-jiao CHEN State Key Laboratory of Powder Metallurgy Central South UniversityChangsha 410083China

Aqueous zinc-ion batteries(AZIBs) are promising candidates for the large-scale energy storage systems due to their high intrinsic safety,cost-effectiveness and environmental ***,issues such as dendrite growth,hydrogen evolution reaction,and interfacial passivation occurring at the anode/electrolyte interface(AEI) have hindered their practical *** a stable AEI plays a key role in regulating zinc deposition and improving the cycle life of *** fundamentals of AEI and the challenges faced by the Zn anode due to unstable interfaces are discussed.A comprehensive summary of electrolyte regulation strategies by electrolyte engineering to achieve a stable Zn anode is *** effectiveness evaluation techniques for stable AEI are also analyzed,including the interfacial chemistry and surface morphology evolution of the Zn ***,suggestions and perspectives for future research are offered about enabling a durable and stable AEI via electrolyte engineering,which may pave the way for developing high-performance AZIBs.

关键词： aqueous zinc-ion battery anode/electrolyte interface zinc anode aqueous electrolyte electrolyte engineering electrolyte additives

Traditional Chinese medicine in the treatment of Helicobacter pylorirelated gastritis:The mechanisms of signalling pathway regulations

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World Journal of Gastroenterology 2025年第3期31卷 11-28页

作者： Pei-Pei Zhang liang Li Hao-Yu Qu Guang-Yu Chen Meng-zhou Xie Yan-Kun Chen School of Traditional Chinese Medicine Hunan University of Chinese MedicineChangsha 410200Hunan ProvinceChina Hunan Engineering Technology Research Center for Medicinal and Functional Food Hunan University of Chinese MedicineChangsha 410200Hunan ProvinceChina Key Laboratory of Traditional Chinese Medicine Heart and Lung Syndrome Differentiation and Medicated Diet and Dietotherapy Hunan University of Chinese MedicineChangsha 410200Hunan ProvinceChina School of Informatics Hunan University of Chinese MedicineChangsha 410208Hunan ProvinceChina Precision Medicine Research and Development Center Zhuhai Institute of Advanced TechnologyChinese Academy of SciencesZhuhai 519000Guangdong ProvinceChina

Helicobacter pylori-associated gastritis(HPAG)is a common condition of the gastrointestinal ***,extensive and long-term antibiotic use has resulted in numerous adverse effects,including increased resistance,gastrointestinal dysfunction,and increased recurrence *** these concerns develop,traditional Chinese medicine(TCM)may have *** is based on the concept of completeness and aims to eliminate pathogens and strengthen the *** has the potential to prevent this condition while also boosting the rate of Helicobacter pylori *** review elaborates on the mechanism of TCM treatment for HPAG based on cellular signalling pathways,which reflects the flexibility of TCM in treating diseases and the advantages of multi-level,multipathway,and multi-target treatments for HPAG.

关键词： Helicobacter pylori Helicobacter pylori-associated gastritis Traditional Chinese medicine Signalling pathway Eliminate pathogens Strengthen the body