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Segment Anything for Comprehensive Analysis of Grapevine Cluster Architecture and Berry Properties

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Plant Phenomics 2024年第3期6卷 696-707页

作者： Efrain Torres-Lomas Jimena Lado-Bega Guillermo Garcia-Zamora luis diaz-Garcia Department of Viticulture and Enology University of California DavisDavisCA 95616USA Soil and Water Department Universidad de la RepublicaMontevideo 11400Uruguay

Grape cluster architecture and compactness are complex traits influencing disease susceptibility,fruit quality,and *** methods for these traits include visual scoring,manual methodologies,and computer vision,with the latter being the most scalable *** of the existing computer vision approaches for processing cluster images often rely on conventional segmentation or machine learning with extensive training and limited *** Segment Anything Model(SAM),a novel foundation model trained on a massive image dataset,enables automated object segmentation without additional *** study demonstrates out-of-the-box SAM's high accuracy in identifying individual berries in 2-dimensional(2D)cluster *** this model,we managed to segment approximately 3,500 cluster images,generating over 150,000 berry masks,each linked with spatial coordinates within their *** correlation between human-identified berries and SAM predictions was very strong(Pearson's r^(2)=0.96).Although the visible berry count in images typically underestimates the actual cluster berry count due to visibility issues,we demonstrated that this discrepancy could be adjusted using a linear regression model(adjusted R^(2)=0.87).We emphasized the critical importance of the angle at which the cluster is imaged,noting its substantial effect on berry counts and *** proposed different approaches in which berry location information facilitated the calculation of complex features related to cluster architecture and ***,we discussed SAM's potential integration into currently available pipelines for image generation and processing in vineyard conditions.

关键词： architecture analysis cluster anything berry comprehensive grapevine properties segment

Machine Learning-Based Radio Access Technology Selection in the Internet of Moving Things

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China Communications 2021年第7期18卷 13-24页

作者： Ramon Sanchez-Iborra luis Bernal-Escobedo jose Santa Dept.Engineering and Applied Techniques University Centre of Defence at the Spanish Air Force Academy30729 San JavierSpain Dept.Information and Communication Engineering University of Murcia30100 MurciaSpain Dept.of Electronics Computing Technology and ProjectsTechnical University of Cartagena30202 CartagenaSpain

The Internet of Moving Things(IoMT)takes a step further with respect to traditional static IoT *** this line,the integration of new eco-friendly mobility devices such as scooters or bicycles within the Cooperative-Intelligent Transportation Systems(C-ITS)and smart city ecosystems is crucial to provide novel *** this end,a range of communication technologies is available,such as cellular,vehicular WiFi or Low-Power Wide-Area Network(LPWAN);however,none of them can fully cover energy consumption and Quality of Service(QoS)***,we propose a Decision Support System(DSS),based on supervised Machine Learning(ML)classification,for selecting the most adequate transmission interface to send a certain message in a multi-Radio Access Technology(RAT)set *** ML algorithms have been explored taking into account computing and energy constraints of IoMT enddevices and traffic ***,a real implementation of a decision tree-based DSS for micro-controller units is presented and *** attained results demonstrate the validity of the proposal,saving energy in communication tasks as well as satisfying QoS requirements of certain urgent *** footprint of the real implementation on an Arduino Uno is 444 bytes and it can be executed in around 50µs.

关键词： internet of moving things multi-RAT CITS classification personal mobility

What Isat Stake in Comparing the Literatures?

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Journal of Foreign Languages and Cultures 2023年第1期7卷 53-64页

作者： jose luis Jobim Fluminense Federal University

This paper will present and discuss a few questions raised in David Damrosch's Comparing the Literatures:Literary Studies in a Global Age,a book that,divided into chapters based on some selected keywords,develops rele... 详细信息

关键词： comparative literature translation world literature trasnational literary experience linguistic imperialism

North-South Comparatism:New Worldism,Theories of Lack and Acclimatization

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Journal of Foreign Languages and Cultures 2022年第1期6卷 26-37,155页

作者： jose luis Jobim Federal Fluminense University

In this essay I will use the expression New Worldism to refer to a particular representation of the New World,developed in Europe.I will take some theories related to this expression(theories of lack and acclimatization)to provide a short introduction to them,taking into special consideration their connection to comparatism as it was developed in 19th-century Brazil.

关键词： North-South Comparatism New Worldism theories of lack theoriesof acclimatization

Risk-based method to secure power systems against cyberphysical faults with cascading impacts: a system protection scheme application

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Journal of Modern Power Systems and Clean Energy 2018年第5期6卷 930-943页

作者： jose luis CALVO Simon H.TINDEMANS Goran STRBAC Department of Electrical and Electronic Engineering Imperial College London Department of Electrical Sustainable Energy Delft University of Technology

The utilization levels of the transmission network can be enhanced by the use of automated protection schemes that rapidly respond to disturbances. However,such corrective systems may suffer from malfunctions that have the potential to exacerbate the impact of the disturbance. This paper addresses the challenge of jointly optimizing the dispatch of generators and protection settings in this context. This requires a holistic assessment of the cyber(protection logic) and physical(network) systems,considering the failures in each part and their *** protection schemes are used as a prototypical example of such a system. An iterative optimization method is proposed that relies on power system response simulations in order to perform detailed impact assessments and compare candidate solutions. The candidate solutions are generated on the basis of a security-constrained dispatch that also secures the system against a set of cyber failure modes. A case study is developed for a generation rejection scheme on the IEEE reliability testsystem(RTS): candidate solutions are produced based on a mixed integer linear programming optimisation model, and loss-of-load costs are computed using a basic cascading outage algorithm. It is shown that the partial security approach is able to identify solutions that provide a good balance of operational costs and loss-of-load risks, both in a fixed dispatch and variable dispatch context.

关键词： Power system operations Cyber-physical systems Reliability System protection schemes Riskaware dispatch

Unraveling the interaction between soil microbiomes and their potential for restoring polluted soils

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Frontiers of Environmental Science & Engineering 2024年第8期18卷 149-151页

作者： Carlos O.Lomeli-Ortega Mingming Sun jose luis Balcazar Catalan Institute for Water Research(ICRA-CERCA) Girona 17003Spain University of Girona Girona 17004Spain Soil Ecology Laboratory College of Resources and Environmental SciencesNanjing Agricultural UniversityNanjing 210095China

Soils are not exempt from anthropogenic pollution,which can eventually cause disturbance of the microbial communities and areas without any kind of *** soil microbiota,bacteria play an important role in pollutant degradation,enabling them to thrive in contaminated *** this,several techniques have been used to increase the number of pollutantdegrading bacteria in situ or for subsequent ***,bacteriophages exhibit a high tolerance to pollutants and enhance bacterial metabolic activity through phage-encoded auxiliary metabolic genes(AMGs),thereby augmenting their skills for nutrient assimilation,resistance to phage infection,antibiotic resistance,heavy metal resistance,and degradation of pesticides and xenobiotics,among *** phage-encoded AMGs have been described during the last few years,but their diversity,distribution,and function have not been extensively explored,warranting further ***,we highlight soil microbiome interactions,especially bacterium and phage interactions to understand this unexplored world with a high potential for restoring polluted soils.

关键词： Auxiliary metabolic genes Microbiome Pollutants Soils Viruses

Modulation of immunity and inflammatory gene expression in the gut, in inflammatory diseases of the gut and in the liver by probiotics

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World Journal of Gastroenterology 2014年第42期20卷 15632-15649页

作者： Julio Plaza-diaz Carolina Gomez-Llorente luis Fontana Angel Gil Department of Biochemistry and Molecular Biology Ⅱ School of Pharmacy and Institute of Nutrition and Food Technology "Jose Mataix" Biomedical Research Center University of Granada

The potential for the positive manipulation of the gut microbiome through the introduction of beneficial microbes, as also known as probiotics, is currently an active area of investigation. The FAO/WHO define probiotics as live microorganisms that confer a health benefit to the host when administered in adequate amounts. However, dead bacteria and bacterial molecular components may also exhibit probiotic properties. The results of clinical studies have demonstrated the clinical potential of probiotics in many pathologies, such as allergic diseases, diarrhea, inflammatory bowel disease and viral infection. Several mechanisms have been proposed to explain the beneficial effects of probiotics, most of which involve gene expression regulation in specific tissues, particularly the intestine and liver. Therefore, the modulation of gene expression mediated by probiotics is an important issue that warrants further investigation. In the present paper, we performed a systematic review of the probiotic-mediated modulation of gene expression that is associated with the immune system and inflammation. Between January 1990 to February 2014, PubMed was searched for articles that were published in English using the MeSH terms “probiotics' and 'gene expression' combined with “intestines', 'liver', 'enterocytes', 'antigen-presenting cells', 'dendritic cells', 'immune system', and 'inflammation'. Two hundred and five original articles matching these criteria were initially selected, although only those articles that included specific gene expression results (77) were later considered for this review and separated into three major topics: the regulation of immunity and inflammatory gene expression in the gut, in inflammatory diseases of the gut and in the liver. Particular strains of Bifidobacteria, Lactobacilli, Escherichia coli, Propionibacterium, Bacillus and Saccharomyces influence the gene expression of mucins, Toll-like receptors, caspases, nuclear factor-κ

关键词： Gene expression Immunity Immunotolerance Inflammation Microbiota Probiotics Gut Liver

Ergodic switching control for diffusion-type processes

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Probability, Uncertainty and Quantitative Risk 2023年第1期8卷 53-74页

作者： jose-luis Menaldi Maurice Robin Department of Mathematics Wayne State UniversityDetroitMI 48202USA Fondation Campus Paris-Saclay 91190 Saint-AubinFrance

We consider the control of the diserete component n_(t)of a owitching Markov proceaa x_(t)=(z_(t),n_(t))when there ia a running cost and an immediate coat c(i,j)for owitching n_(t)from i to *** satudy the minimization of the ergodic(or long-term average)total ***,this paper trento the cnce where,for n_(t)=n fixed,z_(t)ia a reflected diffusion or a reflected diffusion with jumps,nt being,for fixed z,a continuous-time Markov *** the vanishing discount appronch,we exctend existing reoulta dealing with the situation where nt evolvea only by the switching control action and the diffusion is ***,we solve the ergodic problem for a claso of diffusiono which can be degenerate and for an example with aboorbing atate.

关键词： Markov–Feller processes Information constraints Switching control Impulse control Control by interventions Ergodic control

Breeding to Optimize Agriculture in a Changing World

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The Crop Journal 2015年第3期3卷 169-173页

作者： Jiankang Wang jose luis Araus Jianmin Wan Institute of Crop Science Chinese Academy of Agricultural Sciences Department of Plant Biology University of Barcelona

Breeding to Optimize Chinese Agriculture(OPTICHINA) was a three-year EU–China project launched in June of 2011. As designed, the project acted as a new strategic model to reinforce systematic cooperation on agricultural research between Europe and China. The OPTICHINA International Conference "Breeding to Optimize Agriculture in a Changing World" was held in Beijing, May 26–29, 2014. The conference included six thematic areas:(1) defining and protecting the yield potential of traits and genes;(2) high-throughput precision phenotyping in the field;(3) molecular technologies in modern breeding;(4) plant ideotype;(5) data analysis,data management, and bioinformatics; and(6) national challenges and opportunities for China. The 10 articles collected in this special issue represent key contributions and topics of this conference. This editorial provides a brief introduction to the OPTICHINA project, followed by the main scientific points of articles published in this special issue. Finally, outcomes from a brainstorming discussion at the end of the conference are summarized, representing the authors' opinions on trends in breeding for a changing world.

关键词： Bioinformatics Breeding Genetic analysis Modeling Molecular breeding Precision phenotyping