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Analyzing the genomic and transcriptomic architecture of milk traits in Murciano-Granadina goats

Journal of Animal Science and Biotechnology 2020年第3期11卷 649-666页

作者： Dailu Guan Vincenzo landi María Gracia Luigi-Sierra Juan Vicente delgado Xavier Such Anna Castelló Betlem Cabrera Emilio Mármol-Sánchez Javier Fernández-Alvarez joséluis ruiz de la torre casañas Amparo Martínez Jordi Jordana Marcel Amills Centre for Research in Agricultural Genomics(CRAG) CSIC-IRTA-UAB-UBUniversitat Autònoma de Barcelona08193 BellaterraSpain departamento de Genética Universidad de Córdoba14071 CórdobaSpain departament de Ciència Animal i dels Aliments Facultat de VeterinàriaUniversitat Autònoma de Barcelona08193 BellaterraSpain Asociación Nacional de Criadores de Caprino de Raza Murciano-Granadina(CAPRIGRAN) 18340 GranadaSpain Servei de Granges i Camps Experimentals Universitat Autònoma de Barcelona08193 BellaterraSpain

Background:In this study,we aimed to investigate the molecular basis of lactation as well as to identify the genetic factors that influence milk yield and composition in *** achieve these two goals,we have analyzed how the mRNA profile of the mammary gland changes in seven Murciano-Granadina goats at each of three different time points,i.e.78 d(T1,early lactation),216 d(T2,late lactation)and 285 d(T3,dry period)after ***,we have performed a genome-wide association study(GWAS)for seven dairy traits recorded in the 1st lactation of 822 Murciano-Granadina ***:The expression profiles of the mammary gland in the early(T1)and late(T2)lactation were quite similar(42 differentially expressed genes),while strong transcriptomic differences(more than one thousand differentially expressed genes)were observed between the lactating(T1/T2)and non-lactating(T3)mammary glands.A large number of differentially expressed genes were involved in pathways related with the biosynthesis of amino acids,cholesterol,triglycerides and steroids as well as with glycerophospholipid metabolism,adipocytokine signaling,lipid binding,regulation of ion transmembrane transport,calcium ion binding,metalloendopeptidase activity and complement and coagulation *** regard to the second goal of the study,the performance of the GWAS allowed us to detect 24 quantitative trait loci(QTLs),including three genome-wide significant associations:QTL1(chromosome 2,130.72-131.01 Mb)for lactose percentage,QTL6(chromosome 6,78.90-93.48 Mb)for protein percentage and QTL17(chromosome 17,11.20 Mb)for both protein and dry matter ***,QTL6 shows positional coincidence with the casein genes,which encode 80%of milk ***:The abrogation of lactation involves dramatic changes in the expression of genes participating in a broad array of physiological processes such as protein,lipid and carbohydrate metabolism,calcium homeostasis,cell death and tissue remo

关键词： Casein genes Dairy traits GWAS lactation QTLs RNA-Seq

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The Role of the Solar Cycle in the Relationship Between the North Atlantic Oscillation and Northern Hemisphere Surface Temperatures

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Advances in Atmospheric Sciences 2007年第2期24卷 191-198页

作者： laura de la torre luis GIMENO Juan Antonio AEL Raquel NIETO Universidad de Vigo Facultad de Ciencias de Ourense 32004OurenseSpain

The North Atlantic Oscillation （NAO） is one of the leading modes of climate variability in the Northern Hemisphere. It has been shown that it clearly relates to changes in meteorological variables, such as surface temperature, at hemispherical scales. However, recent studies have revealed that the NAO spatial pattern also depends upon solar forcing. Therefore, its effects on meteorological variables must vary depending upon this factor. Moreover, it could be that the Sun affects climate through variability patterns, a hypothesis that is the focus of this study. We find that the relationship between the NAO/AO and hemispheric temperature varies depending upon solar activity. The results show a positive significant correlation only when solar activity is high. Also, the results support the idea that solar activity influences tropospheric climate fluctuations in the Northern Hemisphere via the fluctuations of the stratospheric polar vortex .

关键词： solar activity North Atlantic Oscillation Arctic Oscillation Northern Hemisphere surface temperature

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Concentrations and sources of an emerging pollutant, decabromodiphenylethane (DBDPE), in sewage sludge for land application

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Journal of Environmental Sciences 2012年第3期24卷 558-563页

作者： de la torre A Concejero M A Martínez M A Persistent Organic Pollutant Group Environment Department CIEMAT Avd. Complutense 22 Madrid 28040 Spain

The presence of an emerging brominated flame retardant, decabromodiphenylethane （DBDPE）, has been confirmed in Spanish sewage sludge. Thirty one samples from different urban wastewater treatment plants （WWTPs） were analyzed for this brominated flame retardant. DBDPE was positively identified and quantified in all samples at lower concentrations （47.0 ± 29.7 ng/g dry weight （dw）; mean ± SD） than those obtained for decabromodiphenyl ether （Bde-209）（290 ± 236 ng/g dw; mean ± SD） in a previous study. Influence of the WWTP characteristics in the pollutant levels was evaluated. No significant correlations were obtained between DBDPE concentrations and the population or sewage sludge production rate associated with the plants, neither wastewater treatment method. Sources of DBDPE in the sludge were also evaluated. Data indicate a common origin for DBDPE and Bde-209, which may be related to leaching processes during the use and disposal of consumer products containing these chemicals. Nevertheless, DBDPE contents are not influenced by industrial activities, which suggests that the infusion of DBDPE commercial mixture is not a source of this chemical into the environment, and indicates that the use of DBDPE in the Spanish industry is still low compared to deca-Bde.

关键词： decabromodiphenylethane polybrominated diphenyl ethers wastewater treatment plants sewage sludge

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The ρ-variation of the Hermitian Riesz Transform

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Acta Mathematica Sinica,English Series 2010年第10期26卷 1827-1838页

作者： Raquel CRESCIMBENI Francisco Javier MARTíN-REYES Alberto de la torre josé L.torreA departamento de Matemática Universidad Nacional del Comahue Facultad de Economía y Administración departamento de Análisis Matemático Facultad de Ciencias Universidad de Málaga Facultad de Ciencias Universidad Autónoma de Madrid ICMAT-CSIC-UAM-UCM-UC3M

In this paper we prove the behaviour in weighted Lp spaces of the oscillation and variation of the Hilbert transform and the Riesz transform associated with the Hermite operator of dimension 1. We prove that this operator maps LP（R, w（x）dx） into itself when w is a weight in the Ap class for 1 〈 p 〈 ∞. For p = 1 we get weak type for the A1 class. Weighted estimated are also obtained in the extreme case p = ∞.

关键词： Oscillation-p-variation-singular integral-Hermite operator

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Gastroenterology case report of mesalazine-induced cardiopulmonary hypersensitivity

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World Journal of Gastroenterology 2015年第13期21卷 4069-4077页

作者： josé Ferrusquía Isabel Pérez-Martínez Ricardo Gómez de la torre María luisa Fernández-Almira Ruth de Francisco luis Rodrigo Sabino Riestra department of Gastroenterology Central University Hospital of Asturias33011 OviedoAsturiasSpain department of Internal Medicine Central University Hospital of Asturias33011 OviedoAsturiasSpain

Mesalazine is a 5-aminosalicylic acid derivative that has been widely used to treat patients with inflammatory bowel disease. Accumulating evidence indicates that mesalazine has a very low rate of adverse drug reactions and is well tolerated by patients. However, a few cases of pulmonary and cardiac disease related to mesalazine have been reported in the past, though infrequently, preventing clinicians from diagnosing the conditions early. We describe the case of a 32-yearold man with ulcerative colitis who was admitted with a two-month history of persistent fever following mesalazine treatment initiated 14 mo earlier. At the time of admission, mesalazine dose was increased from 1.5 to 3.0 g/d, and antibiotic therapy was started with no improvement. Three weeks after admission, the patient developed dyspnea, non-productive cough, and chest pain. Severe eosinophilia was detected in laboratory tests, and a computed tomography scan revealed interstitial infiltrates in both lungs, as well as a large pericardial effusion. The bronchoalveolar lavage reported a CD4/CD8 ratio of 0.5, and an increased eosinophil count. Transbronchial biopsy examination showed a severe eosinophilic infiltrate of the lung tissue. Mesalazine-induced cardiopulmonary hypersensitivity was suspected after excluding other possible etiologies. Consequently, mesalazine treatment was suspended, and corticosteroid therapy was initiated, resulting in resolution of symptoms and radiologic abnormalities. We conclude that mesalazine-induced pulmonary and cardiac hypersensitivity should always be considered in the differential diagnosis of unexplained cardiopulmonary symptoms and radiographic abnormalities in patients with inflammatory bowel disease.

关键词： Eosinophilia Mesalazine Pericardial effusion Lung

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Bird habitat preferences drive hemoparasite infection in the Neotropical region

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Integrative Zoology 2021年第5期16卷 755-768页

作者： Gabriel Massaccesi de la torre Karla Magalhães CAMPIÃO Biological Interactions Departamento de ZoologiaUniversidade Federal do ParanáCuritibaBrazil Programa de Pós-graduação em Ecologia e Conservação Universidade Federal do ParanáCuritibaBrazil

The role that the environment plays in vector-borne parasite infection is one of the central factors for understanding disease *** assessed how Neotropical bird foraging strata and habitat preferences determine infection by parasites of the genera Haemoproteus,Plasmodium,Leucocytozoon,and Trypanosoma and filarioids,and tested for phylogenetic signal in these host-parasite *** performed extensive searches of the scientific literature and created a database of hemoparasite *** collected data on host body mass,foraging strata,habitat preference,and migratory status,and tested if host ecological traits predict each hemoparasite occurrence and prevalence using a phylogenetic Bayesian *** of Plasmodium tend to infect birds from tropical forests while birds from altitudinal environments are likely to be infected by species of *** probability of a bird being infected by filarioid or Trypanosoma is higher in lowland *** species that occur in anthropic environments and dry habitats of tropical latitudes are more susceptible to infection by species of *** foraging strata is also influential and bird species that forage in the mid-high and canopy strata are more prone to infection by species of Haemoproteus and *** also identified phylogenetic signal for host-parasite associations with the probability of infection of Neotropical birds by any hemoparasite being more similar among more closely related *** provided a useful framework to identify environments that correlate with hemoparasite infection,which is also helpful for detecting areas with potential suitability for hemoparasite infection due to land conversion and climate change.

关键词： habitat use haemosporidians host-parasite interaction migratory birds prevalence

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Modelling of compacted graphite cast iron solidification-Discussion of microstructure parameters

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China Foundry 2020年第2期17卷 144-149页

作者： Jacques lacaze Urko de la torre Jon Sertucha Anna Regordosa Centre Inter-universitaire de Recherche et d’Ingénierie des Matériaux(CIRIMAT) Universitéde ToulouseToulouseFrance Fundación AZTERlaN DurangoSpain

A melt maintained for hours in a press pour unit allowed the following changes over time from spheroidal graphite to compacted graphite iron by casting thermal cups at regular time *** provided extensive experimental information for checking the possibility of simulating solidification of compacted graphite irons by means of a microstructure modelling *** solidification,compacted graphite develops very much as lamellar graphite but with much less *** this basis,a simulation of the thermal analysis records was developed which considers solidification proceeding in a pseudo binary Fe-C *** simulated curves were compared with the experimental ones obtained from three representative alloys that cover the whole microstructure change during the holding of the *** most relevant result is that the parameter describing branching capability of graphite is the most important for reproducing the minimum eutectic temperature and the recalescence which are so characteristic of the solidification of compacted graphite cast irons.

关键词： compacted graphite irons thermal analysis stable eutectic metastable eutectic simulation

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Evaluation of Early Action Mechanisms in Peru Regarding Preparedness for El Nino

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International Journal of Disaster Risk Science 2019年第4期10卷 493-510页

作者： Julio Aguirre Daniel de la torre Ugarte Juan Bazo Paulo Quequezana Mauricio Collado department of Economics Universidad del Pacifico15072 LimaPeru Red Cross Red Crescent Climate Centre 2502 KC The HagueThe Netherlands Centro de Investigacion de Riesgo Resiliencia y Cambio Climatico(CIRCA)Universidad Tecnologica del Peru(UTP)15046 LimaPeru

In this article,we provide an impact evaluation of an intervention in Peru regarding preparedness for El Nino impacts in Picsi District of Chiclayo Province in Peru’s northwestern coastal lambayeque *** effort involved the provision of special kits that reduce the potential damage to homes as a consequence of rainfall and floods associated with an El Nino-Southern Oscillation *** was collected in 2016 when this Forecast-based Financing early action was activated by an El Nino forecast,and after a coastal El Nino actually struck in *** dual database permits us to estimate the impact of the intervention on the damage level of homes by comparing those homes supported by the program with those homes not receiving pilot-program *** comparison is achieved by using propensity score matching techniques,which identify the most comparable homes to the ones that were supported by the *** main findings of the study suggest a positive impact of the program in terms of its effectiveness in mitigating the damage caused by the 2017 El Ni?*** results suggest a drop in the scale of house damage(less damage)by around 63%for a home that received the modular kit *** considering other specifications of the model,the decrease in the scale of house damage improves up to approximately 66%.

关键词： Early warning Early action El NinoSouthern Oscillation Forecast-based Financing Matching propensity score Perú Red Cross

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Effect of homogenization process on the hardness of Zn-Al-Cu alloys

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International Journal of Minerals,Metallurgy and Materials 2015年第10期22卷 1076-1081页

作者： jose D.Villegas-Cardenas Maribel L.Saucedo-Munoz Victor M.Lopez-Hirata Antonio de Ita-de la torre Erika O.Avila-Davila Jorge luis Gonzalez-Velazquez department of Metallurgy and Materials Instituto Politecnico Nacional(IPN-ESIQIE)Mexico City 07300Mexico department of Industrial Engineering Universidad Politecnica del Valle de MexicoMexico CityMexico department of Materials Universidad Autonoma Metropolitana(UAM)Unidad AzcapotzalcoMexico

The effect of a homogenizing treatment on the hardness of as-cast Zn–Al–Cu alloys was investigated. Eight alloy compositions were prepared and homogenized at 350 °C for 180 h, and their Rockwell 'B' hardness was subsequently measured. All the specimens were analyzed by X-ray diffraction and metallographically prepared for observation by optical microscopy and scanning electron microscopy. The results of the present work indicated that the hardness of both alloys(as-cast and homogenized) increased with increasing Al and Cu contents; this increased hardness is likely related to the presence of the θ and τ′ phases. A regression equation was obtained to determine the hardness of the homogenized alloys as a function of their chemical composition and processing parameters, such as homogenization time and temperature, used in their preparation.

关键词： zinc–aluminum–copper alloys casting hardness homogenization phases microstructure

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Genotoxicity evaluation of two derived products from Allium extracts:s-propylmercaptocysteine and s-propyl mercaptoglutathione

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Food Bioscience 2023年第3期53卷 1603-1611页

作者： Antonio Cascajosa-Lir Concepción Medrano-Padial Ana Isabel Prieto Alberto Baños josé M.de la torre Angeles jos Ana M.Cameán Área de Toxicología Facultad de FarmaciaUniversidad de SevillaProfesor García González n 241012SevilleSpain DMC Research Center Camino de Jayena 8218620AlhendínSpain

Propyl-propane-thiosulfonate(PTSO)is one of the main organosulfur compounds present in Allium essential oils with a widely documented biological *** this reason,it could be used as a food and feed additive in the agri-food industry.A genotoxicity evaluation of substances and their metabolites present in food is necessary to guarantee the consumer’s health following the recommendations of the European Food Safety Authority(EFSA).To evaluate the toxicological profile of derivatives of PTSO,the cytotoxicity,an Ames test,a micronucleus test and the comet assay were *** showed that non-cytotoxic effects were observed in Caco-2 exposed to s-propyl mercaptocysteine(CSSP)and s-propyl mercaptoglutathione(GSSP)(0-450μM).The mutagenicity index remained in the range of 0.6-1.4 for both compounds,showing no mutagenic effects for the concentrations of 5000-312.5μg GSSP/plate and 250-15.63μg CSSP/***,the%binucleated cells with micronuclei were 1.3-2.2 and 1.6-2.7 for GSSP and GSSP,*** comet assays there was no DNA-genotoxic or oxidative damage in a concentration range of 112.5-450μ***,we can conclude that these compounds are not genotoxic at the conditions *** results support that the presence of CSSP and GSSP in the food/feed is not of concern,although further studies are needed to complete their safety profile.

关键词： Cytotoxicity Genotoxicity Mutagenicity Organosulfur compounds Allium Propyl-propane-thiosulfonate

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