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high-throughput Phenotyping and Genomic Selection:The Frontiers of crop Breeding converge

Journal of Integrative Plant Biology 2012年第5期54卷 312-320页

作者： Lloren cabrera-Bosquet jos crossa Jarislav von Zitzewitz María Dolors Serret jos Luis Araus French National Institute for Agricultural Research (INRA UMR759)Ecophysiology Laboratory of Plants under Environmental StressMontpellier F-34060France International Maize and Wheat Improvement center (cIMMYT) El BatnTexcoco CP 56130Mexico National Research Program on Rainfed crops National Institute for Agricultural ResearchEst.Exp.La EstanzuelaColonia 70000Uruguay Unit of Plant Physiology Faculty of BiologyUniversity of BarcelonaAv.Diagonal643Barcelona 08028Spain

Genomic selection （GS） and high-throughput phenotyping have recently been captivating the interest of the crop breeding com- munity from both the public and private sectors world-wide. Both approaches promise to revolutionize the prediction of complex traits, including growth, yield and adaptation to stress. Whereas high-throughput phenotyping may help to improve understanding of crop physiology, most powerful techniques for high-throughput field phenotyping are empirical rather than analytical and compa- rable to genomic selection. Despite the fact that the two method- ological approaches represent the extremes of what is understood as the breeding process （phenotype versus genome）, they both consider the targeted traits （e.g. grain yield, growth, phenology, plant adaptation to stress） as a black box instead of dissectingthem as a set of secondary traits （i.e. physiological） putatively related to the target trait. Both GS and high-throughput phenotyping have in common their empirical approach enabling breeders to use genome profile or phenotype without understanding the underlying biology. This short review discusses the main aspects of both approaches and focuses on the case of genomic selection of maize flowering traits and near-infrared spectroscopy （NIRS） and plant spectral reflectance as high-throughput field phenotyping methods for complex traits such as crop growth and yield.

关键词： Genomic selection high-throughput phenotyping NIRS quantitative traits SNPs.

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Fractional Square Functions and Potential Spaces, Ⅱ

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Acta Mathematica Sinica,English Series 2015年第11期31卷 1759-1774页

作者： Jorge J.BETANcOR Juan c.FARIA Lourdes RODRIGUEZ-MESA Ricardo TESTONI jos L.TORREA Departamento de Anlisis Matemtico Universidad de La Laguna Campus de Anchieta Avda.Astrofísico Francisco Snchez 38271 La Laguna (Sta.Cruz de Tenerife) Spain Departamento de Matemtica Universidad Nacional del Sur Avda. Alem 1253 8000 Bahía BlancaBuenos Aires Argentina Departamento de Matem'aticas Universidad Autónoma de Madrid ICMAT-CSIC-UAM-UCM-UC3MCiudad Universitaria de Canto Blanco 28049 Madrid Spain

In this paper, we study fractional square functions associated with the Poisson semigroup for SchrSdinger operators. We characterize the potential spaces in the SchrSdinger setting by using vertical, area and gλ, fra... 详细信息

关键词： g-function Schrodinger operator potential space

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Structure,stability,catalytic activity,and polarizabilities of small iridium clusters

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chinese Physics B 2018年第6期27卷 225-230页

作者： Francisco E Jorge josé R da costa Venaancio Unidade Academica dc Ffsica Universidade Federal de Campina Grande 58429-900 Campina Grande Brazil Departamento de Ffsica Universidade Federal do Espfrito Santo 29060-900 Vitoria Brazil

At the second order Douglas–Kroll–hess（DKh2） level, the B3 PW91 functional in conjunction with the relativistic all-electron basis set of valence triple zeta quality plus polarization functions are employed to compute bond lengths, dissociation energies, vertical ionization potentials, and the highest occupied molecular orbital-lowest unoccupied molecular orbital energy gaps of the small iridium clusters（Irn, n≤8）. These results are compared with the experimental and theoretical data available in the literature. Our results confirm the theoretical predictions made by Feng et al. about the catalytic activities of the Ir4 and Ir6 clusters. From the optimized geometries, DKh2 calculations of static electric mean dipole polarizabilities and polarizability anisotropies are also carried out. It is the first time that the polarizabilities of small iridium clusters have been studied. For n≤4, the mean dipole polarizabilities per atom present an odd–even oscillatory behavior,whereas from Ir5 to Ir8, they decrease with the cluster size increasing. The dependence of the polarizability anisotropy on the structure symmetry of the iridium cluster is verified.

关键词： B3PW91 functional all-electron basis sets DKh2 calculations iridium clusters polarizabilities

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Activation characteristics of candidate structural materials for a near-term Indian fusion reactor and the impact of their impurities on design considerations

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Plasma Science and Technology 2018年第6期20卷 186-193页

作者： h L SWAMI c DANANI A K ShAW Institute for Plasma Research Gandhinagar Gujarat 382428 India homi Bhabha National Institute (hBNI) Anushaktinagar Mumbai 400094 India

Activation analyses play a vital role in nuclear reactor *** analyses,along with nuclear analyses,provide important information for nuclear safety and maintenance *** analyses also help in the selection of materials for a nuclear reactor,by providing the radioactivity and dose rate levels after *** information is important to help define maintenance activity for different parts of the reactor,and to plan decommissioning and radioactive waste disposal *** study of activation analyses of candidate structural materials for near-term fusion reactors or ITER is equally essential,due to the presence of a highenergy neutron environment which makes decisive demands on material *** study comprises two parts; in the first part the activation characteristics,in a fusion radiation environment,of several elements which are widely present in structural materials,are *** reveals that the presence of a few specific elements in a material can diminish its feasibility for use in the nuclear *** second part of the study concentrates on activation analyses of candidate structural materials for near-term fusion reactors and their comparison in fusion radiation *** structural materials selected for this study,***-specific Reduced Activation Ferritic-Martensitic steel（IN-RAFMS）,P91-grade steel,stainless steel 316 LN ITER-grade（SS-316 LN-IG）,stainless steel 316 L and stainless steel 304,are candidates for use in ITER either in vessel components or test blanket *** is also included in this study because of its use for ITER plasma-facing *** study is carried out using the reference parameters of the ITER fusion *** activation characteristics of the materials are assessed considering the irradiation at an ITER equatorial *** presence of elements like Nb,Mo,co and Ta in a structural material enhance the activity level as well as the dose level,which has an

关键词： activation EASY nuclear safety fusion reactor structural materials

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Assessing tree crown fire damage integrating linear spectral mixture analysis and supervised machine learning on Sentinel-2 imagery

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International Journal of Digital Earth 2023年第1期16卷 3162-3198页

作者： Giandomenico De Luca Giuseppe Modica Joao M.N.Silva Salvatore Praticò joséM.c.Pereira Dipartimento di Agrari1 Universitàdegli Studi Mediterranea di Reggio Calabri1Reggio Calabri1Italy Dipartimento di Scienze veterinarie Universitàdegli Studi di Messin1Messin1Italy Forest Research centre School of AgricultureUniversity of LisbonLisbonPortugal

crown fire damage is a mixture of three principal fire-related components:charred material,scorched foliage,and unaltered green *** study estimated the abundance of these physical alterations in two immediate post-fire Mediterranean forest contexts(Portugal and Italy)by applying linear spectral mixture analysis(LSMA)on Sentinel-2 *** tree crowns fire damage was subsequently mapped,integrating fractional abundance information in a random forest(RF)algorithm,comparing the accuracy resulting from the adoption of generic or image spectral libraries as the primary investigative *** image-derived endmembers resulted in more effectiveness in terms of fire-related components abundance quantification(LMSAderived RMSEhe F-scores always were≥90%whether generic endmembers or image endmembers derived information was *** environmental heterogeneity of the two study areas affected the fire severity gradients,with a prevalence of the charred(PT)(45–46%)and green class(IT)(44–53%).Post-fire temporal monitoring was initialized by applying the proposed strategies,and the preliminary results showed a positive recovery trend in forest vegetation from the first year following the fire event,with a reduced charcoal predominance and an increasing proportion of green components.

关键词： Post-fire assessment fire severity post-fire vegetation recovery random forest(RF) scikit-learn fraction image extraction spectral unmixing endmembers crown fire damage mapping fully constrained least squares pixel purity index

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conductometric Titration for the Prediction of conductivity in Solutions with Polymeric Membranes

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Journal of Electronic Science and Technology 2017年第4期15卷 342-350页

作者： María josé Lavorante Juan Isidro Franco Research and Development of Renewable Energy Department at cITEDEF Institute of Scientific and Technical Research for the Defense Villa Martelli B1603ALO Argentina

The analytical technique of conductometric titration is used to characterize polymeric *** technique allows obtaining the polymer dry weight capacity(DWc) and the extent of reaction and establishing the optimal number of water molecules per sulfonic *** this particular case the polymer material under study was Nafion?*** different reactions were made: Neutralization and *** of them allow obtaining the same *** titrations could be considered as a good method to study the neutralization and exchange reactions for polymeric materials used in fuel cells or *** implementation of this analytical technique allows reducing operation time of those types of *** waiting time between determinations permits to say that the amount of reactant consumed and products obtained were the same after each addition of titrant.

关键词： conductivity conductometric titration polymeric membranes

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Are the number and size of scales in Liolaemus lizards driven by climate?

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Integrative Zoology 2018年第5期13卷 579-594页

作者： María joséTULLI Félix BcRUZ Unidad Ejecutora Lillo(UEL-cONIcET) Instituto de HerpetologíaFundación Miguel LilloSan Miguel de TucumánTucumánArgentina Instituto de Investigaciones en Biodiversidad y Medioambiente(INIBIOMA)cONIcET-UNcOMA BarilocheRío NegroArgentina

Ectothermic vertebrates are sensitive to thermal fluctuations in the environments where they *** buffer these fluctuations,ectotherms use different strategies,including the integument,which is a barrier that minimizes temperature exchange between the inner body and the surrounding *** lizards,this barrier is constituted by keratinized scales of variable size,shape and texture,and its main function is protection,water loss avoidance and *** size of scales in lizards has been proposed to vary in relation to climatic gradients;however,it has also been observed that in some groups of Iguanian lizards it could be related to ***,here,we studied the area and number of scales(dorsal and ventral)of 60 species of Liolaemus lizards distributed in a broad latitudinal and altitudinal gradient to determine the nature of the variation of the scales with climate,and found that the number and size of scales are related to climatic variables,such as temperature and geographical variables as *** evolutionary process that best explained how these morphological variables evolved was the Ornstein–Uhlenbeck *** number of scales seemed to be related to common ancestry,whereas dorsal and ventral scale areas seemed to vary as a consequence of ecological *** fact,the ventral area is less exposed to climate conditions such as ultraviolet radiation or wind and is,thus,under less pressure to change in response to alterations in external *** is possible that scale ornamentation,such as keels and granulosity,may bring some more information in this regard.

关键词： climate variables habitat use Lioalemidae scale traits

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Glucagon-like peptide 1 receptor activation:anti-inflammatory effects in the brain

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Neural Regeneration Research 2024年第8期19卷 1671-1677页

作者： Yolanda Diz-chaves Zainab Maastor carlos Spuch josé Antonio Lamas Lucas c.González-Matías Federico Mallo Biomedical Research centre(cINBIO) Laboratory of EndocrinologyUniversity of VigoGalicia Sur Health Research InstituteVigoSpain Translational Neuroscience Research Group Galicia Sur Health Research InstituteCIBERSAMHospitalÁlvaro CunqueiroSala InvestigaciónEstrada Clara CampoamorVigoSpain Biomedical Research centre(cINBIO) Laboratory of NeuroscienceUniversity of VigoGalicia Sur Health Research InstituteVigoSpain

The glucagon-like peptide 1 is a pleiotropic hormone that has potent insulinotropic effects and is key in treating metabolic diseases such as diabetes and ***-like peptide 1 exerts its effects by activating a membrane receptor identified in many tissues,including diffe rent brain ***-like peptide 1 activates several signaling pathways related to neuroprotection,like the support of cell growth/survival,enhancement promotion of synapse formation,autophagy,and inhibition of the secretion of proinflammatory cytokines,microglial activation,and apoptosis during neural *** glial cells,including astrocytes and microglia,maintain metabolic homeostasis and defe nse against pathogens in the central nervous *** brain insult,microglia are the first cells to respond,followed by reactive *** activated cells produce proinflammato ry mediators like cytokines or chemokines to react to the ***,under these circumstances,mic roglia can become chro nically inflammatory by losing their homeostatic molecular signature and,consequently,their functions during many *** processes promote the development of neurological disorders and influence their pathological evolution:like the formation of protein aggregates,the accumulation of abnormally modified cellular constituents,the formation and release by injured neurons or synapses of molecules that can dampen neural function,and,of critical impo rtance,the dysregulation of inflammato ry control *** glucagonlike peptide 1 receptor agonist emerges as a critical tool in treating brain-related inflammatory pathologies,restoring brain cell homeostasis under inflammatory conditions,modulating mic roglia activity,and decreasing the inflammato ry *** review summarizes recent advances linked to the anti-inflammato ry prope rties of glucagon-like peptide 1 receptor activation in the brain related to multiple sclerosis,Alzheimer’s disease,Parkins

关键词： astrocytes brain glucagon-like peptide 1 receptor inflammation microglia

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Growth mechanism of octahedron-like BaMoO_4 microcrystals processed in microwave-hydrothermal:Experimental observations and computational modeling

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Particuology 2009年第5期7卷 353-362页

作者： Laécio Santos cavalcante Júlio césar Sczancoski Rircado Luis Tranquilin josé Arana Varela Elson Longo Marcelo Ornaghi Orlandi Departamento de Química UFSCarP.O. Box 67613565-905So CarlosSPBrazil Instituto de Química-UNESP P.O. Box 35514801-907AraraquaraSPBrazil

Octahedron-like BaMoO4 microcrystals were synthesized by the co-precipitation method at room temperature and processed in microwave-hydrothermal at 413 K for different times （from 30 min to 5 h）. These microcrystals were analyzed by X-ray diffraction （XRD）, field-emission gun scanning electron microscopy （FEG-SEM） and transmission electron microscopy （TEM）. XRD patterns showed that this material presents a tetragonal structure without the presence of deleterious phases. FEG-SEM and TEM micrographs revealed that the BaMoO4 microcrystals present an octahedron-like morphology with agglomerate nature and polydisperse particle size distribution. These micrographs also indicated that the microcrystals grow along the [0 01 ] direction. The observed crystallographic planes in these structures were modeled computationally and a crystal growth model was proposed in order to explain the morphological changes as a function of processing time.

关键词： BaMoO4 Growth process Microwave-hydrotherma Supersaturated solution

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Simulation of Vortex convection in a compressible Viscous Flow with Dynamic Mesh Adaptation

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Advances in Applied Mathematics and Mechanics 2014年第5期6卷 590-603页

作者： c.h.Zhou Department of Aerodynamics Nanjing University of Aeronautics and AstronauticsNanjing 210016China

In this work,vortex convection is simulated using a dynamic mesh adaptation *** each adaptation period,the mesh is refined in the regions where the phenomena evolve and is coarsened in the regions where the phenomena deviate since the last adaptation.A simple indicator of mesh adaptation that accounts for the solution progression is *** generation of dynamic adaptive meshes is based on multilevel refinement/*** efficiency and accuracy of the present procedure are validated by simulating vortex convection in a uniform *** unsteady compressible turbulent flows involving blade-vortex interactions are investigated to demonstrate further the applicability of the *** results agree well with the published experimental data or numerical results.

关键词： Mesh adaptation vortex-convection blade-vortex interaction unsteady flow timedependent problem shock-vortex interaction.

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