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Hepatitis C virus NS5A region mutation in chronic hepatitis C genotype 1 patients who are non-responders to two or more treatments and its relationship with response to a new treatment

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World Journal of Gastroenterology 2017年第25期23卷 4538-4547页

作者： Paloma Munoz de rueda José Manuel Fuentes RodríguezRosa Quiles Pérez Ana Gila Medina Ana Belén Martínálvarez jorge casado ruíz ángeles ruíz Extremera Javier Salmerón Research Support Unit San Cecilio University Hospital of Granada Instituto de Investigación Biosanitaria CIBERehd Instituto de Salud Carlos III Unit for Clinical Management of Digestive Diseases San Cecilio University Hospital of Granada Granada University

To determine the number of mutations in the NS5A region of the hepatitis C virus (HCV) and its relationship to the response to antiviral therapy in patients with chronic hepatitis C genotype 1 who are non-responders to two or more treatments. METHODSSequences within HCV NS5A [PKR binding domain (PKRBD) and the interferon-sensitivity-determining region (ISDR)] were analysed via direct sequencing in a selected cohort of 72 patients, with a total of 201 treatments [interferon-alpha (IFN-α), n = 49; IFN-α + ribavirin (RBV), n = 75; pegylated (peg) IFN-α + RBV, n = 47; first-generation direct-acting antivirals (DAAs), n = 13; and second-generation DAAs, n = 17]. Of these, 48/201 achieved a sustained virological response (SVR) and 153/201 achieved no virological response (NVR). RESULTSFor both regions, treatments resulting in SVR were associated with more baseline mutations than were treatments resulting in NVR (SVR vs NVR; PKRBD: 5.82 ± 3 vs 4.86 ± 2 mutations, P = 0.045; ISDR: 2.65 ± 2 vs 1.51 ± 1.7 mutations, P = 0.005). A decrease or no change in the number of mutations over time between treatments in the PKRBD or ISDR, as shown by sequencing, was associated with patients who usually failed to respond to treatment (PKRBD, P = 0.02; ISDR, P = 0.001). Moreover, patients showing a post-treatment baseline viral load > 600000 IU/mL and increased ISDR mutations with respect to the previous treatment were 9.21 times more likely to achieve SVR (P = 0.001). CONCLUSIONThe obtained results show that among patients who have shown no response to two or more antiviral treatments, the likelihood of achieving SVR increases with the genetic variability in the ISDR region (≥ 2 mutations or number of substitutions from the HCV-J and HCV-1 prototype), especially when the viral load is greater than 600000 IU/mL.

关键词： Interferon-based therapy Interferon-free therapy Chronic hepatitis C NS5A region Sustained virological response Number of mutations

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Prevalence of Helicobacter pylori infection among patients with esophageal carcinoma

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World Journal of Gastroenterology 2024年第29期30卷 3479-3487页

作者： Miriam López-Gómez Maria Morales Rebeca Fuerte Marta Muñoz Pedro-David Delgado-López jorge Francisco Gómez-Cerezo Enrique casado Department of Medical Oncology Precision Oncology LaboratoryInfanta Sofía University HospitalSan Sebastián de los Reyes 28231MadridSpain Department of Medical Oncology Infanta Sofía University HospitalSan Sebastián de los Reyes 28702Spain Department of Internal Medicine Infanta Sofía University HospitalSan Sebastián de los Reyes 28703MadridSpain Department of Pathology Infanta Sofía University HospitalSan Sebastián de los Reyes 28702Spain Department of Neurosurgery Burgos University HospitalBurgos 09006Spain Department of Internal Medicine Infanta Sofía University Hospital and Henares University Hospital Foundation for Biomedical Research and InnovationSan Sebastian de los Reyes 28702MadridSpain Department of Medical Oncology Infanta Sofia University Hospital and Henares University Hospital Foundation for Biomedical Research and InnovationSan Sebastian de los Reyes 28702MadridSpain

BACKGROUND Helicobacter pylori(***)is a widespread microorganism related to gastric adenocarcinoma(AC).In contrast,it has been reported that an inverse association exists between *** infection and esophageal *** mechanisms underlying this supposedly protective effect remain *** To determine the prevalence of *** infection in esophageal carcinoma patients,we performed a retrospective observational study of esophageal tumors diagnosed in our *** We retrospectively reviewed the prevalence of *** infection in a cohort of patients diagnosed with esophageal *** or previous proton pump inhibitor(PPI)usage was also *** A total of 89 patients with esophageal carcinoma(69 males,77.5%),with a mean age of 66 years(range,26-93 years)were *** was the most frequent pathological variant(n=47,52.8%),followed by squamous cell carcinoma(n=37,41.6%).Fourteen ACs(29.8%)originated in the gastroesophageal junction and 33(70.2%)in the esophageal ***,54 patients(60.7%)presented at stages III and *** *** infection occurred only in 4 patients(4.5%),3 with AC(6.3%of all ACs)and 1 with squamous cell carcinoma(2.7%of all squamous cell tumors).All patients with previous *** infection had stage *** one patient had received prior *** eradication therapy,whereas 86(96.6%)had received previous or concomitant PPI *** In our cohort of patients,and after histologic evaluation of paraffin-embedded primary tumors,we found a very low prevalence of previous *** *** also reviewed the medical history of the patients,concluding that the majority had received or were on PPI *** minimal prevalence of *** infection found in this cohort of patients with esophageal carcinoma suggests a protective role.

关键词： Helicobacter pylori Eradication Esophageal tumor Dysbiosis Proton pump inhibitors Carcinogenesis Microbiota Incidence

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Cost-Effectiveness Analysis of Renalof® versus Extracorporeal Shockwave Lithotripsy (ESWL) for the Treatment of Kidney Stones ≤ 1 cm in Nicaragua

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Health 2024年第7期16卷 674-687页

作者： Mélida M. Aguilar Chamorro Sergio Vargas Collado Leslie Pérez ruíz David Márquez Soriano jorge Luis Soriano García Clínica Senior Managua Nicaragua Centro de Inmunología Molecular Havana Cuba Catalysis S.L. Madrid Spain

Objectives: To assess the efficiency in terms of cost-effectiveness (CE) of oral Renalof® treatment versus extracorporeal shockwave lithotripsy (ESWL) in the treatment of kidney stones ≤ 1 cm in Nicaragua. Methods: A cost-effectiveness economic evaluation was carried out based on the results obtained in the randomised, prospective, observational, single-blind, prospective, phase 2 clinical trial. Cost-effectiveness and the incremental cost-effectiveness ratio (ICER) were calculated. Economic data were obtained from the Economics Department of Clínica Senior in Managua, Nicaragua. The monetary cost was expressed in US dollars (USD). Results: Treatment with Renalof® yielded a CE of $1,323.08/% remission, while ESWL was $9,498.54/% remission. The ICER shows that, in order to achieve a high percentage of kidney stone remission with ESWL, an extra $4,734.70 per patient must be invested. Conclusions: The use of Renalof® is shown to be a more cost-effective option than ESWL. It is recommended for the treatment of kidney stones ≤ 1 cm in size.

关键词： Economic Evaluation Pharmacoeconomics Renalof® Extracorporeal Shockwave Lithotripsy Kidney Stones

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Socio-spatial organization reveals paternity and low kinship in the Honduran white bat(Ectophylla alba)in Costa Rica

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Integrative zoology 2021年第5期16卷 646-658页

作者： Edgar G.GUTIÉRREz Isabela VIVAS-TORO Daniela CARMONA-ruÍz David VILLALOBOS-CHAVES Bernal RODRÍGUEz-HERRERA Melina Del REAL-MONROY Gloria LEÓN-AVILA jorge ORTEGA Laboratorio de Bioconservación y Manejo Posgrado en Ciencias QuimicobiológicasDepartamento de ZoologíaEscuela Nacional de Ciencias BiológicasInstituto Politécnico NacionalCiudad de MéxicoMéxico Department of Biology University of WashingtonSeattleWashingtonUSA Escuela de Biología Universidad de Costa RicaSan JoséCosta Rica Laboratorio de Genómica Evolutiva Doctorado en Ciencias BásicasUniversidad Autónoma de ZacatecasZacatecasZac.México Laboratorio de Genética Posgrado en Ciencias QuimicobiológicasDepartamento de ZoologíaEscuela Nacional de Ciencias BiológicasInstituto Politécnico NacionalCiudad de MéxicoMéxico

Ectophylla alba is a tent-making bat that roosts in mixed-sex clusters comprising adults and *** goal was to determine the genetic identity of individuals belonging to different roosting *** tested the hypothesis of kin selection as a major force structuring group *** used 9 microsatellites designed for *** to determine the genetic identity and probability of parentage of *** analyzed parentage and kinship using the software ML-Relate,GenAIEx,and *** obtained relationship probabilities(0.5)revealed a clear maternal relationship between female adults and offspring with allele compatibility,and at least 5 relationships between male adults and *** found a low degree of relatedness within roosting *** roosting groups at different sites,the mean probability of a half-sibling relationship ranged from 0.214 to 0.244 and,for full-sibling relationship,from 0.383 to ***,adult individuals were poorly related within clusters,and kinship as an evolutionary force could not explain group membership.

关键词： Ectophylla alba group composition kinship microsatellites relatedness

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Muscle strength cut-offs for the detection of metabolic syndrome in a nonrepresentative sample of collegiate students from Colombia

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Journal of Sport and Health Science 2020年第3期9卷 283-290页

作者： Antonio Garcia-Hermoso Alejandra Tordecilla-Sanders jorge Enrique Correa-Bautista Mark D.Peterson Mikel Izquierdo Aura Cristina Quino-ávila Carolina Sandoval-Cuellar Katherine González-ruíz Robinson Ramíez-Vélez Physical Activity Sport and Health Sciences LaboratoryUniversity of Santiago de ChileSantiago de Chile 7500618Chile Center of Studies in Physical Activity Measurements School of Medicine and Health SciencesUniversidad del RosarioBogot a 111221Colombia Department of Physical Medicine and Rehabilitation University of MichiganAnn ArborMichigan 48109USA Department of Health Sciences Public University of NavarreCIBERFES(CB16/10/00315)Navarre 31009Spain CORPS Group Faculty of Health SciencesUniversity of BoyacáBoyac aTunja 153610Colombia Physical Exercise and Sports Research Group Manuela Beltrán UniversityBogot a 111221Colombia

Background: Evidence shows an association between grip strength and health;however, grip strength cut-offs for the detection of metabolic syndrome(MetS) in Latin American populations are scarce. The purpose of this study was to determine cut-offs of normalized grip strength(NGS)for the detection of MetS in a large nonrepresentative sample of a collegiate student population from ***: A total of 1795 volunteers(61.4% female;age = 20.68 ± 3.10 years, mean ± SD), ranging between 18 and 30 years of age participated in the study. Strength was estimated using a handheld dynamometer and normalized to body mass(handgrip strength(kg)/body mass(kg)). Anthropometrics, serum lipids indices, blood pressure, and fasting plasma glucose were measured. Body composition was measured by bioelectrical impedance analysis. MetS was defined as including ≥3 of the 5 metabolic abnormalities according to the International Diabetes Federation definition. A metabolic risk score was computed from the following components: waist circumference, triglycerides, high-density lipoprotein cholesterol, glucose, and systolic and diastolic blood ***: Receiver operating curve analysis showed significant discriminatory accuracy of NGS in identifying the thresholds and risk *** strength was associated with increased prevalence of MetS. In males, weak, intermediate, and strong NGS values at these points were0.615, respectively. In females, these cut-off points were 0.437, ***: Our sex-specific cut-offs of NGS could be incorporated into a clinical setting for identifying college students at cardiometabolic disease risk.

关键词： Cardiometabolic risk Muscular fitness Receiver operating characteristic curve Thresholds

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First histopathological study in kidneys of rodents naturally infected with Leptospira pathogenic species from Yucatan, Mexico

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Asian Pacific Journal of Tropical Medicine 2016年第2期9卷 140-142页

作者： Marco Torres-Castro Leonardo Guillermo-Cordero Silvia Hernández-Betancourt Edwin Gutiérrez-ruíz Piedad Agudelo-Flórez Ronald Peláez-Sánchez jorge zavala-Castro Fernando I.Puerto Centro de Investigaciones Regionales ‘Dr.Hideyo Noguchi' Universidad Autónoma de Yucatán Campus de Ciencias Biológicas y Agropecuarias Universidad Autónoma de Yucatán Facultad de Medicina Universidad CES

Objective: To report the renal histological lesions in synanthropic rodents, Mus musculus and Rattus rattus, naturally infected with Leptospira spp., captured in a rural community in Yucatan, Mexico. Methods: Kidney samples of synanthropic rodents were collected from a rural community in Yucatan, Mexico. Polymerase chain reaction was used to detect Leptospira spp. infection. Tissue kidney was fixed in 10% buffered formalin, processed according to the usual techniques for paraffin inclusion, cut and stained with hematoxylin and eosin, and examined using a conventional electronic microscope. Results: A total of 187 rodents were captured. Nine individuals(4.8%) were positive for Leptospira spp. in the molecular analysis. All renal lesions observed in the histopathological study had been reported previously for Leptospira spp. infection. Conclusions: The histopathological lesions are present in the kidneys, plus the results of the polymerase chain reaction confirm that these rodents are true carriers of Leptospira spp.

关键词： Leptospira spp. Renal histopathological lesions Mus musculus Rattus rattus

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Stem Population and Tissue Replacement of <i>Urochloa</i>in Different Phenological Stages

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American Journal of Plant Sciences 2020年第8期11卷 1296-1306页

作者： María de los Ángeles Maldonado Peralta Adelaido Rafael Rojas García Jessica Lizbeth ruíz Clavel Herminio Aniano Aguirre Filiberto Magadan Olmedo Leopoldo jorge Castañeda Uriel Mondragón Calderón Universidad Autónoma de Guerrero Facultad de Medicina Veterinaria y Zootecnia Cuajinicuilapa Guerrero México Tecnológico Nacional de México Campus Instituto Tecnológico de Pinotepa Pinotepa Nacional Oaxaca México

The objective of the present investigation was to evaluate the Urochloa Insurgent, Piata and Signal grasses by varying the phenology in the attributes: stem population dynamics, tissue replacement, leaf:stem relation and weight per stem. The data were analyzed using a completely randomized block design with arrangement in divided plots and four replications, the procedure used was PROC GLM from SAS. The Signal grass presented higher stem density with an average of 450 m?2 stems, while the meadow with Insurgent grass registered the lowest stem density throughout the investigation, with an average of 320 m-2 stems;furthermore, in this treatment, the stem density tended to increase slowly over time (P = 0.05). The Insurgente and signal grasses showed rapid leaf elongation from day 21 of regrowth with 123 and 104 cm stem?1, while in Piata the accelerated leaf elongation was on day 14 with 113 cm stem?1 where it remained active its growth until day 56 (P > 0.05). As the regrowth age was increasing, the population dynamics of stems and weight per stem were increasing;in Insurgent and signal the leaf elongation and net growth increased to a maximum point to start declining;however, in Piata grass was increasing without decreasing. The trend of the leaf:stem relation was decreasing as the test progressed and senescence increased from day 21 of regrowth.

关键词： Urochloa Stem Population Leaf Elongation Weight Per Stem

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High-quality reference genomes of swallowtail butterflies provide insights into their coloration evolution

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zoological Research 2022年第3期43卷 367-379页

作者： Jin-Wu He ru zhang Jie Yang zhou Chang Li-Xin zhu Si-Han Lu Fei-Ang Xie Jun-Lai Mao zhi-Wei Dong Gui-Chun Liu Ping Hu Yan Dong Wen-Ting Wan ruo-Ping zhao Tian-zhu Xiong jorge LLeón-Cortés Chu-Yang Mao Wei zhang Shuai zhan Jun Li Lei Chen Wen Wang Xue-Yan Li State Key Laboratory of Genetic Resources and Evolution Kunming Institute of ZoologyChinese Academy of SciencesKunmingYunnan 650223China School of Ecology and Environment Northwestern Polytechnical UniversityXi’anShaanxi 710072China Department of Biology and Food Engineering Chuzhou UniversityChuzhouAnhui 239000China School of Marine Science and Technology Zhejiang Ocean UniversityZhoushanZhejiang 316022China Department of Organismic and Evolutionary Biology Harvard UniversityCambridgeMA 02138USA Ecología para la Conservación de la Fauna Silvestre El Colegio de la Frontera Sur(ECOSUR)Carretera Panamericana y Periférico Sur s/n Barrio María AuxiliadoraSan Cristóbal de Las CasasChiapas CP 29290Mexico State Key Laboratory of Protein and Plant Gene Research Peking UniversityBeijing 100871China CAS Key Laboratory of Insect Developmental and Evolutionary Biology CAS Center for Excellence in Molecular Plant SciencesChinese Academy of SciencesShanghai 200032China Kunming College of Life Science University of Chinese Academy of SciencesKunmingYunnan 650223China Center for Excellence in Animal Evolution and Genetics KunmingYunnan 650223China

Swallowtail butterflies(Papilionidae)are a historically significant butterfly group due to their colorful wing patterns,extensive morphological diversity,and phylogenetically important position as a sister group to all other butterflies and have been widely studied regarding ecological adaption,phylogeny,genetics,and ***,they contain a unique class of pigments,i.e.,papiliochromes,which contribute to their color diversity and various biological functions such as predator avoidance and mate *** date,however,the genomic and genetic basis of their color diversity and papiliochrome origin in a phylogenetic and evolutionary context remain largely ***,we obtained high-quality reference genomes of 11 swallowtail butterfly species covering all tribes of Papilioninae and Parnassiinae using long-read sequencing *** with previously published butterfly genomes,we obtained robust phylogenetic relationships among tribes,overcoming the challenges of incomplete lineage sorting(ILS)and gene *** genomic analyses indicated that the evolution of Papilionidae-specific conserved non-exonic elements(PSCNEs)and transcription factor binding sites(TFBSs)of patterning and transporter/cofactor genes,together with the rapid evolution of transporters/cofactors,likely promoted the origin and evolution of *** findings not only provide novel insights into the genomic basis of color diversity,especially papiliochrome origin in swallowtail butterflies,but also provide important data resources for exploring the evolution,ecology,and conservation of butterflies.

关键词： High-quality reference genome Swallowtail butterfly tribe Color evolution Papiliochromes

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Gastrointestinal tumors and infectious agents:A wide field to explore

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World Journal of Meta-Analysis 2021年第6期9卷 505-521页

作者： Miriam López-Gómez Belén García de Santiago Pedro-David Delgado-López Eduardo Malmierca Jesús González-Olmedo César Gómez-Raposo Carmen Sandoval Pilar ruiz-Seco Nora Escribano jorge Francisco Gómez-Cerezo Enrique casado Medical Oncology Department.Precision Oncology Laboratory Infanta Sofía University HospitalSan Sebastián de los Reyes 28231MadridSpain Pharmacy Department Infanta Sofia University HospitalSan Sebastián de los Reyes 28703MadridSpain Neurosurgery Department Burgos University HospitalBurgos 09006Spain Internal Medicine Department Infanta Sofía University HospitalSan Sebastián de los Reyes 28703MadridSpain Medical Oncology Department Infanta Sofia University HospitalSan Sebastián de los Reyes 28703MadridSpain Intensive Care Unit Jiménez Díaz FoundationMadrid 28040MadridSpain

Infection is currently one of the main contributors to *** fact,the International Agency for Research on Cancer has categorized eleven biological agents as group I *** is estimated that around 16%of the 12.7 million new cancers diagnosed in 2008 were attributable to infectious *** underdeveloped regions carry the highest incidence rates,about 7.4%of infectionrelated cancer cases occur in developed *** are increasingly aware of the potential carcinogenic role of common virus like the Human Papilloma virus in cervical cancer,or the hepatitis B and C viruses in ***,the carcinogenic role of several other infectious agents is less *** that gastrointestinal malignancies carry an overall poor prognosis,a better understanding of the carcinogenic mechanisms triggered by infectious agents is key to decrease the rate of cancer related *** measures directed to such infections would ideally impact *** this paper we review the main pathogenic mechanisms related to the development of gastrointestinal malignancies induced by infectious microorganisms and other pathogens which are currently under investigation.

关键词： Gastrointestinal tumors Infectious agents Bacteria Virus Prevention

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High-quality reference genomes of swallowtail butterflies provide insights into their coloration evolution

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动物学研究 2022年第3期

作者： Jin-Wu He ru zhang Jie Yang zhou Chang Li-Xin zhu Si-Han Lu Fei-Ang Xie Jun-Lai Mao zhi-Wei Dong Gui-Chun Liu Ping Hu Yan Dong Wen-Ting Wan ruo-Ping zhao Tian-zhu Xiong jorge L.León-Cortés Chu-Yang Mao Wei zhang Shuai zhan Jun Li Lei Chen Wen Wang Xue-Yan Li

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