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Application of a Pulsed Electric Field to Modify the Free Energy of the Active Site of an Azoreductase

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Journal of Applied Mathematics and Physics 2024年第1期12卷 249-255页

作者： Jesus Magyber de Jesus Miranda Pedro Guillermo Reyes-Romero jorge Mulia-Rodríguez Daniel Osorio-González Molecular Biophysics Laboratory Faculty of Sciences Autonomous University of State of Mexico Toluca Mexico Advanced Physics Laboratory Faculty of Sciences Autonomous University of State of Mexico Toluca Mexico

The Gibbs free energy is strongly related to the stability and catalytic function of an enzyme through the energetic changes that occur in the chemical reactions the enzyme catalyzes. In this in silico study, a pulsed electric field was applied to an azoreductase, and its effect on the Gibbs free energy of molecular docking with two dyes was measured. We propose that certain stimuli from a pulsed electric field favor the structural stability of the enzyme by promoting an arrangement in the active site, potentially leading to an enhancement of enzymatic activity overall.

关键词： Pulsed Electric Field Molecular Dynamics Docking Azoreductase

Root Sprouts of Domesticated Phaseolus coccineus L. Overwinter Plants and the Environment at Its Collection Sites

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Open Journal of Ecology 2024年第5期14卷 508-521页

作者： Ma. Luisa Patricia Vargas-Vázquez jorge Alberto Acosta-Gallegos Fabián Islas-Gutiérrez Enrique Buendía-Rodríguez Campo Experimental Valle de Mé xico Instituto Nacional de Investigaciones Forestales Agr&#237colas y Pecuarias Texcoco Mexico Campo Experimental Bají o Instituto Nacional de Investigaciones Forestales Agr&#237colas y Pecuarias Guanajuato M&#233xico

Buds emerge from the roots of domesticated runner bean plants (Phaseolus coccineus L.) as sprouts and give the crop its persistence. This particularity of the species seems to be associated with the environment where the species was cultivated during long time. Data on regrowth traits were recorded on 70 accessions of domesticated P. coccineus after overwintering at a site in the central highlands of Mexico. The characteristics recorded included fresh weight of vegetative regrowth, root length, root crown diameter, and diameter of the main root. Most accessions that sprout the following spring, after the grain harvest of the previous year, come from temperate and semi-cold sites with cambisol and andosol soils in mixed Quercus pine forest and high mountain fir trees. Those that do not sprout are from sites of semiarid temperate climate, haplic phaeozem soil in shrub grasslands with deciduous broadleaved trees, and semiwarm subhumid climate, eutrophic regosol soil in deciduous broadleaved forest. Two types of roots were differentiated: branched and thickened taproots, also associated with a different climate, and the type of soil of the collection sites.

关键词： P. coccineus Distribution Vegetation-Environment Interactions Drought-Alternative Species Root-Regrowth

A new oxidative pathway of nitric oxide production from oximes in plants

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Molecular Plant 2024年第1期17卷 178-198页

作者： Pedro Lopez-Gomez Javier Buezo Marina Urra Alfonso Cornejo Raquel Esteban jorge Fernandez de los Reyes Estibaliz Urarte Estefania Rodriguez-Dobreva Alejandro Chamizo-Ampudia Alejandro Eguaras Sebastian Wolf Daniel Marino Victor Martinez-Merino Jose F.Moran Institute for Multidisciplinary Research in Applied Biology(IMAB) Department of SciencesPublic University of Navarre(UPNA)Avda.de Pamplona 12331192 MutilvaSpain Institute for Advanced Materials and Mathematics(INAMAT2) Department of SciencesPublic University of Navarre(UPNA)Campus de Arosadia31006 PamplonaSpain Department of Plant Biology and Ecology University of the Basque Country(UPV/EHU)Sarriena s/nApdo.64448080 BilbaoSpain Center for Plant Molecular Biology(ZMBP) University of TubingenGeschwister-Scholl-Platz72074 TubingenGermany Institute of Natural Resources and Agrobiology of Salamanca(IRNASA) Department of Plant-Microorganism InteractionsSpanish National Research Council(CSIC)Cordel de Merinas40-5237008SalamancaSpain Department of Biochemistry Area of Molecular BiologyVeterinary FacultyUniversity of LeonCampus de Vegazanas/n.24071 LeonSpain

Nitric oxide(NO)is an essential reactive oxygen species and a signal molecule in *** several studies have proposed the occurrence of oxidative NO production,only reductive routes for NO production,such as the nitrate(NO_(3)^(-))-upper-reductase pathway,have been evidenced to date in land ***,plants grown axenically with ammonium as the sole source of nitrogen exhibit contents of nitrite and NO3−,evidencing the existence of a metabolic pathway for oxidative production of *** hypothesized that oximes,such as indole-3-acetaldoxime(IAOx),a precursor to indole-3-acetic acid,are intermediate oxidation products in NO *** detected the production of NO from IAOx and other oximes catalyzed by peroxidase(POD)enzyme using both 4-amino-5-methylamino-2′,7′-difluorescein fluorescence and *** stimulated the reaction,while superoxide dismutase inhibited ***,mouse NO synthase can also use IAOx to produce NO at a lower rate than *** provided a full mechanism for POD-dependent NO production from IAOx consistent with the experimental data and supported by density functional theory *** showed that the addition of IAOx to extracts from Medicago truncatula increased the in vitro production of NO,while in vivo supplementation of IAOx and other oximes increased the number of lateral roots,as shown for NO donors,and a more than 10-fold increase in IAOx dehydratase ***,we found that in vivo supplementation of IAOx increased NO production in Arabidopsis thaliana wild-type plants,while prx33-34 mutant plants,defective in POD33-34,had reduced *** data show that the release of NO by IAOx,as well as its auxinic effect,explain the superroot ***,our study reveals that plants produce NO utilizing diverse molecules such as oximes,POD,and flavins,which are widely distributed in the plant kingdom,thus introducing a long-awaited oxidative pathway to NO production in plants.T

关键词： ammonium oxidation auxin nitric oxide oxime peroxidase root phenotype

Generating oligodendroglia from adult mesenchymal cells for transplantation:cell reprogramming or direct lineage conversion?

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Neural Regeneration Research 2023年第7期18卷 1493-1494页

作者： jorge Pascual-Guerra JoséA.Rodríguez-Navarro Carlos L.Paíno Service of Neurobiology-Research Ramón y Cajal University Hospital-IRYCISMadridSpain Department of Cellular Biology Complutense UniversityMadridSpain

Cell replacement therapy has long been proposed as a treatment for the damaged nervous *** of the most challenging aspects of such a strategy,however,is finding sources of donor cells for *** neural cells are rarely an option as every cell in the nervous system has a defined function that would be lost if that cell was to be *** possibility would be sourcing precursor or differentiated cells from fetal tissues;however,aside from ethical issues,heterologous cells are at risk of immunological rejection in the long *** improvements over the past 15 years have led to the possibility that autologous non-neural cells could be used for cell transplantation through their conversion into neural derivatives.

关键词： neural programming removed

Evaluation of vaccine rollout strategies for emerging infectious diseases:A model-based approach including protection attitudes

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Infectious Disease Modelling 2023年第4期8卷 1032-1049页

作者： Mauricio Paton Juan M.Acuna jorge Rodríguez Department of Chemical Engineering College of EngineeringKhalifa UniversitySAN Campus PO Box 127788Abu DhabiUnited Arab Emirates Department of Epidemiology and Public Health College of Medicine.Khalifa UniversityPO Box 127788Abu DhabiUnited Arab Emirates

Vaccine allocation strategies become crucial during vaccine shortages,especially in the face of potential outbreaks of new infectious diseases,as witnessed during the COVID-19 *** address this,a specialized compartmental model is created,which simulates an emerging infectious disease similar to *** model divides the population into different age groups and is used to compare various vaccine prioritisation approaches,aiming to minimize the total number of *** model is an improvement upon previous ones as it incorporates essential behavioural factors and is adapted to account for the protective effects of vaccination against both disease infection and *** takes into account human behaviors such as mask-wearing and social distancing by utilizing specific parameters related to self-protection,awareness levels,and the frequency of daily person-to-person interactions within each age ***,a novel method for dynamic vaccine prioritisation was introduced in this *** approach is model-independent and relies on the dynamic R *** is the first time such a method has been developed,offering a decision-making approach that is not tied to any specific *** innovation provides a flexible and adaptable strategy for determining vaccine priorities based on real-time data and the current state of the *** findings reveal crucial insights into vaccine allocation *** the daily rollout rates are fast(0.75%or higher)and children are eligible for vaccination,prioritising groups with high daily person-to-person interactions can lead to substantial reductions in total fatalities(up to approximately 40%lower).On the other hand,if rollout rates are slower and overall vaccination coverage is high,focusing on vaccinating elders emerges as the most effective strategy,resulting in up to approximately 10%fewer ***,the scenario changes significantly when children are not eligible for vaccination

关键词： behaviour slower utilizing

Inferior vena cava filter misplacement with svC perforation

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Journal of Interventional Medicine 2023年第3期6卷 140-142页

作者： Alexis Eliseo Santos Rodríguez jorge Lopera Civil Hospital of Morelia Dr.Miguel Silva Mexico The University of Texas Health Science Center at San Antonio USA

*** The use of inferior vena cava(IVC)filters had been increasingly growing in the last few *** Food and Drug Administration(FDA)approved the use of retrieval filters,so they can be removed once the risk of venous thromboembolism has *** commits the interventional radiologist in knowing the retrieval techniques and how to manage a complex retrieval process,even though the retrieval rates remain significantlylow.

关键词： removed retrieval vena

Conformable and Caputo’s Derivatives in Generalized Viscoelastic Models

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Applied Mathematics 2023年第9期14卷 580-601页

作者： jorge Fujioka Rosalío Fernando Rodríguez Áurea Espinosa-Cerón Instituto de Física Dpto. de Sistemas Complejos Universidad Nacional Autónoma de México Ciudad de México México Facultad de Ciencias Universidad Nacional Autónoma de México Ciudad de México México

We study two generalized versions of a system of equations which describe the time evolution of the hydrodynamic fluctuations of density and velocity in a linear viscoelastic fluid. In the first of these versions, the time derivatives are replaced by conformable derivatives, and in the second version left-handed Caputo’s derivatives are used. We show that the solutions obtained with these two types of derivatives exhibit significant similarities, which is an interesting (and somewhat surprising) result, taking into account that the conformable derivatives are local operators, while Caputo’s derivatives are nonlocal operators. We also show that the solutions of the generalized systems are similar to the solutions of the original system, if the order α of the new derivatives (conformable or Caputo) is less than one. On the other hand, when α is greater than one, the solutions of the generalized systems are qualitatively different from the solutions of the original system.

关键词： Conformable Derivatives Caputo’s Derivatives Fractional Derivatives Viscoelastic Fluids Hydrodynamic Fluctuations

Mobility Habitus in the Literature From 2020 to 2024

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Journalism and Mass Communication 2024年第2期14卷 53-62页

作者： María del Rosario Molina González Cruz García Lirios Julio E Crespo Isabel Cristina Rincón Rodríguez jorge Enrique Chaparro Medina Francisco Rubén Sandoval Vázquez Enrique Martínez Muñoz JoséAlfonso Aguilar Fuentes Alfredo Barrera Escobar Universidad de Sonora NavojoaMéxico Universidad de la Salud Ciudad de MexicoMéxico Universidad de Los Lagos OsornoChile Universidad de Santander UDES BucaramangaColombia Universidad de Investigación y Desarrollo UDI BucaramangaColombia Universidad Autónoma del Estado de Morelos CuernavacaMéxico Universidad Autónoma del Estado de Hidalgo PachucaMéxico Universidad Autónoma del Estado de México HuehuetocaMéxico Universidad Fidel Velazquez EdomexMéxico

The objective of the present work is modeling the mobility habitus in the public transport system with low Co2 emission mechanics in the center of *** this sense,a documentary work was carried out with a review of sources indexed to national repositories,using the Delphi technique for the content analysis and the specification of the model.A study was conducted with a selection of 100 students to establish the reliability,linearity,sphericity,adequacy,and validity of an instrument from which a relationship of dependence between income and mobility habitus was *** limits of the search,selection,and processing of information are recognized,and it is recommended to extend the research to international repositories,as well as to employ a more sophisticated technique.

关键词： spatiality habitus capacities model complexity

Model-based evaluation of the COVID-19 epidemiological impact on international visitors during Expo 2020

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Infectious Disease Modelling 2022年第3期7卷 571-579页

作者： Mauricio Paton Farida Al-Hosani Anderson E.Stanciole Bashir Aden Andrey Timoshkin Amrit Sadani Omar Najim Cybill A.Cherian Juan M.Acuna jorge Rodríguez Department of Epidemiology and Public Health College of MedicineKhalifa UniversityPO Box 127788Abu DhabiUnited Arab Emirates Department of Chemical Engineering College of EngineeringKhalifa UniversitySAN CampusPO Box 127788Abu DhabiUnited Arab Emirates Research and Data Intelligence Support Center(RDISC) Khalifa UniversityPO Box 127788Abu DhabiUnited Arab Emirates Abu Dhabi Public Health Center Abu DhabiUnited Arab Emirates Department of Health Abu DhabiUnited Arab Emirates Abu Dhabi Health Services Company e SEHA PO Box 109090Abu DhabiUnited Arab Emirates

The impact of the COVID-19 pandemic on large events has been *** this work,an evaluation of the potential impact of international arrivals due to Expo 2020 in terms of potential COVID-19 infections from October 1st,2021,until the end of April 2022 in the United Arab Emirates is *** simulation results indicate that:(i)the vaccination status of the visitors appears to have a small impact on cases,this is expected as the small numbers of temporary visitors with respect to the total population contribute little to the herd immunity status;and(ii)the number of infected arrivals is the major factor of impact potentially causing a surge in cases countrywide with the subsequent hospitalisations and *** results indicate that the prevention of infected arrivals should take all precedence priority to mitigate the impact of international visitors with their vaccination status being of less relevance.

关键词： International travel COVID-19 infections Infectious diseases