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iCEMIGE: Integration of CEll-morphometrics, MIcrobiome, and GEne biomarker signatures for risk stratification in breast cancers

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World Journal of Clinical Oncology 2022年第7期13卷 616-629页

作者： Xuan-Yu Mao jesus perez-losada Mar Abad Marta Rodríguez-González Cesar A Rodríguez Jian-Hua Mao Hang Chang Division of Biological Systems and Engineering Lawrence Berkeley National LaboratoryBerkeley94720United States Instituto de Biología Molecular y Celular del Cáncer Universidad de SalamancaSalamanca 37007Spain Department of Pathology Universidad de SalamancaSalamanca 37007Spain Department of Medical Oncology Universidad de SalamancaSalamanca 37007Spain

BACKGROUND The development of precision medicine is essential for personalized treatment and improved clinical outcome,whereas biomarkers are critical for the success of precision *** To investigate whether iCEMIGE(integration of CEll-morphometrics,MIcro-biome,and GEne biomarker signatures)improves risk stratification of breast cancer(BC)*** We used our recently developed machine learning technique to identify cellular morphometric biomarkers(CMBs)from the whole histological slide images in The Cancer Genome Atlas(TCGA)breast cancer(TCGA-BRCA)*** Cox regression was used to assess whether cell-morphometrics prognosis score(CMPS)and our previously reported 12-gene expression prognosis score(GEPS)and 15-microbe abundance prognosis score(MAPS)were independent prognostic *** was built upon the sparse representation learning *** iCEMIGE scoring model performance was measured by the area under the receiver operating characteristic curve compared to CMPS,GEPS,or MAPS *** models were created to predict overall survival(OS)and progress-free survival(PFS)rates at 5-and 10-year in the TCGA-BRCA *** We identified 39 CMBs that were used to create a CMPS system in ***,GEPS,and MAPS were found to be significantly independently associated with *** then established an iCEMIGE scoring system for risk stratification of BC *** iGEMIGE score has a significant prognostic value for OS and PFS independent of clinical factors(age,stage,and estrogen and progesterone receptor status)and PAM50-based molecular ***,the iCEMIGE score significantly increased the power to predict OS and PFS compared to CMPS,GEPS,or MAPS *** Our study demonstrates a novel and generic artificial intelligence framework for multimodal data integration toward improving prognosis risk stratification of BC patients,which can be extended to other types of cancer.

关键词： Breast cancer Gene signature Microbiome signature Cellular morphometrics signature Multimodal data integration Prognosis

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MEC-based architecture for interoperable and trustworthy internet of moving things

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Digital Communications and Networks 2023年第1期9卷 270-279页

作者： jesus Sanchez-Gomez Rafael Marin-perez Ramon Sanchez-Iborra Miguel Angel Zamora Department of Information and Communications Engineering University of MurciaMurciaSpain Odin Solutions S.L. MurciaSpain University Center of Defense San Javier Air Force BaseMurciaSpain

The expansion of the Internet of Moving Things(IoMT)leads to limitless and continuous working playgrounds exploited by highly dynamic end *** requires the adoption of multi-Radio Access Technologies(RATs)-based strategies to provide IoMT units with ubiquitous *** this end,the development of secure bootstrapping and authentication mechanisms is necessary to permit the secure operation of end *** the transmission and power limitations of these elements,current cryptographic solutions do not address these stringent *** that reason,in the study we present a Multi-Access Edge Computing(MEC)-based endto-end architecture that enables an efficient and secure authentication and key agreement between end devices and network servers over heterogeneous resource-limited networks such as the Low Power Wide Area Networks(LPWANs).Our proposal is based on the Authentication,Authorization,and Accounting(AAA)architecture and the recent Internet Engineering Task Force initiatives Static Context Header Compression and Low-Overhead *** results obtained from experimental tests reveal the validity of the proposal as it enables constrained IoMT devices to gain IPv6 connectivity as well as performs end-to-end secure authentication with notable reliability and controlled latency.

关键词： Internet of moving things LPWAN Authentication LO-CoAP-EAP SCHC

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Impact of socioeconomic and health-related factors on consumption of homeopathic and natural remedies in Spain in 2006, 2011 and 2017

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Journal of Integrative Medicine 2022年第1期20卷 52-56页

作者： Jose Antonio Castilla-Jimena Isabel Ruiz-perez jesus Henares-Montiel Andalusian School of Public Health 1801J GranadaSpain Unit of Clinical Management of Preventive Medicine and Public Health and Occupational Medicine Puerto del Mar University Hospital11009 CadizSpain Consortium for Networked Biomedical Research in Epidemiology and Public Health 28029 MadridSpain Institute for Biosanitary Research(ibs.GRANADA) 18012 GranadaSpain

Objective: Complementary and alternative medicine use and type of use may be influenced by sociodemographic and economic determinants through which we could identify characteristics of patients with greater trend to use it. This paper aims to describe the changes in the consumption of homeopathic and natural remedies in Spain for three time points in order to discern changes in rate of consumption, associated factors and whether their use has been affected by a period of economic ***: This study utilized 2006, 2011 and 2017 cross-sectional data from the Spanish National Health Survey, a nationally representative survey of the population aged more than 15 years old and resident in Spain. Independent bivariate and multivariate descriptive analyses for each of the 3 years studied were ***: The rate of consumption of both homeopathic and natural remedies has decreased over the periods studied. In spite of this decrease, the consumer profile appears to remain stable over the three periods. The sociodemographic factors associated with their consumption were being female, being 30–64 years old, being separated/divorced, having higher education qualifications, being employed and belonging to a higher social class. Psychiatric morbidity, chronic health problems such as pain, mental health problems or malignant tumors, and absence of major cardiovascular events were the clinical factors ***: It can be concluded that beyond the economic situation, the use of homeopathic and natural remedies obeys to the needs of the patients related to their state of health and the response they receive from the health system. It may be that women have different needs and expectations of the healthcare system and, given this breach of expectations, seek remedy to alleviate their needs outside the system and conventional medicine.

关键词： Complementary and alternative medicine Homeopathic remedies Natural remedies Economic recession Gender differences

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FedIDS:a federated cloud storage architecture and satellite image delivery service for building dependable geospatial platforms

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International Journal of Digital Earth 2018年第7期11卷 730-751页

作者： J.L.Gonzalez-Compean Victor J.Sosa-Sosa Arturo Diaz-perez jesus Carretero Ricardo Marcelin-Jimenez Cinvestav-Tamulipas Ciudad VictoriaMexico ARCOS Research Group University Carlos IIIMadridSpain UAM Iztapalapa CDMX and associated to InfotecMexico

Earth observation satellites produce large amounts of images/data that not only must be processed and preserved in reliable geospatial platforms but also efficiently disseminated among partners/researchers for creating derivative products through collaborative *** can face up this challenge in a cost-effective manner by using cloud ***,outages and violations of integrity/confidentiality associated to this technology could *** article presents FedIDS,a suite of cloud-based components for building dependable geospatial *** Fed component enables organizations to build shared geospatial data infrastructure through federation of independent cloud resources to withstand outages,whereas IDS avoids violations of integrity/confidentiality of images/data in sharing information and collaboration workflows.A FedIDS prototype,deployed in Spain and Mexico,was evaluated through a study case based on a satellite imagery captured by a Mexican antenna and another based on a satellite imagery of a European observation *** acquisition,storage and sharing of images among users of the federation,the exchange of images between Mexican and Spanish sites and outage scenarios were *** evaluation revealed the feasibility,reliability and efficiency of FedIDS,in comparison with available solutions,in terms of performance,storage consume and integrity/confidentiality when sharing images/data in collaborative scenarios.

关键词： Satellite imagery Earth observation archives spatial data infrastructure collaborative workflows security reliability

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Gene Therapy of Cancer:Induction of Anti-Tumor Immunity

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Cellular & Molecular Immunology 2004年第2期1卷 105-111页

作者： jesus Prieto Division

Many malignancies lack satisfactory treatment and new therapeutic options are urgently *** therapy is a new modality to treat both inherited and acquired diseases based on the transfer of genetic material to the *** gene therapy strategies against cancers have been developed.A considerable number of preclinical studies indicate that a great variety of cancers are amenable to gene *** these strategies, induction of anti-tumor immunity is the most promising *** therapy with cytokines has reached unprecedented success in preclinical models of *** rather than additive effects have been demonstrated by combination of gene transfer of cytokines/chemokines,costimulatory molecules or adoptive cell *** progress in vector technology and in imaging techniques allowing in vivo assessment of gene expression will facilitate the development of clinical applications of gene therapy,a procedure which may have a notorious impact in the management of cancers lacking effective *** & Molecular Immunology.2004;1(2):105-111.

关键词： gene therapy anti-tumor immunity cytokines costimulatory molecules dendritic cell

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ISCHEMIA trial:How to apply the results to clinical practice

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World Journal of Cardiology 2021年第8期13卷 237-242页

作者： Rafael Vidal-perez Alberto Bouzas-Mosquera jesus Peteiro Jose Manuel Vazquez-Rodriguez Servicio de Cardiologia Unidad de Imagen y Funcion CardiacaComplexo Hospitalario Universitario A Coruna(CHUAC)Centro de Investigacion Biomedica en Red(CIBERCV)-Instituto de Salud Carlos IIIA Coruna 15006Spain Servicio de Cardiología Complexo Hospitalario Universitario A CoruñaA Coruña 15006Spain

During the last years two questions have been continuously asked in chronic coronary syndromes:(1)Do revascularization procedures(coronary artery bypass grafting or percutaneous coronary intervention)really improve symptoms of angina?and(2)Do these techniques improve outcomes,*** they prevent new myocardial infarction events and cardiovascular death?Therefore,there was a need for a large definitive *** study was the ISCHEMIA trial,a large,multicentric trial sponsored by the National Heart,Lung,and Blood *** main trial compared coronary revascularization and optimal medical treatment(OMT)vs OMT alone in 5179 patients enrolled after a stress *** a median 3.2-year follow-up,318 primary outcome events occurred;the adjusted hazard ratio for the invasive strategy as compared with the conservative strategy was 0.93(95%confidence interval 0.80-1.08,P=0.34).The ISCHEMIA trial deeply disrupted many of our prior attitudes regarding management strategies for patients with stable coronary artery *** findings underscore the benefits of disease-modifying OMT for stable coronary artery disease *** main purposes of ischemia assessment before this trial were:Diagnostic purposes,assessment of outcome,and adding to decision-making ***,this changed after the trial *** results of ISCHEMIA might challenge the current diagnostic approach for stable angina patients recommended in the last European Society of Cardiology guidelines on chronic coronary disease that were based on studies published before the ISCHEMIA *** this editorial we propose our approach based on the ISCHEMIA study and the pretest probability for a positive test in patients with chronic coronary syndromes.

关键词： Stable angina Chronic coronary syndrome ISCHEMIA Stress testing Therapy Diagnosis

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Integrating Levels of Hierarchical Organization in Porous Organic Molecular Materials

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Nano-Micro Letters 2024年第5期16卷 134-153页

作者： jesus Ferrando‑Soria Antonio Fernandez Instituto de Ciencia Molecular(ICMol) Universidad de Valencia46980 ValenciaSpain School of Science Loughborough UniversityLoughborough LE113TUUK

Porous organic molecular materials(POMMs)are an emergent class of molecular-based materials characterized by the formation of extended porous frameworks,mainly held by non-covalent *** represent a variety of chemical families,such as hydrogen-bonded organic frameworks,porous organic salts,porous organic cages,C-H···πmicroporous crystals,supramolecular organic frameworks,π-organic frameworks,halogen-bonded organic framework,and intrinsically porous molecular *** some porous materials such as zeolites and metal organic frameworks,the integration of multiscale has been adopted to build materials with multifunctionality and optimized ***,considering the significant role of hierarchy in porous materials and the growing importance of POMMs in the realm of synthetic porous materials,we consider it appropriate to dedicate for the first time a critical review covering both ***,we will provide a summary of literature examples showcasing hierarchical POMMs,with a focus on their main synthetic approaches,applications,and the advantages brought forth by introducing hierarchy.

关键词： Porous organic molecular materials Hierarchy Hydrogen-bonded organic frameworks Porous cages Fullerene

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The Various Description of Biodiversity in Compulsory Education Textbooks

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Journal of Life Sciences 2011年第10期5卷 856-862页

作者： Maria-jesus Fuentes Silveira Susana Garcia Barros Cristina Martinez losada IES Monte Castelo （High School） Burela 27880 Spain Department of Pedagogy and Didactic University of A Coruha 4 Coruna 15071 Spain

We intend to establish how species diversity is dealt with, within the study of the ecosystem, in books for the 4th year of Compulsory Secondary Education, ESO （15-16 year-old students）. The analysis was carried out using a key issues dossier based on school science, which not only provides a description of reality, but also introduces a theoretical explanatory framework. Regarding species diversity, we focused on the descriptive approach, considering the link between diversity and trophic relationships, ecological succession and ecosystem stability through change, consequences for biodiversity of human activities and mechanisms to face such consequences; and on the explanatory perspective, which provides an interpretative answer for all the aspects previously mentioned. The findings drawn from textbooks show that biodiversity is linked both to the study of the ecosystem and to the impact of human societies on its maintenance. However, such study is particularly focused on the descriptive, rather than on the explanatory level. So, teachers should improve the study of biodiversity foresting a balance between descriptive and explanatory level.

关键词： Biodiversity textbooks secondary education human activity ecosystem.

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Effect of magnesium on the aluminothermic reduction rate of zinc oxide obtained from spent alkaline battery anodes for the preparation of Al–Zn–Mg alloys

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International Journal of Minerals,Metallurgy and Materials 2016年第4期23卷 458-465页

作者： Rocio Ochoa Alfredo Flores jesus Torres Cinvestav-Saltillo

The aluminothermic reduction of zinc oxide（ZnO） from alkaline battery anodes using molten Al may be a good option for the elaboration of secondary 7000-series alloys. This process is affected by the initial content of Mg within molten Al, which decreases the surface tension of the molten metal and conversely increases the wettability of ZnO particles. The effect of initial Mg concentration on the aluminothermic reduction rate of ZnO was analyzed at the following values： 0.90wt%, 1.20wt%, 4.00t%, 4.25wt%, and 4.40wt%. The ZnO particles were incorporated by mechanical agitation using a graphite paddle inside a bath of molten Al maintained at a constant temperature of 1123 K and at a constant agitation speed of 250 r/min, the treatment time was 240 min and the ZnO particle size was 450？500 mesh. The results show an increase in Zn concentration in the prepared alloys up to 5.43wt% for the highest initial concentration of Mg. The reaction products obtained were characterized by scanning electron microscopy and X-ray diffraction, and the efficiency of the reaction was measured on the basis of the different concentrations of Mg studied.

关键词： aluminothermic reduction alkaline batteries zinc oxide waste utilization aluminum zinc magnesium alloys

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The Full Multi-wake Vortex Lattice Method:a detached flow model based on Potential Flow Theory

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Advances in Aerodynamics 2023年第1期5卷 452-477页

作者： jesus Carlos Pimentel-Garcia The School of Industrial Aerospace and Audiovisual Engineering of Terrassa(ESEIAAT)Polytechnic University of CataloniaTerrassa 08222Spain

One of the main issues concerning the standard Vortex Lattice Method is its application to partially or fully detached flow conditions,where non-linear aerodynamic characteristics appear as the angle of attack increases and/or the aspect ratio *** order to solve such limitations,a pure numerical approach based entirely on the Vortex Lattice Method concepts has been *** so-called steady“Full Multi-wake Vortex Lattice Method”comes from the main hypothesis that each discretized element on the body’s surface detaches their own wakes *** obtained results match for lift,drag and moment coefficients for the entire aspect ratio range configurations(under straight wakes and inviscid assumptions).Future unsteady versions of such a multi-wake approach could improve the current results obtained through Vortex Element Methods(as vortons or isolated vortex filaments).

关键词： Potential Flow Theory Ideal flow Detached flow Vorticity generation Vortex Lattice Method Kutta condition

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