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Fungal Diversity 2012年第5期56卷 145-156页

作者： jariya sakayaroj Sita Preedanon Satinee Suetrong Anupong Klaysuban E.B.Gareth Jones Tsutomu Hattori National Center for Genetic Engineering and Biotechnology(BIOTEC) 113 Thailand Science ParkPhahonyothin RoadKhlong NuengKhlong LuangPathum Thani 12120Thailand Kansai Research Center Forestry and Forest Products Research InstituteNagai-Kyutaro 68MomoyamaFushimi-kuKyoto 612-0855Japan

This study reports the frequency of decay(stem/butt rot)of Xylocarpus granatum trees at Hat Khanom-Mu Ko Thale Tai National Park,Nakhonsithammarat province,and other locations in Thailand,and the identification of purported causal basidiomycetes based on morphological and molecular analyses.Four survey plots at Hat KhanomMu Ko Thale Tai National Park were established and the incidence of butt rot determined.Percentage stem/butt rot incidence of X.granatum trees varied from 40.9 to 94.4%with an average of 85.5%along all four Plots.Trees in Plot 2 supported the heaviest incidence rate(94.4%),with the lowest rate in Plot 3(40.9%).Ninety-two basidiomes were collected,and 46 fungal strains(50%)isolated into axenic culture,the majority associated with tree roots(68.5%of all collections)with 31.5%from the tree trunks.Molecular results,based on LSU and ITS1,2,5.8 S rDNA analyses,confirmed that all samples belonged to the poroid genus Fulvifomes in the Hymenochaetaceae within the Hymenochaetales,Basidiomycota.The 43 specimens sequenced grouped into three clades;one clade comprised specimens isolated from only the trunks and branches(14 strains),while the remainders were from roots(29 strains)and shown to be salt tolerant.The stem/butt rot strains formed unique phylotypes which did not group with other known Fulvifomes species.

关键词： Butt rot Fulvifomes Mangrove Phellinus Stem rot Xylocarpus

Classification of marine Ascomycota,Basidiomycota,Blastocladiomycota and Chytridiomycota

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Fungal Diversity 2015年第4期73卷 1-72页

作者： E.B.Gareth Jones Satinee Suetrong jariya sakayaroj Ali H.Bahkali Mohamed A.Abdel-Wahab Teun Boekhout Ka-Lai Pang Department of Botany and Microbiology College of ScienceKing Saud UniversityP.O.Box:2455Riyadh 1145Saudi Arabia Fungal Biodiversity Laboratory BIOTECNational Science and Technology Development Agency(NSTDA)113 Thailand Science ParkThanon PhahonyothinTombon Khlong NuengAmphoe Khlong LuangPathum Thani 12120Thailand Department of Botany Faculty of ScienceSohag UniversitySohagEgypt CBS Fungal Biodiversity Centre(KNAW) Uppsalalaan 83584CT UtrechtThe Netherlands Institute of Marine Biology and Center of Excellence for the Oceans Taiwan Ocean University2 Pei-Ning RoadKeelung 20224TaiwanRepublic of China

This paper lists the accepted names and classification of marine fungi,updating the scheme presented in 2009.The classification includes 1,112 species(in 472 genera):Ascomycota 805(in 352 genera),Basidiomycota 21 species(in 17 genera),Chytridiomycota and related phyla 26 species(in 13 genera),Zygomycota three(in two genera),Blastocladiomycota one species(one genus),asexual morphs of filamentous fungi 43(in 26 genera);and marine yeasts:Ascomycota 138 species(in 35 genera),Basidiomycota 75 species(in 26 genera).These fungi belong to 129 families and 65 orders.The Halosphaeriaceae remains the largest family of marine fungi with 141 species in 59 genera,while the most specious genera are Aspergillus(47 species),Penicillium(39 species)and the yeast genus Candida(64 species).The review includes details of recent higher order nomenclature changes,and accounts of new families,genera and species described over the past 5 years.

关键词： Fungal classification Marine fungi Molecular phylogeny New taxa Praelongicaulis gen nov Tirisporellales Torpedosporales ordo nov

An online resource for marine fungi

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Fungal Diversity 2019年第3期96卷 347-433页

作者： E.B.Gareth Jones Ka-Lai Pang Mohamed A.Abdel-Wahab Bettina Scholz Kevin D.Hyde Teun Boekhout Rainer Ebel Mostafa E.Rateb Linda Henderson jariya sakayaroj Satinee Suetrong Monika C.Dayarathne Vinit Kumar Seshagiri Raghukumar K.R.Sridhar Ali H.A.Bahkali Frank H.Gleason Chada Norphanphoun Deptartment of Botany and Microbiology College of ScienceKing Saud UniversityP.O Box 2455Riyadh 11451Kingdom of Saudi Arabia Hampshire UK Institute of Marine Biology and Centre of Excellence for the Oceans Taiwan Ocean University2 Pei-Ning RoadKeelung 20224TaiwanChina Department of Botany and Microbiology Faculty of ScienceSohag UniversitySohag 82524Egypt BioPol ehf Marine BiotechnologyEinbuastig 2545 SkagastrondIceland Center of Excellence in Fungal Diversity Mae Fah Luang University 333 M.1 ThasudMuang Chiang RaiChiang Rai 57100Thailand Westerdijk Fungal Biodiversity Institute Uppsalalaan 8UtrechtThe Netherlands Institute of Biodiversity and Ecological Dynamics(IBED) University of AmsterdamAmsterdamThe Netherlands Department of Chemistry Marine Biodiscovery CentreUniversity of AberdeenAberdeen AB243UEUK School of Computing Engineering&Physical SciencesUniversity of the West of ScotlandPaisley PA12BEUK School of Life and Environmental Sciences University of SydneyMacleay Building A12SydneyNSW 2006Australia School of Science Walailak University222 ThaiburiThasala DistrictNakhon Si Thammarat 80161Thailand Fungal Biodiversity Laboratory(BFBD) National Center for Genetic Engineering and Biotechnology(BIOTEC)113 Thailand Science ParkPhaholyothin RoadKhlong NuengKhlong LuangPathum Thani 12120Thailand Tamra' 313(Plot No.162)Vainguinnim ValleyDona PaulaGoa 403004India Department of Biosciences Mangalore UniversityMangaloreKarnatakaIndia School of Life and Environmental Sciences University of SydneySydneyNSW 2006Australia Department of Entomology and Plant Pathology Faculty of AgricultureChiang Mai UniversityHuay Keaw RoadSuthepMuang DistrictChiang Mai 50200Thailand

Index Fungorum,Species Fungorum and MycoBank are the key fungal nomenclature and taxonomic databases that can be sourced to find taxonomic details concerning fungi,while DNA sequence data can be sourced from the NCBI,EBI and UNITE databases.Nomenclature and ecological data on freshwater fungi can be accessed on http://fungi.***.illinois.edu/,while http://***/provides a comprehensive list of names of marine organisms,including information on their synonymy.Previous websites however have little information on marine fungi and their ecology,beside articles that deal with marine fungi,especially those published in the nineteenth and early twentieth centuries may not be accessible to those working in third world countries.To address this problem,a new website *** was set up and is introduced in this paper.This website provides a search facility to genera of marine fungi,full species descriptions,key to species and illustrations,an up to date classification of all recorded marine fungi which includes all fungal groups(Ascomycota,Basidiomycota,Blastocladiomycota,Chytridiomycota,Mucoromycota and fungus-like organisms e.g.Thraustochytriales),and listing recent publications.Currently,1257 species are listed in the marine fungi website(***),in 539 genera,74 orders,168 families,20 classes and five phyla,with new taxa continuing to be described.The website has curators with specialist mycological expertise who help to provide update data on the classification of marine fungi.This article also reviews knowledge of marine fungi covering a wide range of topics:their higher classification,ecology and world distribution,role in energy transfer in the oceans,origin and new chemical structures.An updated classification of marine fungi is also included.We would like to invite all mycologists to contribute to this innovative website.

关键词： Fungal classification marine fungi website High-throughput sequencing techniques Fungal diversity Origin of marine fungi

Notes for genera:Ascomycota

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Fungal Diversity 2017年第5期86卷 1-594页

作者： Nalin N.Wijayawardene Kevin D.Hyde Kunhiraman C.Rajeshkumar David L.Hawksworth Hugo Madrid Paul M.Kirk Uwe Braun Rajshree V.Singh Pedro W.Crous Martin Kukwa Robert Lücking Cletus P.Kurtzman Andrey Yurkov Danny Haelewaters Andre´Aptroot H.Thorsten Lumbsch Einar Timdal Damien Ertz Javier Etayo Alan J.L.Phillips Johannes Z.Groenewald Moslem Papizadeh Laura Selbmann Monika C.Dayarathne Gothamie Weerakoon E.B.Gareth Jones Satinee Suetrong Qing Tian Rafael F.Castanda-Ruiz Ali H.Bahkali Ka-Lai Pang Kazuaki Tanaka Dong Qin Dai jariya sakayaroj Martina Hujslová Lorenzo Lombard Belle D.Shenoy Ave Suija Sajeewa S.N.Maharachchikumbura Kasun M.Thambugala Dhanushka N.Wanasinghe Bharati O.Sharma Subhash Gaikwad Gargee Pandit Laura Zucconi Silvano Onofri Eleonora Egidi Huzefa A.Raja Rampai Kodsueb Marcela E.S.Caceres Sergio Perez-Ortega Patrícia O.Fiuza Josiane Santana Monteiro Larissa N.Vasilyeva Roger G.Shivas Maria Prieto Mats Wedin Ibai Olariaga Adebola Azeez Lateef Yamini Agrawal Seyed Abolhassan Shahzadeh Fazeli Mohammad Ali Amoozegar Guo Zhu Zhao Walter P.Pfliegler Gunjan Sharma Magdalena Oset Mohamed A.Abdel-Wahab Susumu Takamatsu Konstanze Bensch Nimali Indeewari de Silva AndréDe Kesel Anuruddha Karunarathna Saranyaphat Boonmee Donald H.Pfister Yong-Zhong Lu Zong-Long Luo Nattawut Boonyuen Dinushani A.Daranagama Indunil C.Senanayake Subashini C.Jayasiri Milan C.Samarakoon Xiang-Yu Zeng Mingkwan Doilom Luis Quijada Sillma Rampadarath Gabriela Heredia Asha J.Dissanayake Ruvishika S.Jayawardana Rekhani H.Perera Li Zhou Tang Chayanard Phukhamsakda Margarita Hernańdez-Restrepo Xiaoya Ma Saowaluck Tibpromma Luis F.P.Gusmao Darshani Weerahewa Samantha C.Karunarathna Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Mushroom Research Foundation 128 M.3 Ban Pa Deng T.Pa PaeA.Mae TaengChiang Mai 50150Thailand National Fungal Culture Collection of India(NFCCI) Biodiversity and Palaeobiology(Fungi)GroupAgharkar Research InstitutePuneMaharashtra 411004India Royal Botanic Gardens KewRichmondSurrey TW93DSUK Department of Life Sciences The Natural History MuseumCromwell RoadLondon SW75BDUK Jilin Agricultural University Changchun 130118JilinPeople’s Republic of China Centro de Geno´mica y Bioinforma´tica Facultad de CienciasUniversidad Mayor de ChileCamino La Pira´mide 5750HuechurabaSantiagoChile Martin-Luther-Universita¨t Institut fu¨r BiologieBereich Geobotanik und Botanischer GartenHerbariumNeuwerk 2106099 Halle(Saale)Germany Westerdijk Fungal Biodiversity Institute Uppsalalaan 83584 CT UtrechtThe Netherlands Department of Plant Taxonomy and Nature Conservation Faculty of BiologyUniversity of Gdan´skWita Stwosza 5980-308 Gdan´skPoland Botanic Garden and Botanical Museum Königin-Luise-Str.6-814195 BerlinGermany Mycotoxin Prevention and Applied Microbiology Research Unit National Center for Agricultural Utilization ResearchAgricultural Research ServiceU.S.Department of AgriculturePeoriaIL 61604USA Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures Inhoffenstraße 7B38124 BrunswickGermany Farlow Reference Library and Herbarium of Cryptogamic Botany Harvard University22 Divinity AvenueCambridgeMA 02138USA Department of Organismic and Evolutionary Biology Harvard University22 Divinity AvenueCambridgeMA 02138USA ABL Herbarium G.v.d.Veenstraat 1073762 XK SoestThe Netherlands Science&Education The Field Museum1400

Knowledge of the relationships and thus the classification of fungi,has developed rapidly with increasingly widespread use of molecular techniques,over the past 10–15 years,and continues to accelerate.Several genera have been found to be polyphyletic,and their generic concepts have subsequently been emended.New names have thus been introduced for species which are phylogenetically distinct from the type species of particular genera.The ending of the separate naming of morphs of the same species in 2011,has also caused changes in fungal generic names.In order to facilitate access to all important changes,it was desirable to compile these in a single document.The present article provides a list of generic names of Ascomycota(approximately 6500 accepted names published to the end of 2016),including those which are lichen-forming.Notes and summaries of the changes since the last edition of‘Ainsworth&Bisby’s Dictionary of the Fungi’in 2008 are provided.The notes include the number of accepted species,classification,type species(with location of the type material),culture availability,life-styles,distribution,and selected publications that have appeared since 2008.This work is intended to provide the foundation for updating the ascomycete component of the"Without prejudice list of generic names of Fungi"published in 2013,which will be developed into a list of protected generic names.This will be subjected to the XIXth International Botanical Congress in Shenzhen in July 2017 agreeing to a modification in the rules relating to protected lists,and scrutiny by procedures determined by the Nomenclature Committee for Fungi(NCF).The previously invalidly published generic names Barriopsis,Collophora(as Collophorina),Cryomyces,Dematiopleospora,Heterospora(as Heterosporicola),Lithophila,Palmomyces(as Palmaria)and Saxomyces are validated,as are two previously invalid family names,Bartaliniaceae and Wiesneriomycetaceae.Four species of Lalaria,which were invalidly published are transferred to Taphrina and validated as new combinat

关键词： Article 59 Classification One name Pleomorphic fungi Taxonomy

Occurrence and geographical distribution of mangrove fungi

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Fungal Diversity 2021年第1期106卷 137-227页

作者： B.Devadatha E.B.G.Jones K.L.Pang M.A.Abdel-Wahab K.D.Hyde J.sakayaroj A.H.Bahkali M.S.Calabon V.V.Sarma S.Sutreong S.N.Zhang Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Institute of Plant Health Zhongkai University of Agriculture and EngineeringHaizhu DistrictGuangzhou 510225People’s Republic of China Department of Botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia Institute of Marine Biology and Centre of Excellence for the Oceans National Taiwan Ocean University2 Pei-NingRoadKeelung 20224TaiwanROC Department of Botany and Microbiology Faculty of ScienceSohag UniversitySohag 82524Egypt School of Science Walailak University222 ThaiburiThasala DistrictNakhon Si Thammarat 80161Thailand Department of Biotechnology School of Life SciencesPondicherry UniversityKalapetPondicherry 605014India National Biobank of Thailand(NBT) National Science and Technology Development Agency(NSTDA)111 Thailand Science ParkThanon PhahonyothinTambon Khlong NuengAmphoe Khlong LuangPathum Thani 12120Thailand

This is a multidimensional review of mangrove fungi occurring as saprobes,pathogens and endophytes of a wide range of host substrates and those isolated from the water columns and sediments in mangroves.Eight-hundred and fifty taxa including 658 that are supported by both morphology and molecular data and 192 with only morphological data are listed.These constitute Ascomycota,the dominant group with 773 species,and 58 Basidiomycota,one Blastocladiomycota,five Chytridiomycota,and 13 Mucoromycota.This study also includes data on mangrove yeasts 103 Ascomycota,39 Basidi-omycota and 193 taxa isolated from sediments.Endophytes isolated from submerged parts of mangrove plants total 38.The most specious orders of mangrove fungi are Pleosporales 133,Saccharomycetales 102,Microascales 101,Eurotiales 87,Hypocreales 60 and Xylariales 54.Speciose genera include Candida 39,Aspergillus 53,Penicillium 17 and Corollospora 16.The highest number of mangrove fungi have been recorded from the Pacific Ocean 553,which is the largest ocean,followed by Indian 408 and Atlantic Oceans 259.Geographical distribution of mangrove fungi varied from ocean to ocean with only 109 taxa common to the Atlantic,Indian and Pacific Oceans.Of the various countries reported for mangrove fungi,India accommodates the highest number(339)followed by Thailand 303,Malaysia 171,Florida Everglades,USA 134 and Brunei 134.A total of 60 different mangrove plants and their associates have been surveyed for mangrove fungi.These results are discussed and compared with previous studies.

关键词： Host preference Marine ecology Marine fungi World distribution