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Knock-in of exogenous sequences based on CRISPR/Cas9 targeting autosomal genes and sex chromosomes in the diamondback moth,Plutella xylostella

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Journal of Integrative Agriculture 2024年第9期 3089-3103页

作者： Shanyu Li Guifang Lin Haoqi Wen Haiyan Lu Anyuan Yin Chanqin Zheng Feifei Li Qingxuan Qiao Lu Jiao Ling Lin Yi Yan Xiujuan Xiang huang liao Huiting Feng Yussuf Mohamed Salum Minsheng You Wei Chen Weiyi He State Key Laboratory for Ecological Pest Control of Fujian and Taiwan Crops/Ministerial and Provincial Joint Innovation Centre for Safety Production of Cross-Strait Crops/International Joint Research Laboratory of Ecological Pest Control Ministry of EducationInstitute of Applied EcologyFujian Agriculture and Forestry University Ganzhou Key Laboratory of Greenhouse Vegetable Gannan Normal University

Genetic pest control strategies based on precise sex separation and only releasing sterile males can be accomplished by site-specific genome editing. In the current study, we showed that the mutation of single-allele Pxfl(2)d can significantly impair the normal mating behavior and testis development in male adults of the notorious cruciferous insect pest Plutella xylostella, in addition to its known functions in the ovarian development in female adults and egg hatching. Subsequent CRISPR/Cas9-based knock-in experiments revealed that site-specific integration of an exogenous green fluorescent protein(GFP) gene into autosomal Pxfl(2)d for labelling mutants could be achieved. However, this gene is not a suitable target for GFP insertion to establish a genetically stable knock-in strain because of the severe decline in reproductive capacity. We further screened for the W-chromosomelinked and Z-chromosome-linked regions to test the knock-in efficiency mediated by CRISPR/Cas9. The results verified that both types of chromosomes can be targeted for the site-specific insertion of exogenous sequences. We ultimately obtained a homozygous knock-in strain with the integration of both Cas9 and cyan fluorescent protein(CFP) expression cassettes on a Z-linked region in P. xylostella, which can also be used for early sex detection. By injecting the sgRNA targeting Pxfl(2)d alone into the eggs laid by female adults of the Z-Cas9-CFP strain, the gene editing efficiency reached 29.73%, confirming the success of expressing a functional Cas9 gene. Taken together, we demonstrated the feasibility of the knock-in of an exogenous gene to different genomic regions in P. xylostella, while the establishment of a heritable strain required the positioning of appropriate sites. This study provides an important working basis and technical support for further developing genetic strategies for insect pest control.

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FHL2通过NF-κB信号通路调节THP-1巨噬细胞泡沫化

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基础医学与临床 2024年第2期44卷 204-209页

作者：陈卫卫廖煌史振鸿罗颖海南医学院第二附属医院心血管内科海南海口570216

目的明确4个半LIM结构域蛋白(FHL2)是否能够通过调节核因子κB(NF-κB)信号通路影响巨噬细胞泡沫化。方法构建FHL2过表达质粒及合成FHL2小干扰RNA(si-FHL2),分别转染至人单核/巨噬细胞系THP-1中,Western blot检测FHL2表达;使用氧化低... 详细信息

目的明确4个半LIM结构域蛋白(FHL2)是否能够通过调节核因子κB(NF-κB)信号通路影响巨噬细胞泡沫化。方法构建FHL2过表达质粒及合成FHL2小干扰RNA(si-FHL2),分别转染至人单核/巨噬细胞系THP-1中,Western blot检测FHL2表达;使用氧化低密度脂蛋白(ox-LDL)刺激细胞,ELISA检测细胞IL-6、IL-1β、TNF-α等细胞因子的表达;油红O染色检测细胞泡沫化程度;Western blot检测NF-κB信号通路相关蛋白表达。结果转染过表达FHL2质粒的细胞中FHL2表达量升高(P<0.01),而转染si-FHL2的细胞表达量降低(P<0.05);敲低FHL2能够下调炎性细胞因子的分泌(P<0.01);FHL2下调能够缓解THP-1巨噬细胞泡沫化;同时,FHL2下调抑制NF-κB信号通路的活化(P<0.05),而在过表达FHL2组中结果呈相反趋势。结论下调FHL2的表达可通过抑制NF-κB信号通路活化,降低炎性细胞因子的分泌,缓解巨噬细胞的泡沫化。

关键词： 4个半LIM结构域蛋白(FHL2) NF-κB信号通路 THP-1 巨噬细胞泡沫化

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HTDcr:a job execution framework for high-throughput computing on supercomputers

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Science China(Information Sciences) 2024年第1期67卷 69-85页

作者： Jiazhi JIANG Dan huang Hu CHEN Yutong LU Xiangke liao School of Computer Science and Engineering Sun Yat-sen University School of Software Engineering South China University of Technology

High-throughput computing(HTC) is a computing paradigm that aims to accomplish jobs by easily breaking them into smaller,independent ***,it requires a large amount of computing power for a long *** existing HTC frameworks are job-oriented without support for coscheduling with hardware architecture and task-level ***,most of the frameworks reach a limited scale,and their usability needs further ***,we present HTDcr,a job execution framework for the HTC on *** study aims to improve the throughput,task dispatching,and usability of the *** detail,the throughput optimizations include a sophisticated designed task management system,a hierarchical scheduler,and the co-optimization of the task-scheduling strategy with the application and hardware *** optimizations for usability include a programable execution workflow,mechanisms for more robust and reliable service qualities,and a fine-grained resource allocation system for the colocation of multiple *** to our evaluations,HTDcr can achieve outstanding scalability and high throughput on large-scale clusters for the HTC *** evaluate HTDcr with several microbenchmarks and real-world applications on Tianhe-2 and Sunway TaihuLight to demonstrate its effects on existing design *** instance,the task scheduling for two real-world applications integrated with the application and hardware characteristics achieves 1.7× and 1.9× speedups over the basic task-scheduling strategy.

关键词： high-throughput computing supercomputer task scheduling middleware password guessing

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Controllable image generation based on causal representation learning

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Frontiers of Information Technology & Electronic Engineering 2024年第1期25卷 135-148页

作者： Shanshan huang Yuanhao WANG Zhili GONG Jun liao Shu WANG Li LIU School of Big Data and Software Engineering Chongqing UniversityChongqing 401331China School of Materials and Energy Southwest UniversityChongqing 400715China

Artificial intelligence generated content(AIGC)has emerged as an indispensable tool for producing large-scale content in various forms,such as images,thanks to the significant role that AI plays in imitation and ***,interpretability and controllability remain *** AI methods often face challenges in producing images that are both flexible and controllable while considering causal relationships within the *** address this issue,we have developed a novel method for causal controllable image generation(CCIG)that combines causal representation learning with bi-directional generative adversarial networks(GANs).This approach enables humans to control image attributes while considering the rationality and interpretability of the generated images and also allows for the generation of counterfactual *** key of our approach,CCIG,lies in the use of a causal structure learning module to learn the causal relationships between image attributes and joint optimization with the encoder,generator,and joint discriminator in the image generation *** doing so,we can learn causal representations in image’s latent space and use causal intervention operations to control image *** conduct extensive experiments on a real-world dataset,*** experimental results illustrate the effectiveness of CCIG.

关键词： Image generation Controllable image editing Causal structure learning Causal representation learning

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FPR1 Antagonist (BOC-MLF) Inhibits Amniotic Epithelial-mesenchymal Transition

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Current Medical Science 2024年第1期44卷 187-194页

作者： Xiao-mei huang E liao Jun-qun liao Ya-ling LIU Yong SHAO Department of Obstetrics and Gynecology The First Affiliated Hospital of Chongqing Medical UniversityChongqing 400042China Department of Obstetrics Maternal and Child Health Hospital of Hubei ProvinceWuhan 430070China Medical Laboratory Science The First Affiliated Hospital of Chongqing Medical UniversityChongqing 400042China Department of Obstetrics Yubei Maternity and Child Healthcare HospitalChongqing 400042China

Objective:Premature rupture of membranes(PROM)is a common pregnancy disorder that is closely associated with structural weakening of fetal *** have found that formyl peptide receptor 1(FPR1)activates inflammatory pathways and amniotic epithelial-mesenchymal transition(EMT),stimulates collagen degradation,and leads to membrane weakening and membrane *** purpose of this study was to investigate the anti-inflammatory and EMT inhibitory effects of FPR1 antagonist(BOC-MLF)to provide a basis for clinical prevention of ***:The relationship between PROM,FPR1,and EMT was analyzed in human fetal membrane tissue and plasma samples using Western blotting,PCR,Masson staining,and ELISA ***(LPS)was used to establish a fetal membrane inflammation model in pregnant rats,and BOC-MLF was used to treat the LPS rat *** detected interleukin(IL)-6 in blood from the rat hearts to determine whether the inflammatory model was successful and whether the anti-inflammatory treatment was *** used electron microscopy to analyze the structure and collagen expression of rat fetal ***:Western blotting,PCR and Masson staining indicated that the expression of FPR1 was significantly increased,the expression of collagen was decreased,and EMT appeared in *** rat model indicated that LPS caused the collapse of fetal membrane epithelial cells,increased intercellular gaps,and decreased ***-MLF promoted an increase in fetal membrane collagen,inhibited EMT,and reduced the weakening of fetal ***:The expression of FPR1 in the fetal membrane of PROM was significantly increased,and EMT of the amniotic membrane was ***-MLF can treat inflammation and inhibit amniotic EMT.

关键词： formyl peptide receptor 1 BOC-MLF epithelial-mesenchymal transition premature rupture of membranes

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A bounding surface visco-plasticity model considering generalized spacing ratio of soils

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Journal of Rock Mechanics and Geotechnical Engineering 2024年第5期16卷 1832-1846页

作者： Xiaosen Kang Hongjian liao Qiangbing huang Jianbing Peng Department of Geological Engineering Chang’an UniversityXi’an710054China Department of Civil Engineering Xi’an Jiaotong UniversityXi’an710049China

The non-unique critical state of soils with time-dependent behaviors is a significant issue in geotechnical engineering ***,previous bounding surface plasticity models cannot predict accurately the non-unique critical state of soils,because the distance between the compression line and critical state line charged by strain-rate effect is basically *** fill this gap,a generalized spacing ratio of soils is defined in the elasto-viscoplastic framework,and a bounding surface visco-plasticity model is formulated and verified,which can consider the generalized spacing ***,the generalized spacing ratio of soils reflects the distance between the compression line and the critical state line of soils with time-dependent ***,the generalized spacing ratio is introduced into an improved anisotropic bounding surface.A new expression of the visco-plastic multiplier is derived by solving the consistency equation of an anisotropic bounding *** the expression,a strain rate index is proposed to account for the strain-rate effect on visco-plastic strain increment,and a visco-plastic hardening modulus is derived to predict the visco-plastic response of soils in overconsolidation *** model is then verified through constant strain rate tests and creep ***,it can capture the non-unique critical states of soils with time-dependent behaviors due to the generalized spacing ratio and the creep rupture of soils due to the visco-plastic multiplier that considers the stress ratio and visco-plastic strain rate.

关键词： Soil Constitutive model Visco-plastic behavior Strain rate Creep Anisotropic

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Microstructured Cantilever Probe on Optical Fiber Tip for Microforce Sensor

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Photonic Sensors 2024年第2期14卷 89-99页

作者： Famei WANG Changrui liao Mengqiang ZOU Dejun LIU Haoqiang huang Chao LIU Yiping WANG Shenzhen Key Laboratory of Ultrafast Laser Micro/Nano Manufacturing Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education/Guangdong ProvinceCollege of Physics and Optoelectronic EngineeringShenzhen UniversityShenzhen 518060China Shenzhen Key Laboratory of Photonic Devices and Sensing Systems for Internet of Things Guangdong and Hong Kong Joint Research Centre for Optical Fibre SensorsState Key Laboratory of Radio Frequency Heterogeneous IntegrationShenzhen UniversityShenzhen 518060China School of Electronics Science Northeast Petroleum UniversityDaqing 163318China

Benefiting from the great advances of the femtosecond laser two-photon polymerization(TPP)technology,customized microcantilever probes can be accurately 3-dimensional(3D)manufactured at the nanoscale size and thus have exhibited considerable potentials in the fields of microforce,micro-vibration,and microforce *** this work,a controllable microstructured cantilever probe on an optical fiber tip for microforce detection is demonstrated both theoretically and *** static performances of the probe are firstly investigated based on the finite element method(FEM),which provides the basis for the structural *** proposed cantilever probe is then 3D printed by means of the TPP *** experimental results show that the elastic constant k of the proposed cantilever probe can be actively tuned from 2.46N/m to 62.35N/*** force sensitivity is 2.5nm/μN,the Q-factor is 368.93,and the detection limit is ***,the mechanical properties of the cantilever probe can be flexibly adjusted by the geometric configuration of the ***,it has an enormous potential for matching the mechanical properties of biological samples in the direct contact mode.

关键词： Optical fiber sensor microforce sensing microstructured cantilever two-photon polymerization

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Heptamethine cyanines in bioorthogonal chemistry

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Chinese Chemical Letters 2024年第2期35卷 131-137页

作者： Yuanyuan liao Yuting Liang Yurou huang Xiaoyan Zeng Tian He Jun Yin National Key Laboratory of Green Pesticide International Joint Research Center for Intelligent Biosensor Technology and HealthCollege of ChemistryCentral China Normal UniversityWuhan 430079China

Due to their excellent fluorescence properties and biological function,cyanine dyes have been widely applied in biological *** cyanine(Cy7)dyes,as a type of classic near-infrared(NIR)fluorescent dyes,are considered as one of the effective fluorescent tools in the living organisms due to their good biocompatibility and very low background *** reactions performed in living cells and tissues have developed by leaps and bounds in recent *** NIR fluorescent labeling technique involving cyanine has attracted widespread *** review summarizes their recent application in the field of bioorthogonal imaging,mainly concluding Cy7-type dyes,labeling strategy,bioimaging application,*** expect this work can provide some helps for the studies of NIR bioorthogonal reaction in vivo.

关键词： Fluorescent probes Heptamethine cyanines Bioorthogonal reaction Imaging Cell

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Study on cumulative effects of biological craniocerebral trauma under repeated blast

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Theoretical & Applied Mechanics Letters 2024年第3期14卷 174-183页

作者： Xingyuan huang Bingchen Xia Lijun Chang Zhikang liao Hui Zhao Zhihua Cai Hunan Provincial Key Laboratory of Health Maintenance for Mechanical Equipment Hunan University of Science and TechnologyXiangtan 411201China School of Mechanical and Electrical Engineering Foshan UniversityFoshan 528231China Institute for Traffic Medicine PLA Army Characteristic Medical CenterChongqing 400042China

Repeated blast impacts on personnel in explosive environments can exacerbate craniocerebral *** existing studies focus on the injury effects of a single blast,lacking in-depth analysis on the injury effects and cumulative effects of repeated ***,rats were used as the experimental samples to suffer from explosion blasts with different peak air overpressures(167 kPa~482 kPa)and varying number of repeated *** cumulative effect of craniocerebral trauma was most pronounced for moderate repeated blast,showing approximately 95%increase of trauma severity with penta blast,and an approximately 85%increase of trauma severity with penta minor *** cumulative effect of craniocerebral trauma from severe,repeated blast has a smaller rate of change compared to the other two *** severity of trauma from penta blast increased by approximately 69%compared to a single *** physiological,pathological and biochemical analysis show that the degree of neurological trauma caused by repeated blasts is higher than that of single blasts,and the pathological trauma to brain tissue is more extensive and *** trauma degree remains unchanged after double blast,increases by one grade after triple or quadruple blast,and increases by two grades after penta blast.

关键词： Repeated blast Craniocerebral trauma Trauma severity grade Cumulative effects

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Distributed Secondary Control Based on Dynamic Diffusion Algorithm for Current Sharing and Average Voltage Regulation in DC Microgrids

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Journal of Modern Power Systems and Clean Energy 2024年第2期12卷 597-607页

作者： Dawei liao Fei Gao Daniel J.Rogers Wentao huang Dong Liu Houjun Tang Department of Electrical Engineering Shanghai Jiao Tong UniversityShanghaiChina Department of Engineering Science University of OxfordOxford OX12JDU.K. IEEE

This paper introduces a distributed secondary control scheme for achieving current sharing and average voltage regulation objectives in a DC *** proposed scheme employs a dynamic diffusion algorithm(DDA)instead of the consensus algorithm to enable distributed communication among *** help understand DDA,the relation of DDA and other diffusion algorithms is discussed in detail and its superiority is shown by comparison with diffusion and consensus ***,considering the discrete nature and different sampling time of the digital controller and communication network,a z-domain model of the entire DC microgrid is *** influence of communication and secondary control parameters on the system stability is *** on the established model,the tolerable communication rates are ***-time simulations conducted on the OPAL-RT platform validate the effectiveness of the proposed scheme,showcasing its advantages in terms of convergence speed and stability.

关键词： Cooperative control DC microgrid diffusion algorithm discrete-time modeling distributed secondary control

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