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Transcriptome sequencing reveals novel biomarkers and immune cell infiltration in esophageal tumorigenesis

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World Journal of Gastrointestinal Oncology 2024年第4期16卷 1500-1513页

作者： jian-rong Sun Dong-Mei Chen rong huang Rui-Tao Wang Li-Qun Jia School of Clinical Medicine Beijing University of Chinese MedicineBeijing 100029China Integrated Chinese and Western Medicine Oncology China-Japan Friendship HospitalBeijing 100029China

BACKGROUND Esophageal squamous cell carcinoma(ESCC)is one of the most common malignancies worldwide,and its development comprises a multistep process from intraepithelial neoplasia(IN)to carcinoma(CA).However,the critical regulators and underlying molecular mechanisms remain largely *** To explore the genes and infiltrating immune cells in the microenvironment that are associated with the multistage progression of ESCC to facilitate diagnosis and early *** A mouse model mimicking the multistage development of ESCC was established by providing warter containing 4-nitroquinoline 1-oxide(4NQO)to C57BL/6 ***,we established a control group without 4NQO treatment of ***,transcriptome sequencing was performed for esophageal tissues from patients with different pathological statuses,including low-grade IN(LGIN),high-grade IN(HGIN),and CA,and controlled normal tissue(NOR)*** expressed genes(DEGs)were identified in the LGIN,HGIN,and CA groups,and the biological functions of the DEGs were analyzed via Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment *** CIBERSORT algorithm was used to detect the pattern of immune cell ***(IHC)was also conducted to validate our ***,the Luminex multiplex cytokine analysis was utilized to measure the serum cytokine levels in the *** Compared with those in the NOR group,a total of 681541,and 840 DEGs were obtained in the LGIN,HGIN,and CA groups,*** the intersection of the three sets of DEGs,we identified 86 genes as key genes involved in the development of *** analysis revealed that these genes were enriched mainly in the keratinization,epidermal cell differentiation,and interleukin(IL)-17 signaling *** analysis revealed that,compared with those in the NOR group,M0 and M1 macrophages in the 4NQO group showed stronger infiltration,which was validated by *** cytok

关键词： Esophageal squamous cell carcinoma Intraepithelial neoplasia Tumorigenesis Transcriptome sequencing Biomarkers Immune cell infiltration 4-nitroquinoline 1-oxid

Empirical likelihood for spatial cross-sectional data models with matrix exponential spatial specification

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Applied Mathematics(A Journal of Chinese Universities) 2024年第1期39卷 125-139页

作者： LIU Yan rong jian-rong QIN Yong-song Nanning University Nanning 530200China Center for Applied Mathematics of Guangxi and College of Mathematics and Statistics Guangxi Normal UniversityGuilin 541004China

In this paper,we study spatial cross-sectional data models in the form of matrix exponential spatial specification(MESS),where MESS appears in both dependent and error *** empirical likelihood(EL)ratio statistics are established for the parameters of the MESS *** is shown that the limiting distributions of EL ratio statistics follow chi-square distributions,which are used to construct the confidence regions of model *** experiments are conducted to compare the performances of confidence regions based on EL method and normal approximation method.

关键词： MESS empirical likelihood con dence region

Establishing and clinically validating a machine learning model for predicting unplanned reoperation risk in colorectal cancer

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World Journal of Gastroenterology 2024年第23期30卷 2991-3004页

作者： Li-Qun Cai Da-Qing Yang rong-jian Wang He huang Yi-Xiong Shi Department of Colorectal and Anal Surgery Whenzhou Central HospitalWenzhou 325000Zhejiang ProvinceChina Department of Colorectal and Anorectal Surgery The First Affiliated Hospital of Wenzhou Medical UniversityWenzhou 325000Zhejiang ProvinceChina

BACKGROUND Colorectal cancer significantly impacts global health,with unplanned reoperations post-surgery being key determinants of patient *** predictive models for these reoperations lack precision in integrating complex clinical *** To develop and validate a machine learning model for predicting unplanned reoperation risk in colorectal cancer *** Data of patients treated for colorectal cancer(n=2044)at the First Affiliated Hospital of Wenzhou Medical University and Wenzhou Central Hospital from March 2020 to March 2022 were retrospectively *** were divided into an experimental group(n=60)and a control group(n=1984)according to unplanned reoperation *** were also divided into a training group and a validation group(7:3 ratio).We used three different machine learning methods to screen characteristic variables.A nomogram was created based on multifactor logistic regression,and the model performance was assessed using receiver operating characteristic curve,calibration curve,Hosmer-Lemeshow test,and decision curve *** risk scores of the two groups were calculated and compared to validate the *** More patients in the experimental group were≥60 years old,male,and had a history of hypertension,laparotomy,and hypoproteinemia,compared to the control *** logistic regression analysis confirmed the following as independent risk factors for unplanned reoperation(P<0.05):Prognostic Nutritional Index value,history of laparotomy,hypertension,or stroke,hypoproteinemia,age,tumor-node-metastasis staging,surgical time,gender,and American Society of Anesthesiologists *** operating characteristic curve analysis showed that the model had good discrimination and clinical *** This study used a machine learning approach to build a model that accurately predicts the risk of postoperative unplanned reoperation in patients with colorectal cancer,which can improve tr

关键词： Colorectal cancer Postoperative unplanned reoperation Unplanned reoperation Clinical validation Nomogram Machine learning models

Treatment of cryptococcal meningitis with low-dose amphotericin B and flucytosine

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Chinese Medical Journal 2012年第2期125卷 385-387页

作者： Yan Dong huang jian-rong Lian jiang-shan Li Lan-juan Zhejiang Univ Coll Med Affiliated Hosp 1 State Key Lab Diag & Treatment Infect Dis Hangzhou 310003 Zhejiang Peoples R China

Background Amphotericin B （0.7 mg/kg） with flucytosine is the standard treatment for cryptococcal ***,the long treatment course can induce adverse reactions in patients; therefore,reducing the dose may decrease such *** performed a retrospective analysis of treatment effects and adverse reactions when amphotericin B （0.4 mg/kg or 0.7 mg/kg per day） and flucytosine were used together to treat HIV-negative patients with cryptococcal *** Retrospective analysis was conducted on inpatients at the First Affiliated Hospital,College of Medicine,Zhejiang University （January 2005 to December 2009）.Low- or high-dose amphotericin B （0.4 or 0.7 mg/kg per day,respectively） plus flucytosine was *** negative conversion rate of Cryptococcus in the cerebrospinal fluid （CSF）,patient mortality,and the incidence of side effects for the two groups （low- ***-dose） were compared immediately after treatment and 2 and 10 weeks *** were analyzed by the Student＇s t test,chi-square tests using SPSS 12.0 statistical *** Two weeks post-treatment,Cryptococcus negative CSF rates were 78% （18/23） in the low-dose group and 87% （13/15） in the high-dose group （P=0.28）.Ten weeks post-treatment,both groups were *** mortality rate was 8% （2/25） in the low-dose group and 17% （3/18） in the high-dose group （P=-0.25）.There was a statistically significant difference in the incidence of adverse events between the groups,48% （12/25） and 78% （14/18） in the low- and high-dose groups,respectively （P=0.04）.Adverse events that required a change in treatment program in the low-dose group were 12% （3/25） compared to 39% （7/18） in the high-dose group （P=-0.04）.Conclusion Low-dose treatment regimens were better tolerated

关键词： meningitis, cryptococcal amphotericin B, flucytosine therapeutics, cerebrospinal fluid

Efficacy and Safety of Tenofovir Disoproxil Treatment for Chronic Hepatitis B Patients with Genotypic Resistance to Other Nucleoside Analogues： A Prospective Study

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Chinese Medical Journal 2017年第8期130卷 914-919页

作者： Jing Zhou Yue-Ying Liu jiang-Shan Lian Li-Fang Pan jian-Le Yang jian-rong huang State Key Laboratory for Diagnosis and Treatment of Infectious Diseases The First Affiliated Hospital College of Medicine Zhejiang University Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases Hangzhou Zhejiang 310003 China Department of Infectious Disease The First People's Hospital of Yongkang Jinhua Zhejiang 321300 China

Background： Tenofovir disoproxil （TDF） is a promising salvage therapy for patients with chronic hepatitis B （CHB） who failed regimens of other nucleoside analogues （NAs）. In this study, we aimed to investigate the clinical efficacy and safety ofTDF monotherapy in Chinese CHB patients with genotypic resistance. Methods： A total of 33 CHB patients who had tailed treatment with other NAs and had genotypic resistance were switched to TDF monotherapy for 48 weeks. Patients＇ demographic data （age, sex, history of hepatitis B virus [HBV] therapy）, laboratory testing results （hepatitis B e antigen [HBeAg] status, HBV DNA levels, alanine aminotransferase [ALT] levels, serum creatinine, urinary protein, genotypic assay）, clinical symptoms, and liver color ultrasound examinations were collected for evaluation at day 0 （baseline） and the 12th, 24th, 36th, and 48th weeks after initiating treatment. Statistical analyses were carried out using rank sum test or rank correlation. Results： With regard to efficacy, the study found that all patients who switched to TDF monotherapy had undetectable HBV DNA levels after 48 weeks. In addition, patients with lower baseline HBV DNA levels realized earlier virological undetectability （r = 0.39, P = 0.030）. AET levels were normal in 30 of 33 patients （91%）. HBeAg negative conversion occurred in 7 of 25 patients （28%）, among whom HBeAg seroconversion （12%） and H BeAg seroclearance （16%） occurred. The time of complete virological response was significantly affected by the number of resistance loci （r = 0.36, P = 0.040）. Concerning safety, the study found that no adverse events were observed during the 48 weeks. Conclusion： TDF monotherapy is an effective and safe salvage treatment for CHB patients who are resistant to other NAs.

关键词： Drug Resistance Hepatitis B Tenofovir Therapy Safety

An Occupational Dimethylacetamide Poisoning Incident Responded Efficiently in Health Emergency Response Network—Zhuhai City,Guangdong Province,China,August 2023

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China CDC weekly 2024年第34期6卷 872-875页

作者： Jiaxin jiang jian huang Jintong He Chudong Zhang Weihui Liang Qifeng Wu Weifeng rong Xiaoyong Liu Guangdong Province Hospital for Occupational Disease Prevention and Treatment(GDHOD) Guangzhou CityGuangdong ProvinceChina The Third People’s Hospital of Zhuhai(Zhuhai Hospital for Occupational Disease Prevention and Treatment ZHHOD)Zhuhai CityGuangdong ProvinceChina

Summary What is already known about this topic?Dimethylacetamide(DMA),a colorless liquid with low toxicity,is commonly used as a solvent in the production of synthetic materials,petroleum processing,and pharmaceutical *** comparison to substances of higher toxicity,occupational exposure to DMA presents a deceptive risk due to its insidious and subacute progression,increasing the likelihood of escalating into major incidents.

关键词： Dimethyl Guangdong manufacture

Immune cell pair ratio captured by imaging mass cytometry has superior predictive value for prognosis of non-small cell lung cancer than cell fraction and density

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Cancer Communications 2024年第5期44卷 589-592页

作者： jian-rong Li Chao Cheng Institute for Clinical and Translational Research Baylor College of MedicineHoustonTexasUSA Section of Epidemiology and Population Sciences Department of MedicineBaylor College of MedicineHoustonTexasUSA Dan L Duncan Comprehensive Cancer Center Baylor College of MedicineHoustonTexasUSA

Infiltrating immune cells in the tumor microenvironment(TME)play critical roles in the initiation,progression,and metastasis of cancer[1].Previous studies have reported that the infiltration levels of various immune cell types are significantly associated with patient prognosis in different cancers[2,3].Specifically,in non-small cell lung cancer(NSCLC)the prognostic associations of major immune cell types have been investigated[4–6],however,some of the reported associations are inconsistent and remain debated[7].Limited by technical issues,most studies focused on a few immune cell lineages or relied on inferred immune cell levels from computational *** investigate the prognostic effects of all major immune cell types unbiasedly,more systematic high-quality immune cell profiling data with matched patient survival information are needed.

关键词： prognosis cancer lung

Sampling efficiency of a polyurethane foam air sampler:Effect of temperature

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Environmental Science and Ecotechnology 2024年第2期18卷 43-52页

作者： Qiu-Liang Cai Cen-Yan huang Lei Tong Ning Zhong Xiao-rong Dai jian-rong Li Jie Zheng Meng-Meng He Hang Xiao Key Laboratory of Urban Environment and Health Ningbo Observation and Research StationInstitute of Urban EnvironmentChinese Academy of SciencesXiamen361021China Key Laboratory of Ecological Environment Analysis and Pollution Control in Western Guangxi Region College of Agriculture and Food EngineeringBaise UniversityBaise533000China College of Biological and Environmental Sciences Zhejiang Wanli UniversityNingbo315100China Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control CAS Haixi Industrial Technology Innovation Center in BeilunNingbo315830China Minnan Normal University Zhangzhou363000China

Effective monitoring of atmospheric concentrations is vital for assessing the Stockholm Convention's effectiveness on persistent organic pollutants(POPs).This task,particularly challenging in polar regions due to low air concentrations and temperature fluctuations,requires robust sampling ***,the influence of temperature on the sampling efficiency of polyurethane foam discs remains *** we employ a flow-through sampling(FTS)column coupled with an active pump to collect air samples at varying *** delved into breakthrough profiles of key pollutants,such as polycyclic aromatic hydrocarbons(PAHs),polychlorobiphenyls(PCBs),and organochlorine pesticides(OCPs),and examined the temperature-dependent behaviors of the theoretical plate number(N)and breakthrough volume(VB)using frontal chromatography *** findings reveal a significant relationship between temperature dependence coefficients(KTN,KTV)and compound volatility,with decreasing values as volatility *** distinct trends are noted for PAHs,PCBs,and OCPs in KTN,KTV values exhibit similar patterns across all ***,we establish a binary linear correlation between log(VB/m3),1/(T/K),and N,simplifying breakthrough level estimation by enabling easy conversion between N and ***,an empirical linear solvation energy relationship incorporating a temperature term is developed,yielding satisfactory results for N at various *** approach holds the potential to rectify temperature-related effects and loss rates in historical data from long-term monitoring networks,benefiting polar and remote regions.

关键词： Temperature Theoretical plate number Breakthrough volume Frontal chromatographic theory LSER

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生物型人工肝用肝细胞源研究现状及展望

中华肝脏病杂志 2007年第3期15卷 217-218页

作者：黄建荣浙江大学医学院附属第一医院感染病中心、卫生部传染病重点实验室 310003

作为肝衰竭（hepatic failure，FHF）有效治疗手段，生物型人工肝（Bioarti ficial liver，BAL）可以比较全面的替代肝脏解毒，生物合成和分泌代谢等功能。BAL由三部分组成：（1）生物成分；（2）生物反应器；（3）辅助循环装置：包括... 详细信息

作为肝衰竭（hepatic failure，FHF）有效治疗手段，生物型人工肝（Bioarti ficial liver，BAL）可以比较全面的替代肝脏解毒，生物合成和分泌代谢等功能。BAL由三部分组成：（1）生物成分；（2）生物反应器；（3）辅助循环装置：包括外部控制系统和体外循环系统。肝细胞作为其生物成分是BAL发展的关键因素，理想的BAL肝细胞应具有人源化，易获取，可快速、稳定增殖，而且能在数天或数周内保持良好的分化状态，能在体外完成合成和解毒功能。但BAL的细胞来源问题仍未完全解决。长期以来国内外学者不断进行研究，目前研究的肝细胞从来源来看包括人和动物肝细胞、肝干细胞、胚胎肝细胞、骨髓干细胞、人肿瘤来源的肝细胞系及永生化入肝细胞等。现就目前BAL用肝细胞源研究现状作一介绍。

关键词：肝人工肝细胞永生化细胞