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Global patterns and ecological drivers of taxonomic and phylogenetic endemism in angiosperm genera

Plant Diversity 2024年第2期46卷 149-157页

作者： hong qian Brent D.Mishler Jian Zhang Shenhua qian Research and Collections Center Illinois State Museum1011 East Ash StreetSpringfieldIL 62703USA University and Jepson Herbaria Department of Integrative BiologyUniversity of CaliforniaBerkeleyCA 94720-2465USA Center for Global Change and Complex Ecosystems Zhejiang Tiantong Forest Ecosystem National Observation and Research StationSchool of Ecological and Environmental SciencesEast China Normal UniversityShanghai 200241China Shanghai Institute of Pollution Control and Ecological Security Shanghai 200092China Key Laboratory of the Three Gorges Reservoir Region's Eco-Environment Ministry of EducationChongqing UniversityChongqing 400045China

Endemism of lineages lies at the core of understanding variation in community composition among geographic regions because it reflects how speciation,extinction,and dispersal have influenced current distributions.Here,we investigated geographic patterns and ecological drivers of taxonomic and phylogenetic endemism of angiosperm genera across the world.We identify centers of paleo-endemism and neo-endemism of angiosperm genera,and show that they are mostly located in the Southern Hemisphere in tropical and subtropical regions,particularly in Asia and Australia.Different categories of phylogenetic endemism centers can be differentiated using current climate conditions.Current climate,historical climate change,and geographic variables together explained~80%of global variation in taxonomic and phylogenetic endemism,while 42-46%,1%,and 15%were independently explained by these three types of variables,respectively.Thus our findings show that past climate change,current climate,and geography act together in shaping endemism,which are consistent with the findings of previous studies that higher temperature and topographic heterogeneity promote endemism.Our study showed that many centers of phylogenetic endemism of angiosperms,including regions in Amazonia,Venezuela,and west-central tropical Africa that have not previously been identified as biodiversity hotspots,are missed by taxon-based measures of endemism,indicating the importance of including evolutionary history in biodiversity assessment.

关键词： Angiosperm Current climate Endemism Historical climate change Topographic heterogeneity

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Research on Condenser Deterioration Evolution Trend Based on ANP-EWM Fusion Health Degree

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Computer Modeling in Engineering & Sciences 2024年第4期139卷 679-698页

作者： hong qian Haixin Wang Guangji Wang Qingyun Yan College of Automation Engineering Shanghai University of Electric PowerShanghai200090China Shanghai Key Laboratory of Power Station Automation Technology Shanghai200072China Empower Information Technology(Shanghai)Co. Ltd.Shanghai201508China China Nuclear Power Engineering Design Co. Ltd.Shenzhen518052China

This study presents a proposed method for assessing the condition and predicting the future status of condensers operating in seawater over an extended period.The aim is to address the problems of scaling and corrosion,which lead to increased loss of cold resources.The method involves utilising a set of multivariate feature parameters associated with the condenser as input for evaluation and trend prediction.This methodology offers a precise means of determining the optimal timing for condenser cleaning,with the ultimate goal of improving its overall performance.The proposed approach involves the integration of the analytic network process with subjective expert experience and the entropy weightmethod with objective big data analysis to develop a fusion health degreemodel.The mathematical model is constructed quantitatively using the improved Mahalanobis distance.Furthermore,a comprehensive prediction model is developed by integrating the improved Informer model and Markov error correction.This model takes into account the health status of the equipment and several influencing factors,includingmultivariate feature characteristics.This model facilitates the objective examination and prediction of the progression of equipment deterioration trends.The present study involves the computation and verification of the field time series data,which serves to demonstrate the accuracy of the condenser health-related models proposed in this research.These models effectively depict the real condition and temporal variations of the equipment,thus offering a valuable method for determining the precise cleaning time required for the condenser.

关键词： Condenser health degree improved Mahalanobis distance GC-Informer model Markov error correction

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Assessment of Dependent Performance Shaping Factors in SPAR-H Based on Pearson Correlation Coefficient

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Computer Modeling in Engineering & Sciences 2024年第2期138卷 1813-1826页

作者： Xiaoyan Su Shuwen Shang Zhihui Xu hong qian Xiaolei Pan School of Automation Engineering Shanghai University of Electric PowerShanghai 200090China State Key Laboratory of Nuclear Power Safety Monitoring Technology and Equipment Shenzhen518172China

With the improvement of equipment reliability,human factors have become the most uncertain part in the system.The standardized Plant Analysis of Risk-Human Reliability Analysis(SPAR-H)method is a reliable method in the field of human reliability analysis(HRA)to evaluate human reliability and assess risk in large complex systems.However,the classical SPAR-H method does not consider the dependencies among performance shaping factors(PSFs),whichmay cause overestimation or underestimation of the risk of the actual situation.To address this issue,this paper proposes a new method to deal with the dependencies among PSFs in SPAR-H based on the Pearson correlation coefficient.First,the dependence between every two PSFs is measured by the Pearson correlation coefficient.Second,the weights of the PSFs are obtained by considering the total dependence degree.Finally,PSFs’multipliers are modified based on the weights of corresponding PSFs,and then used in the calculating of human error probability(HEP).A case study is used to illustrate the procedure and effectiveness of the proposed method.

关键词： Reliability evaluation human reliability analysis SPAR-H performance shaping factors dependence pearson correlation analysis

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An Improved CREAM Model Based on DS Evidence Theory and DEMATEL

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Computer Modeling in Engineering & Sciences 2024年第3期138卷 2597-2617页

作者： Zhihui Xu Shuwen Shang Yuntong Pu Xiaoyan Su hong qian Xiaolei Pan State Key Laboratory of Nuclear Power Safety Monitoring Technology and Equipment Shenzhen518172China School of Automation Engineering Shanghai University of Electric PowerShanghai200090China School of Safety and Management Engineering Hunan Institute of TechnologyHengyang421002China

Cognitive Reliability and Error Analysis Method(CREAM)is widely used in human reliability analysis(HRA).It defines nine common performance conditions(CPCs),which represent the factors thatmay affect human reliability and are used to modify the cognitive failure probability(CFP).However,the levels of CPCs are usually determined by domain experts,whichmay be subjective and uncertain.What’smore,the classicCREAMassumes that the CPCs are independent,which is unrealistic.Ignoring the dependence among CPCs will result in repeated calculations of the influence of the CPCs on CFP and lead to unreasonable reliability evaluation.To address the issue of uncertain information modeling and processing,this paper introduces evidence theory to evaluate the CPC levels in specific scenarios.To address the issue of dependence modeling,the Decision-Making Trial and Evaluation Laboratory(DEMATEL)method is used to process the dependence among CPCs and calculate the relative weights of each CPC,thus modifying the multiplier of the CPCs.The detailed process of the proposed method is illustrated in this paper and the CFP estimated by the proposed method is more reasonable.

关键词： Human reliability analysis CREAM uncertainty modeling dependence Dempster-Shafer evidence theory DEMATEL

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Evolutionary history shapes variation of wood density of tree species across the world

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Plant Diversity 2024年第3期46卷 283-293页

作者： Fangbing Li hong qian Jordi Sardans Dzhamal Y.Amishev Zixuan Wang Changyue Zhang Tonggui Wu Xiaoniu Xu Xiao Tao Xingzhao Huang Anhui Province Key Laboratory of Forest Resources and Silviculture Anhui Agricultural UniversityHefei 230036China State Key Laboratory of Subtropical Silviculture Zhejiang A&F UniversityHangzhou 311300China Research and Collections Center Illinois State Museum1011 East Ash StreetSpringfieldIL 62703USA CREAF Cerdanyola del VallesBarcelona 08193Spain Global Ecology Unit CREAF-CSIC-UAB CSICBellaterraBarcelona 08193Spain Key Laboratory of Ecosystem Carbon Source and Sink China Meteorological Administration(ECSS-CMA)School of Applied MeteorologyNanjing University of Information Science&Technology219 Ningliu RoadNanjing 210044China Department of Natural Resources Management Lakehead UniversityThunder BayOntario P7B 5E1Canada School of Forestry&Landscape of Architecture Anhui Agricultural UniversityHefei 230036China Research Institute of Subtropical Forestry Chinese Academy of ForestryHangzhou 311400China

The effect of evolutionary history on wood density variation may play an important role in shaping variation in wood density,but this has largely not been tested.Using a comprehensive global dataset including 27,297 measurements of wood density from 2621 tree species worldwide,we test the hypothesis that the legacy of evolutionary history plays an important role in driving the variation of wood density among tree species.We assessed phylogenetic signal in different taxonomic(e.g.,angiosperms and gymnosperms)and ecological(e.g.,tropical,temperate,and boreal)groups of tree species,explored the biogeographical and phylogenetic patterns of wood density,and quantified the relative importance of current environmental factors(e.g.,climatic and soil variables)and evolutionary history(i.e.,phylogenetic relatedness among species and lineages)in driving global wood density variation.We found that wood density displayed a significant phylogenetic signal.Wood density differed among different biomes and climatic zones,with higher mean values of wood density in relatively drier regions(highest in subtropical desert).Our study revealed that at a global scale,for angiosperms and gymnosperms combined,phylogeny and species(representing the variance explained by taxonomy and not direct explained by long-term evolution process)explained 84.3%and 7.7%of total wood density variation,respectively,whereas current environment explained 2.7%of total wood density variation when phylogeny and species were taken into account.When angiosperms and gymnosperms were considered separately,the three proportions of explained variation are,respectively,84.2%,7.5%and 6.7%for angiosperms,and 45.7%,21.3%and 18.6%for gymnosperms.Our study shows that evolutionary history outpaced current environmental factors in shaping global variation in wood density.

关键词： Wood density Phylogeny Angiosperms Gymnosperms Climate factors Biophysical parameters

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Intercontinental comparison of phylogenetic relatedness in introduced plants at the transition from naturalization to invasion:A case study on the floras of South Africa and China

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Plant Diversity 2023年第4期45卷 363-368页

作者： hong qian Research and Collections Center Illinois State Museum1011 East Ash StreetSpringfieldIL 62703USA

Invasive species may pose significant threats to biodiversity and ecosystem structure and functioning.The number of introduced species that have become invasive is substantial and is rapidly increasing.Identifying potentially invasive species and preventing their expansion are of critical importance in invasion ecology.Phylogenetic relatedness between invasive and native species has been used in predicting invasion success.Previous studies on the phylogenetic relatedness of plants at the transition from naturalization to invasion have shown mixed results,which may be because different methods were used in different studies.Here,I use the same method to analyze two comprehensive data sets from South Africa and China,using two phylogenetic metrics reflecting deep and shallow evolutionary histories,to address the question whether the probability of becoming invasive is higher for naturalized species distantly related to the native flora.My study suggests that the probability of becoming invasive is higher for naturalized species closely related to the native flora.The finding of my study is consistent with Darwin's preadaptation hypothesis.

关键词： Angiosperms Exotic species Introduced species Invasive species Naturalized species Phylogenetic relatedness

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Patterns of phylogenetic relatedness of non-native plants across the introduction-naturalization-invasion continuum in China

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Plant Diversity 2023年第2期45卷 169-176页

作者： hong qian CAS Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201China Research and Collections Center Illinois State Museum1011 East Ash StreetSpringfieldIL 62703USA

Human activities have caused the exchange of species among different parts of the world.When introduced species become naturalized and invasive,they may cause great negative impacts on the environment and human societies,and pose significant threats to biodiversity and ecosystem structure.Knowledge on phylogenetic relatedness between native and non-native species and among non-native species at different stages of species invasion may help for better understanding the drivers of species invasion.Here,I analyze a comprehensive data set including both native and non-native angiosperm species in China to determine phylogenetic relatedness of introduced species across a full invasion continuum(from introduction through naturalization to invasion).This study found that(1) introduced plants are a phylogenetically clustered subset of overall(i.***.native plus non-native) angiosperm flora,(2) naturalized plants are a phylogenetically clustered subset of introduced plants,and(3) invasive plants are a phylogenetically clustered subset of naturalized plants.These patterns hold regardless of spatial scales examined(i.***.national versus provincial scale) and whether basal-or tip-weighted metric of phylogenetic relatedness is considered.These findings are consistent with Darwin's preadaptation hypothesis.

关键词： Angiosperm Community assembly Darwin's preadaptation hypothesis Exotic species Introduced species Phylogenetic dispersion

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Geographic patterns of taxonomic and phylogenetic β-diversity of angiosperm genera in regional floras across the world

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Plant Diversity 2023年第5期45卷 491-500页

作者： hong qian Shenhua qian Research and Collections Center Illinois State Museum1011 East Ash StreetSpringfieldIL 62703USA Key Laboratory of the Three Gorges Reservoir Region's Eco-Environment Ministry of EducationChongqing UniversityChongqing 400045China

Beta diversity(β-diversity)is the scalar between local(α)and regional(γ)diversity.Understanding geographic patterns ofβ-diversity is central to ecology,biogeography,and conservation biology.A full understanding of the origin and maintenance of geographic patterns ofβ-diversity requires exploring both taxonomic and phylogeneticβ-diversity,as well as their respective turnover and nestedness components,and exploring phylogenetic p-diversity at different evolutionary depths.In this study,we explore and map geographic patterns ofβ-diversity for angiosperm genera in regional floras across the world.We examine both taxonomic and phylogeneticβ-diversity and their constituent components,and both tip-weighted and basal-weighted phylogeneticβ-diversity,and relate them to latitude.On the one hand,our study found that the global distribution ofβ-diversity is highly heterogeneous.This is the case for both taxonomic and phylogeneticβ-diversity,and for both tip-weighted and basal-weighted phylogeneticβ-diversity.On the other hand,our study found that there are highly consistent geographic patterns among different metrics ofβ-diversity.In most cases,metrics ofβ-diversity are negatively associated with latitude,particularly in the Northern Hemisphere.Different metrics of taxonomicβ-diversity are strongly and positively correlated with their counterparts of phylogeneticβ-diversity.

关键词： Angiosperm Beta diversity Flowering plant Latitudinal gradient Phylogenetic relatedness

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Drivers of the differentiation between broad-leaved trees and shrubs in the shift from evergreen to deciduous leaf habit in forests of eastern Asian subtropics

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Plant Diversity 2023年第5期45卷 535-543页

作者： Yi Jin hong qian Key Laboratory of National Forestry and Grassland Administration on Biodiversity Conservation in Karst Mountainous Areas of Southwestern China Guizhou Normal UniversityGuiyang 550025China Research and Collections Center Illinois State Museum1011 East Ash StreetSpringfieldIL62703USA

In eastern Asian subtropical forests,leaf habit shifts from evergreen to deciduous broad-leaved woody plants toward higher latitudes.This shift has been largely explained by the greater capacity of deciduous broad-leaved plants to respond to harsh climatic conditions(e.g.,greater seasonality).The advantages of deciduous leaf habit over evergreen leaf habit in more seasonal climates have led us to hypothesize that leaf habits would shift in response to climate changes more conspicuously in forest canopy trees than in forest understory shrubs.Furthermore,we hypothesize that in the forests of the subtropics,plants at higher latitudes,regardless of growth form,would better tolerate seasonal harsh climates,and hence show less differentiation in leaf habit shift,compared to those at lower latitudes.To test these two hypotheses,we modelled the proportion of deciduous broad-leaved species and the incidence of deciduous and evergreen broad-leaved species in woody angiosperm species compositions of ten largesized forest plots distributed in the Chinese subtropics.We found that the rate of leaf habit shift along a latitudinal gradient was higher in forest trees than in forest shrubs.We also found that the differentiation in leaf habit shift between trees and shrubs is greater at lower latitudes(i.e.,warmer climates)than at higher latitudes(i.e.,colder climates).These findings indicate that specialized forest plants are differentially affected by climate in distinct forest strata in a manner dependent on latitudinal distribution.These differences in forest plant response to changes in climate suggest that global climate warming will alter growth forms and geographical distributions and ranges of forests.

关键词： Functional trait Leaf life span Forest dynamics plot Latitudinal gradient

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U.PhyloMaker: An R package that can generate large phylogenetic trees for plants and animals

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Plant Diversity 2023年第3期45卷 347-352页

The previously released packages of the PhyloMaker series(i.e.S.PhyloMaker,V.PhyloMaker,and V.PhyloMaker2) have been broadly used to generate phylogenetic trees for ecological and biogeographical studies.Although these packages can be used to generate phylogenetic trees for any groups of plants and animals for which megatrees are available,they focus on generating phylogenetic trees for plants based on the megatrees provided by the packages.How to use these packages to generate phylogenetic trees based on other megatrees is not straightforward.Here,we present a new tool,which is called ‘U.PhyloMaker’,and a simple R script that can be used to easily generate large phylogenetic trees for both plants and animals at a relatively fast speed.

关键词： Animals Community phylogenetics Megatree Phylogeny Plants Species list

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