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Fungal Diversity 2013年第6期63卷 1-313页

作者： Kevin D.Hyde E.B.Gareth Jones Jian-Kui Liu Hiran Ariyawansa Eric Boehm Saranyaphat Boonmee Uwe Braun Putarak Chomnunti Pedro W.Crous Dong-Qin Dai Paul Diederich Asha Dissanayake Mingkhuan Doilom Francesco Doveri Singang Hongsanan Ruvishika Jayawardena James D.Lawrey Yan-Mei Li Yong-Xiang Liu Robert Lücking Jutamart Monkai Lucia Muggia Matthew P.Nelsen Ka-Lai Pang Rungtiwa Phookamsak Indunil C.Senanayake Carol A.Shearer Satinee Suetrong Kazuaki Tanaka Kasun M.Thambugala Nalin N.Wijayawardene Saowanee Wikee Hai-Xia Wu Ying Zhang Begoña Aguirre-Hudson S.Aisyah Alias AndréAptroot Ali H.Bahkali Jose L.Bezerra D.Jayarama Bhat Erio Camporesi Ekachai Chukeatirote Cécile Gueidan David L.Hawksworth Kazuyuki Hirayama Sybren De Hoog Ji-Chuan Kang Kerry Knudsen Wen-Jing Li Xing-Hong Li Zou-Yi Liu Ausana Mapook Eric H.C.McKenzie Andrew N.Miller Peter E.Mortimer Alan J.L.Phillips Huzefa A.Raja Christian Scheuer felix schumm Joanne E.Taylor Qing Tian Saowaluck Tibpromma Dhanushka N.Wanasinghe Yong Wang Jian-Chu Xu Supalak Yacharoen Ji-Ye Yan Min Zhang Key Laboratory for Plant Biodiversity and Biogeography of East Asia(KLPB) Kunming Institute of BotanyChinese Academy of ScienceKunming 650201Yunnan China World Agroforestry Centre East Asia NodeHeilongtanKunming 650201China Institute of Excellence in Fungal Research Chiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Institute Ocean Earth Sciences Kuala Lumpur 50603SelangorMalaysia Department of Botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia 42 Longacre Drive LivingstonNJ 07039USA Institut für Biologie Bereich Geobotanik und Botanischer GartenHerbariumMartin-Luther-UniversitätNeuwerk 2106099 Halle(Saale)Germany CBS-KNAW Fungal Biodiversity Centre Uppsalalaan 83584CT UtrechtThe Netherlands Musée National d’histoire Naturelle 25 rue Munster2160 LuxembourgLuxembourg Institute of Plant and Environment Protection Beijing Academy of Agriculture and Forestry SciencesBeijing 100097People’s Republic of China Via dei Funaioli 22 57126 LivornoItaly Department of Environmental Science and Policy George Mason University4400 University DriveFairfaxVA 22030-4444USA International Fungal Research and Development Centre Key Laboratory of Resource Insect Cultivation&Utilization State Forestry AdministrationKunming 650224People’s Republic of China The Research Institute of Resource Insects Chinese Academy of ForestryKunming 650224People’s Republic of China Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyangGuizhou 550006People’s Republic of China Science and Education Integrative Research(Botany)The Field Museum1400 South Lake Shore DriveChicagoIL 60605-2496USA Institute of Plant Sciences University of GrazHolteigasse 68010 GrazAustria Department of Life Science University of TriesteVia L.Giorgieri 10TriesteItaly Committee on Evolutionary Biology University of Chicago1025 E.57th StreetChicagoIL 60637USA Institute ofMarine Biology and Center of Excellence for the Oceans Taiwan

Dothideomycetes comprise a highly diverse range of fungi characterized mainly by asci with two wall layers(bitunicate asci)and often with fissitunicate *** species are saprobes,with many asexual states comprising important plant *** are also endophytes,epiphytes,fungicolous,lichenized,or lichenicolous *** occur in terrestrial,freshwater and marine habitats in almost every part of the *** accept 105 families in Dothideomycetes with the new families Anteagloniaceae,Bambusicolaceae,Biatriosporaceae,Lichenoconiaceae,Muyocopronaceae,Paranectriellaceae,Roussoellaceae,Salsugineaceae,Seynesiopeltidaceae and Thyridariaceae introduced in this *** family is provided with a description and notes,including asexual and asexual states,and if more than one genus is included,the type genus is also *** family is provided with at least one figure-plate,usually illustrating the type genus,a list of accepted genera,including asexual genera,and a key to these genera.A phylogenetic tree based on four gene combined analysis add support for 64 of the families and 22 orders,including the novel orders,Dyfrolomycetales,Lichenoconiales,Lichenotheliales,Monoblastiales,Natipusillales,Phaeotrichales and *** paper is expected to provide a working document on Dothideomycetes which can be modified as new data comes to *** is hoped that by illustrating types we provide stimulation and interest so that more work is carried out in this remarkable group of fungi.

关键词： Acrospermales Asterinales Botryosphaeriales Capnodiales Dothideales Dyfrolomycetales Hysteriales Jahnulales Lichenoconiales Lichenotheliales Microthyriales Monoblastiales Myriangiales Mytilinidiales Natipusillales Patellariales Phaeotrichales Phylogeny Pleosporales Strigulales Taxonomy Trypetheliales Tubeufiales Type species Venturiales

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Refined families of Dothideomycetes:orders and families incertae sedis in Dothideomycetes

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Fungal Diversity 2020年第6期105卷 17-318页

作者： Sinang Hongsanan Kevin D.Hyde Rungtiwa Phookamsak Dhanushka N.Wanasinghe Eric H.C.McKenzie V.Venkateswara Sarma Robert Lücking Saranyaphat Boonmee Jayarama D.Bhat Ning-Guo Liu Danushka S.Tennakoon Dhandevi Pem Anuruddha Karunarathna Shu-Hua Jiang Gareth E.B.Jones Alan J.L.Phillips Ishara S.Manawasinghe Saowaluck Tibpromma Subashini C.Jayasiri Diana Sandamali Ruvishika S.Jayawardena Nalin N.Wijayawardene Anusha H.Ekanayaka Rajesh Jeewon Yong-Zhong Lu Chayanard Phukhamsakda Asha J.Dissanayake Xiang-Yu Zeng Zong-Long Luo Qing Tian Kasun M.Thambugala Dongqin Dai Milan C.Samarakoon K.W.Thilini Chethana Damien Ertz Mingkwan Doilom Jian-Kui(Jack)Liu Sergio Pérez-Ortega Ave Suija Chanokned Senwanna Subodini N.Wijesinghe Mekala Niranjan Sheng-Nan Zhang Hiran A.Ariyawansa Hong-Bo Jiang Jin-Feng Zhang Chada Norphanphoun Nimali Ide Silva Vinodhini Thiyagaraja Huang Zhang Jadson D.P.Bezerra Ricardo Miranda-González AndréAptroot Hiroyuki Kashiwadani Dulanjalee Harishchandra Emmanuël Sérusiaux Pranami DAbeywickrama Dan-Feng Bao Bandarupalli Devadatha Hai-Xia Wu Kwang Hee Moon Cecile Gueidan felix schumm Digvijayini Bundhun Ausana Mapook Jutamart Monkai Chitrabhanu S.Bhunjun Putarak Chomnunti Satinee Suetrong Napalai Chaiwan Monika C.Dayarathne Jing Yang Achala R.Rathnayaka Jian-Chu Xu Jiesheng Zheng Gang Liu Yao Feng Ning Xie Guangdong Provincial Key Laboratory for Plant Epigenetics Shenzhen Key Laboratory of Microbial Genetic EngineeringCollege of Life Science and OceanographyShenzhen UniversityShenzhen 518060People’s Republic of China Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand CAS Key Laboratory for Plant Diversity and Biogeography of East Asia(KLPB) Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China East and Central Asia Regional Office World Agroforestry Centre(ICRAF)Kunming 650201YunnanPeople’s Republic of China Centre for Mountain Futures(CMF) Kunming Institute of BotanyKunming 650201YunnanPeople’s Republic of China Department of Entomology and Plant Pathology Faculty of AgricultureChiang Mai UniversityChiang Mai 50002Thailand Institute of Plant Health Zhongkai University of Agriculture and EngineeringHaizhu DistrictGuangzhou 510225People’s Republic of China World Agroforestry Centre East and Central Asia132 Lanhei RoadKunming 650201YunnanPeople’s Republic of China Manaaki Whenua-Landcare Research Private Mail Bag 92170AucklandNew Zealand Fungal Biotechnology Lab Department of BiotechnologySchool of Life SciencesPondicherry UniversityKalapetPondicherry 605014India School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Botanischer Garten und Botanisches Museum Freie Universität BerlinKönigin-Luise-Straße 6-814195 BerlinGermany 13128/1-J Azad Co-Op Housing SocietyCurcaP.O.Goa Velha 403108India Faculty of Agriculture Natural Resources and EnvironmentNaresuan UniversityPhitsanulok 65000Thailand Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006People’s Republic of China School of Life Science and Technology University of Electronic Science and Technology of ChinaChengdu 611731People’s Republic of China State Key Laboratory of Mycology Institute of MicrobiologyChinese Academy of SciencesBeijing 100101People’s Republic of C

Numerous new taxa and classifications of Dothideomycetes have been published following the last monograph of families of Dothideomycetes in 2013.A recent publication by Honsanan et *** 2020 expanded information of families in Dothideo-mycetidae and Pleosporomycetidae with modern *** this paper,we provide a refined updated document on orders and families incertae sedis of *** family is provided with an updated description,notes,including figures to represent the morphology,a list of accepted genera,and economic and ecological *** also provide phylogenetic trees for each *** this study,31 orders which consist 50 families are assigned as orders incertae sedis in Dothideomycetes,and 41 families are treated as families incertae sedis due to lack of molecular or morphological *** new order,Catinellales,and four new families,Catinellaceae,Morenoinaceae Neobuelliellaceae and Thyrinulaceae are *** genera(Neobuelliella,Pseudomicrothyrium,Flagellostrigula,Swinscowia,Macroconstrictolumina,Pseudobogoriella,and schummia)are *** new species(Acrospermum urticae,Bogoriella complexoluminata,Dothiorella ostryae,Dyfrolomyces distoseptatus,Macroconstrictolumina megalateralis,Patellaria microspora,and Pseu-domicrothyrium thailandicum)are introduced base on morphology and phylogeny,together with two new records/reports and five new collections from different *** new combinations are also provided in this paper.

关键词： Abrothallales Ascrospermales Asterinales Botryosphaeriales Catinellales Cladoriellales Collemopsidiales Dyfrolomycetales Eremithallales Eremomycetales Jahnulales Kirschsteiniotheliales Lembosinales Lichenotheliales Microthyriales Minutisphaerales Monoblastiales Murramarangomycetales new family new genera new order new species Parmulariales Patellariales Phaeotrichales Phylogeny Stigmatodiscales Strigulales Superstratomycetales Taxonomy Trypetheliales Tubeufiales Valsariales Venturiales Zeloasperisporiales

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Classes and phyla of the kingdom Fungi

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Fungal Diversity 2024年第1期1卷 1-165页

作者： Nalin N.Wijayawardene Kevin D.Hyde Kirill V.Mikhailov Gabor Peter Andre Aptroot Carmen L.A.Pires‑Zottarelli Bruno T.Goto Yuri S.Tokarev Danny Haelewaters Samantha C.Karunarathna Paul M.Kirk Andre L.C.M.de A.Santiago Ramesh K.Saxena Nathan Schoutteten Madhara K.Wimalasena Vladimir V.Aleoshin Abdullah M.S.Al‑Hatmi Kahandawa G.S.U.Ariyawansa Amanda R.Assuncao Thushara C.Bamunuarachchige Hans‑Otto Baral D.Jayarama Bhat Janusz Błaszkowski Teun Boekhout Nattawut Boonyuen Michael Brysch‑Herzberg Bin Cao Jonathan Cazabonne Xue‑Mei Chen Claudia Coleine Dong‑Qin Dai Heide‑Marie Daniel Suzana B.G.da Silva Francisco Adriano de Souza Somayeh Dolatabadi Manish K.Dubey Arun K.Dutta Aseni Ediriweera Eleonora Egidi Mostafa S.Elshahed Xinlei Fan Juliana R.B.felix Mahesh C.A.Galappaththi Marizeth Groenewald Li‑Su Han Bo Huang Vedprakash G.Hurdeal Anastasia N.Ignatieva Gustavo H.Jeronimo Ana L.de Jesus Serhii Kondratyuk Jaturong Kumla Martin Kukwa Qirui Li Juliana L.R.Lima Xiao‑Yong Liu Wenhua Lu H.Thorsten Lumbsch Hugo Madrid Franco Magurno Guy Marson Eric H.C.McKenzie Audrius Menkis Armin Mešić Elaine C.R.Nascimento Elena S.Nassonova Yong Nie Naasson V.L.Oliveira Emilia A.Ossowska Julia Pawłowska Ursula Peintner Igor R.Pozdnyakov Bhagya M.Premarathne A.K.Hasith Priyashantha C.Alisha Quandt Mariana B.Queiroz Kunhiraman C.Rajeshkumar Mubashar Raza Niranjan Roy Milan C.Samarakoon Alessandra A.Santos Lidiane A.Santos felix schumm Laura Selbmann Faruk Selcuk D.Rabern Simmons Anastasia V.Simakova Maudy Th.Smith Onden Paraparath Sruthi Nakarin Suwannarach Kazuaki Tanaka Saowaluck Tibpromma Elias O.Tomas Merve Ulukapı Nicolas Van Vooren Dhanushka N.Wanasinghe Evi Weber Qianzhen Wu Er Fu Yang Ryuichi Yoshioka Noha H.Youssef Annemarie Zandijk Gui‑Qing Zhang Jin‑Yong Zhang Heng Zhao RuiLin Zhao Oleg A.Zverkov Marco Thines Sergey A.Karpov Center for Yunnan Plateau Biological Resources Protection and Utilization College of Biological Resource and Food EngineeringQujing Normal UniversityQujing 655011YunnanPeople’s Republic of China Tropical Microbiology Research Foundation 96/N/10Meemanagoda RoadPannipitiya 10230Sri Lanka Department of Bioprocess Technology Faculty of TechnologyRajarata UniversityMihintaleSri Lanka Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiangRai 57100Thailand Innovative Institutefor Plant Health Zhongkai University of Agriculture and EngineeringGuangzhou 510225People’s Republic of China CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia(KLPB) Kunming Institute of BotanyChinese Academy of ScienceKunmingYunnanChina Belozersky Institute of Physicochemical Biology Lomonosov Moscow State UniversityLeninskye Gory1Build.40Moscow 119991Russian Federation Kharkevich Institute for Information Transmission Problems Russian Academy of SciencesMoscow 127051Russian Federation National Collection of Agricultural and Industrial Microorganisms Institute of Food Science and TechnologyHungarian University of Agriculture and Life SciencesSomlóiút 14‑161118 BudapestHungary Instituto de Biociências Universidade Federal de Mato Grosso do SulAvenida Costa e Silvas/n Bairro UniversitárioCampo GrandeMS CEP 79070‑900Brazil Instituto de Pesquisas Ambientais Secretaria do Meio AmbienteInfraestrutura e LogísticaAv.Miguel Stéfano 3687São PauloSP CEP 04301‑902Brazil Departamento de Botânica e Zoologia Universidade Federal do Rio Grande do NorteCampus UniversitárioNatalRN 59078-900Brazil All-Russian Institute of Plant Protection Sh.Podbelskogo 3PushkinSt.Petersburg 196608Russia Research Group Mycology Department of BiologyGhent University9000 GhentBelgium Faculty of Science University of South Bohemia37005ČeskéBudějoviceCzech Republic Department of Ecology and Evolutionary Biology University of Colora

Fungi are one of the most diverse groups of organisms with an estimated number of species in the range of 2–3 *** higher-level ranking of fungi has been discussed in the framework of molecular phylogenetics since Hibbett et al.,and the definition and the higher ranks(e.g.,phyla)of the‘true fungi’have been revised in several subsequent *** accumulation of novel genomic data and the advancements in phylogenetics now facilitate a robust and precise foundation for the higher-level classification within the *** study provides an updated classification of the kingdom Fungi,drawing upon a comprehensive phylogenomic analysis of Holomycota,with which we outline well-supported nodes of the fungal tree and explore more contentious *** accept 19 phyla of Fungi,***,Ascomycota,Basidiobolomycota,Basidiomycota,Blastocladiomycota,Calcarisporiellomycota,Chytridiomycota,Entomophthoromycota,Entorrhizomycota,Glomeromycota,Kickxellomycota,Monoblepharomycota,Mortierellomycota,Mucoromycota,Neocallimastigomycota,Olpidiomycota,Rozellomycota,Sanchytriomycota,and *** the phylogenies,Caulochytriomycota resides in Chytridiomycota;thus,the former is regarded as a synonym of the latter,while Caulochytriomycetes is viewed as a class in *** provide a description of each phylum followed by its classes.A new subphylum,Sanchytriomycotina Karpov is introduced as the only subphylum in *** subclass Pneumocystomycetidae Kirk et *** Pneumocystomycetes,Ascomycota is invalid and thus *** of fossil fungi in phyla and classes are also discussed,providing examples.

关键词： Caulochytriomycota Phylogenomic analyses Pneumocystomycetidae Sanchytriomycotina

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