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Phylogeography,genetic variability and structure of Acanthamoeba metapopulations in Iran inferred by 18S ribosomal RNA sequences:A systematic review and meta-analysis

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Asian Pacific Journal of Tropical Medicine 2017年第9期10卷 855-863页

作者： Adel Spotin Hamid Reza Moslemzadeh Mahmoud Mahami-Oskouei Ehsan Ahmadpour Maryam Niyyati Seyed Hossein Hejazi fatemeh memari Jafar Noori Immunology Research Center Tabriz University of Medical SciencesTabrizIran Department of Parasitology and Mycology Faculty of MedicineTabriz University of Medical SciencesTabrizIran Department of Medical Parasitology and Mycology School of MedicineShahid Beheshti University of Medical SciencesTehranIran Department of Parasitology and Mycology School of MedicineIsfahan University of Medical SciencesIsfahanIran

Objective: To verify phylogeography and genetic structure of Acanthamoeba populations among the Iranian clinical isolates and natural/artificial environments distributed in various regions of the ***: We searched electronic databases including Medline, Pub Med, Science Direct, Scopus and Google Scholar from 2005 to 2016. To explore the genetic variability of Acanthamoeba sp, 205 sequences were retrieved from keratitis patients, immunosuppressed cases and environmental sources as of various geographies of ***: T4 genotype was the predominant strain in Iran, and the rare genotypes belonged to T2, T3, T5(Acanthamoeba lenticulata), T6, T9, T11, T13 and T15(Acanthamoeba jacobsi).A total of 47 unique haplotypes of T4 were identified. A parsimonious network of the sequence haplotypes demonstrated star-like feature containing haplogroups IR6(34.1%) and IR7(31.2%) as the most common haplotypes. In accordance with the analysis of molecular variance, the high value of haplotype diversity(0.612–0.848) of Acanthamoeba T4 represented genetic variability within populations. Neutrality indices of the 18 S ribosomal RNA demonstrated negative values in all populations which represented a considerable divergence from neutrality. The majority of genetic diversity belonged to the infected contact lens and dust samples in immunodeficiency and ophthalmology wards, which indicated potential routes for exposure to a pathogenic Acanthamoeba sp. in at-risk individuals. A pairwise fixation index(FST) was from low to high values(0.024 33–0.418 92). The statistically FST points out that T4 is genetically differentiated between north-west, north-south and centralsouth metapopulations, but not differentiated between west-central, west-south, centralsouth, and north-central ***: An occurrence of IR6 and IR7 displays that possibly a gene flow of Acanthamoeba T4 occurred after the founder effect or bottleneck experience through ecological changes or host mobility

关键词： Acanthamoeba metapopulations 基因可变性基因流动分子的发展史伊朗

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Vacuum Packaging Sensor Based on Time-Resolved Phosphorescence Spectroscopy

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Photonic Sensors 2024年第1期14卷 1-12页

作者： Esmaeil HEYDARI fatemeh YARI Hossein ZARE-BEHTASH Nanophotonic Sensors&Optofluidics Lab Faculty of PhysicsKharazmi UniversityTehran 15719-14911Iran

Intelligent food packaging with the multisensory analysis is promising as the next generation technology of food *** oxygen content in food packaging is one of the crucial parameters affecting the food quality and shelf *** is among the most nutritious and costly food ***,a photonic oxygen-sensing system,based on the time-resolved phosphorescence spectroscopy of a platinum complex,is developed for non-contact,non-intrusive,and real-time vacuum packaging quality control,and implemented for caviar *** sensor is embedded in protective polyethylene layers and excited with a short-pulsed light emitting diode(LED)*** of a blue pulsed light source,a fast and amplified silicon photodiode controlled by the Spartan-6 field programmable gate array(FPGA),and a long lifetime platinum complex results in a photonics-based oxygen sensor with a fast response and high sensitivity to the vacum packaging damage,which is suitable for *** is revealed that applying the polyethylene layers protects the caviar from the platinum complex,leaching while not interfering with the sensor *** the photonic system based on its sensitivity,repeatability,stability,and long-term operation demonstrates its capability for this application.

关键词： Caviar photoluminescence lifetime oxygen sensor platinum porphyrin complex vacuum packaging

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An all-optical 1*2 de-multiplexer based on two-dimensional nonlinear photonic crystal ring resonators

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Optoelectronics Letters 2024年第1期20卷 23-27页

作者： Esmat Rafiee fatemeh Abolghasemi Department of Electrical Engineering Faculty of EngineeringAlzahra UniversityTehranIran

In this work,a new configuration of an all-optical nonlinear de-multiplexer gate based on two-dimensional(2D)photonic crystals(Ph C)is *** gate is considered in the double-ring resonator shaped structure of silicon *** order to have a more functional structure,some defect rods made of nonlinear materials were positioned in the *** the functionality of the structure,photonic band gap(PBG),field distribution and transmitted power spectra are *** wave expansion and finite difference time domain(FDTD)methods are utilized for extracting the PBG and field distribution *** remarkable dimension,bit rate,maximum intensity and contrast ratio of 116.64μm2,3.125 Tbit/s,97%and 40.2 dB are obtained,respectively,which make the gate an appropriate candidate for utilization in optical integrated circuits.

关键词： optical resonator nonlinear

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Comparison of carotenoid,chlorophyll concentrations and their biosynthetic transcript levels in different coloured cauliflower

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Horticultural Plant Journal 2024年第3期10卷 743-754页

作者： fatemeh Izadpanah Katja Frede Forouzandeh Soltani Susanne Baldermann Food Chemistry and Human Nutrition Leibniz Institute of Vegetable and Ornamental CropsTheodor-Echtermeyer-Weg 114979 GroßbeerenGermany Department of Food Chemistry Institute of Nutritional SciencesUniversity of PotsdamArthur-Scheunert-Allee 114-11614558 NuthetalGermany Department of Horticultural Science University of TehranDaneshkade Ave31587-77871KarajIran Faculty of Life Sciences:Food Nutrition and HealthFood MetabolomeUniversity of BayreuthFritz-Hornschuch-Straße1395326 KulmbachGermany

Carotenoids and chlorophylls are among the most widely distributed pigments in nature that play essential roles in the photosynthetic apparatus and confer diverse colours in *** all vegetables,cauliflower(Brassica oleracea ***)is rich in phytochemicals and is an important crop grown all over the *** study investigates carotenoid and chlorophyll concentrations in differently pigmented cultivars and elucidates the role of transcriptional regulation of carotenoid accumulation including lutein andβ-***,we characterised changes in pigments by UHPLC-DAD-ToF-MS and changes in transcript levels of carotenoid metabolic genes by qRT-PCR in florets and leaves of orange(‘Jaffa'and‘Sunset'),purple(‘Di Sicilia Violetto'and‘Graffiti'),green(‘Trevi')and white(‘Clapton')*** levels of all carotenoid metabolic genes showed different transcript level patterns in the leaves and *** to the other cultivars,the orange cultivars had the highest levels ofβ-carotene in the florets and lutein in the leaves resulting in changes lutein/β-carotene *** the green cultivar,higher transcript levels were also found,especially for phytoene synthase and phytoene desaturase genes of the core biosynthesis ***,no increased carotenoid concentrations were observed,possibly due to a higher carotenoid turnover induced by the carotenoid cleavage dioxygenase 4 in the green *** the white(‘Clapton')and purple(‘Di Sicilia Violetto'and‘Graffiti')cultivars the phytoene desaturase transcript levels as well as carotenoid concentrations were *** concentrations changed in trend comparable to the carotenoid concentrations and were only significantly lower in the leaves of the orange cultivar‘Jaffa'.Also,the chlorophyll a/b ratio changed in‘Jaffa'.In florets the highest chlorophylls concentrations were observed for the green cultivar(‘Trevi')and the purple cultivar(‘Di Sicilia Violetto').Taken together,the study dem

关键词： Brassica oleracea L.var.botrytis Carotenoid Lutein β-Carotene Biosynthesis qRT-PCR

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Two-dimensional Parameter Relationships for W UMa-type Systems Revisited

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Research in Astronomy and Astrophysics 2024年第1期24卷 51-58页

作者： Atila Poro Ehsan Paki Ailar Alizadehsabegh Mehdi Khodadadilori Selda Ranjbar Salehian Mahya Hedayatjoo fatemeh Hashemi Yasaman Dashti fatemeh Mohammadizadeh Astronomy Department of the Raderon AI Lab. BurnabyBCCanada Faculty of Electrical and Computer Engineering Department of PhotonicsUniversity of TabrizTabriz 51664Iran Department of Electrical Engineering Amirkabir University of TechnologyTehranIran Astronomy Students'Scientific Association University of TabrizTabriz 51664Iran Department of Physics Iran University of Science and TechnologyTehranIran Institute for the Intellectual Development(Kanoon) Astronomy GroupBojnordIran Department of Mechanical Engineering Amirkabir University of TechnologyTehranIran Aerospace Engineering Department Science and Research Branch of Islamic Azad UniversityTehranIran

Reviewing the empirical and theoretical parameter relationships between various parameters is a good way to understand more about contact binary *** this investigation,two-dimensional(2D)relationships for P–MV(system),P–L1,2,M1,2–L1,2,and q–Lratiowere *** sample used is related to 118 contact binary systems with an orbital period shorter than 0.6 days whose absolute parameters were estimated based on the Gaia Data Release 3 *** reviewed previous studies on 2D relationships and updated six parameter ***,Markov chain Monte Carlo and Machine Learning methods were used,and the outcomes were *** selected 22 contact binary systems from eight previous studies for comparison,which had light curve solutions using spectroscopic *** results show that the systems are in good agreement with the results of this study.

关键词： (stars:)binaries(including multiple):close stars:fundamental parameters methods:data analysis

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Hippo-YAP/TAZ signaling in breast cancer:Reciprocal regulation of microRNAs and implications in precision medicine

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Genes & Diseases 2024年第2期11卷 760-771页

作者： Farzad Sadri Seyede fatemeh Hosseini Zohreh Rezaei Mohammad Fereidouni Student Research Committee Birjand University of Medical SciencesBirjand ***Iran Tabas School of Nursing Birjand University of Medical SciencesBirjand ***Iran Department of Biology University of Sistan and BaluchestanZahedan ***Iran Cellular and Molecular Research Center Birjand University of Medical SciencesBirjand ***Iran

Breast cancer is a molecularly heterogeneous disease and the most common female *** recent years,therapy approaches have evolved to accommodate molecular diversity,with a focus on more biologically based therapies to minimize negative *** regulate cell fate in human breast cells,the Hippo signaling pathway has been associated with the alpha subtype of estrogen *** pathway regulates tissue size,regeneration,and healing,as well as the survival of tissue-specific stem cells,proliferation,and apoptosis in a variety of organs,allowing for cell *** signaling is mediated by the kinases MST1,MST2,LATS1,and LATS2,as well as the adaptor proteins SAV1 and *** kinases phosphorylate the downstream effectors of the Hippo pathway,yes-associated protein(YAP),and transcriptional coactivator with PDZ-binding motif(TAZ),suppressing the expression of their downstream target *** Hippo signaling pathway kinase cascade plays a significant role in all *** the principles of this kinase cascade would prevent the occurrence of breast *** recent years,small noncoding RNAs,or microRNAs,have been implicated in the development of several malignancies,including breast *** interconnections between miRNAs and Hippo signaling pathway core proteins in the breast,on the other hand,remain poorly *** this review,we focused on highlighting the Hippo signaling system,its key parts,its importance in breast cancer,and its regulation by miRNAs and other related pathways.

关键词： Breast cancer Hippo signaling Large tumor suppressor kinase 1 microRNAs PDZ-binding motif Yes-associated protein

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Protective effect of co-enzyme Q10 on testicular tissue and sperm parameters in adult male rats treated with Sunset Yellow FCF

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Asian pacific Journal of Reproduction 2024年第2期13卷 80-88页

作者： Rohollah Nazari Somayeh Akbari Maryam Naseh Shayan Yousufzai Seyede fatemeh Hosseini fatemeh Karimi Histomorphometry and Stereology Research Center Shiraz University of Medical SciencesShirazIran Anatomy Department School of MedicineShiraz University of Medical SciencesShirazIran Student Research Committee Medical SchoolShiraz University of Medical SciencesShirazIran Faculty of Tabas School of NursingBirjand University of Medical SciencesBirjandIran

Objective:To determine the protective effect of co-enzyme Q10(CoQ10)on testicular tissue and sperm parameters in male rats treated with SunsetYellow ***:Sixty male Sprague-Dawley rats were randomly divided into 6 groups of the control,CoQ10(10 mg/kg/day),low dose of Sunset Yellow(2.5 mg/kg),high dose of Sunset Yellow(70 mg/kg),low dose of Sunset Yellow(2.5 mg/kg)plus CoQ10,and high dose of Sunset Yellow(70 mg/kg)plus *** drugs were administered via daily oral gavages for 6 *** the end of the experiment,sperm analysis,stereological and histological assessments of the testis were carried ***:The normal morphology(by 41.1%)and progressive spermatozoa(by 74.8%),testicle volume(by 33.4%),lumen volume(by 38.3%),interstitial tissue volume(by 44.7%),seminiferous tubule volume(by 40.7%),and number of spermatogonia(by 53.9%)and Leydig cells(by 70.7%)reduced in the rats that received high doses of Sunset Yellow in comparison to the control ***,all these alterations were recovered by CoQ10 treatment in the CoQ10 plus high dose of Sunset Yellow ***,low doses of Sunset Yellow did not affect different parameters of the testis and ***:CoQ10 could,to some extent,prevent structural changes of the testis induced by the high dose of SunsetYellow.

关键词： Sunset Yellow FCF Co-enzyme Q10 Testicle Sperm Stereology

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Mineral Chemistry,Trace Elements,Isotopic Analysis and Zircon U-Pb Dating in the Hesar Pluton,Northern UDMA,Iran:Implications for Pre-Collisional Magma Mixing

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Acta Geologica Sinica(English Edition) 2024年第3期98卷 657-678页

作者： Kazem KAZEMI Soroush MODABBERI Parisa GHARIBNEJAD XIAO Yilin fatemeh SARJOUGHIAN Ali KANANIAN School of Geology College of ScienceUniversity of TehranTehranIran Research Centre for Mineral Resources Xinjiang Institute of Ecology and GeographyChinese Academy of SciencesUrumqi 830011China National Key Laboratory of Ecological Security and Resource Utilization in Arid Areas Xinjiang Institute of Ecology and GeographyChinese Academy of SciencesUrumqi 830011China Department of Geochemistry and Environmental Sciences School of Earth and Space SciencesUniversity of Science and Technology of ChinaHefei 230026China Department of Earth and Sciences Faculty of SciencesUniversity of KurdistanSanandajIran Department of Science Education Farhangian UniversityTehranIran

The Hesar pluton in the northern Urumieh-Dokhtar magmatic arc hosts numerous mafic-microgranular enclaves(MMEs).Whole rock geochemistry,mineral chemistry,zircon U-Pb and Sr-Nd isotopes were *** is suggested that the rocks are metaluminous(A/CNK=1.32-1.45),subduction-related I-type calc-alkaline gabbro to diorite with similar mineral assemblages and geochemical *** host rocks yielded an U-Pb crystallization age of 37.3±0.4 Ma for *** have relatively low SiO_(2) contents(52.9-56.6 wt%)and high Mg^(#)(49.8-58.7),probably reflecting a mantle-derived ***-and mantle-normalized trace element patterns are characterized by LREE and LILE enrichment,HREE and HFSE depletion with slight negative Eu anomalies(Eu/Eu^(*)=0.86-1.03).The host rocks yield(^(87)Sr/^(86)Sr)_(i) ratios of 0.70492-0.70510,positive ε_(Nd)(t)values of+1.55-+2.06 and T_(DM2)of 707-736 Ma,which is consistent with the associated mafic microgranular enclaves((^(87)Sr/^(86)Sr)_(i)=0.705014,ε_(Nd)(t)=+1.75,T_(DM2)=729 Ma).All data suggest magma-mixing for enclave and host rock formation,showing a complete equilibration between mixed-mafic and felsic magmas,followed by rapid *** T_(DM1)(Nd)and T_(DM2)(Nd)model ages and U-Pb dating indicate that the host pluton was produced by partial melting of the lower continental crust and subsequent mixing with injected lithospheric mantlederived magmas in a pre-collisional setting of Arabian-Eurasian *** composition indicates a crystallization temperature of~1000℃ and a depth of~9 km.

关键词： enclave magma mixing zircon U-Pb dating Urumieh-Dokhtar magmatic arc

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Effect of CO_(2)exposure on the mechanical strength of geopolymerstabilized sandy soils

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Journal of Rock Mechanics and Geotechnical Engineering 2024年第2期16卷 670-681页

作者： Hamid Reza Razeghi Armin Geranghadr fatemeh Safaee Pooria Ghadir Akbar A.Javadi School of Civil Engineering Iran University of Science and TechnologyTehran***Iran Department of Engineering University of ExeterExeterEX44QFUK

In recent years,there has been growing interest in developing methods for mitigating greenhouse effect,as greenhouse gas emissions continue to contribute to global temperature *** the other hand,investigating geopolymers as environmentally friendly binders to mitigate the greenhouse effect using soil stabilization has been widely ***,the effect of CO_(2)exposure on the mechanical properties of geopolymer-stabilized soils is rarely *** this context,the effect of CO_(2)exposure on the mechanical and microstructural features of sandy soil stabilized with volcanic ash-based geopolymer was *** factors were concerned,for example the binder content,relative density,CO_(2)pressure,curing condition,curing time,and carbonate *** results showed that the compressive strength of the stabilized sandy soil specimens with 20%volcanic ash increased from 3 MPa to 11 *** was also observed that 100 kPa CO_(2)pressure was the optimal pressure for strength development among the other *** mechanical strength showed a direct relationship with binder content and carbonate ***,in the ambient curing(AC)condition,the mechanical strength and carbonate content increased with the curing ***,the required water for carbonation evaporated after 7 d of oven curing(OC)condition and as a result,the 14-d cured samples showed lower mechanical strength and carbonate content in comparison with 7-d cured ***,the rate of strength development was higher in OC cured samples than AC cured samples until 7 d due to higher geopolymerization and carbonation rate.

关键词： Soil stabilization CO_(2)effect Geopolymer

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Color and Gloss Changes of a Lignin-Based Polyurethane Coating under Accelerated Weathering

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Journal of Renewable Materials 2024年第2期12卷 305-323页

作者： fatemeh Hassani Khorshidi Saeed Kazemi Najafi Farhood Najafi Antonio Pizzi Dick Sandberg Rabi Behrooz Department of Wood Science and Technology Faculty of Natural ResourcesTarbiat Modares UniversityTehranIran Department of Resin and Additives Institute for Color Science and TechnologyP.O.Box 16765-654TehranIran LERMAB University of LorraineBlvd des AiguillettesNancy54000France Wood Science and Engineering LuleåUniversity of TechnologySkellefteåSweden

The purpose of this research study was to investigate the properties of polyurethane coatings based on lignin *** this purpose,the prepared coatings were applied to pine wood surfaces and weathered ***,color and gloss of the coatings were measured before and after the weathering *** emission scanning electron microscopy(FE-SEM)micrographs prepared from the coatings showed that the average size of nano-particles in the polyurethane substrate was approximately 500 *** magnetic resonance(13C-NMR)spectroscopy showed that strong urethane bonds were formed in the nano-lignin-based *** calorimetric analysis(DSC)test revealed that the glass-transition temperature(Tg)of lignin nanoparticles modified with diethylenetriamine(DETA)was 112.8℃ and Tg of lignin nano-particles modified with ethylenediamine(EDA)was 102.5℃,which is lower than the Tg of un-modified lignin(114.6℃)and lignin modified with DETA(126.8℃)and lignin modified with EDA(131.3℃).The coatings modified with lignin nano-particles had a greater change in *** lignin nano-particles in the modified coating are trapping hydroxyl radicals which reduces photoactivity and yellowing of the polyurethane by about 3 times compared to unmodified polyurethane *** weathering test,the nano-lignin-based coating had a rougher surface with a lower contact angle(0.78°)compared to the unmodified polyurethane coating(0.85°).

关键词： Amination propylene carbonate lignin biopolymer polyurethane coating polyol UN SDG 13

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