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Single-cell and spatial omics:exploring hypothalamic heterogeneity

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Neural Regeneration Research 2025年第6期20卷 1525-1540页

作者： Muhammad Junaid eun Jeong lee Su Bin Lim Department of Biochemistry&Molecular Biology Ajou University School of MedicineSuwonSouth Korea Department of Biomedical Sciences Graduate School of Ajou UniversitySuwonSouth Korea Department of Brain Science Ajou University School of MedicineSuwonSouth Korea

Elucidating the complex dynamic cellular organization in the hypothalamus is critical for understanding its role in coordinating fundamental body functions. Over the past decade, single-cell and spatial omics technologies have significantly evolved, overcoming initial technical challenges in capturing and analyzing individual cells. These high-throughput omics technologies now offer a remarkable opportunity to comprehend the complex spatiotemporal patterns of transcriptional diversity and cell-type characteristics across the entire hypothalamus. Current single-cell and single-nucleus RNA sequencing methods comprehensively quantify gene expression by exploring distinct phenotypes across various subregions of the hypothalamus. However, single-cell/single-nucleus RNA sequencing requires isolating the cell/nuclei from the tissue, potentially resulting in the loss of spatial information concerning neuronal networks. Spatial transcriptomics methods, by bypassing the cell dissociation, can elucidate the intricate spatial organization of neural networks through their imaging and sequencing technologies. In this review, we highlight the applicative value of single-cell and spatial transcriptomics in exploring the complex molecular-genetic diversity of hypothalamic cell types, driven by recent high-throughput achievements.

关键词： cellular diversity hypothalamus multi-omics single-cell transcriptomics spatial transcriptomics

Gut–brain axis and environmental factors in Parkinson's disease:bidirectional link between disease onset and progression

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Neural Regeneration Research 2025年第12期20卷 3416-3429页

作者： Soo Jung Park Kyung Won Kim eun Jeong lee Department of Brain Science Ajou University School of MedicineSuwonSouth Korea Department of Life Science and Multidisciplinary Genome Institute Hallym UniversityChuncheonSouth Korea

Parkinson's disease has long been considered a disorder that primarily affects the brain,as it is defined by the dopaminergic neurodegeneration in the substantia nigra and the brain accumulation of Lewy bodies containingα-synuclein *** recent decades,however,accumulating research has revealed that Parkinson's disease also involves the gut and uncovered an intimate and important bidirectional link between the brain and the gut,called the“gut–brain axis.”Numerous clinical studies demonstrate that gut dysfunction frequently precedes motor symptoms in Parkinson's disease patients,with findings including impaired intestinal permeability,heightened inflammation,and distinct gut microbiome profiles and ***,α-synuclein deposition has been consistently observed in the gut of Parkinson's disease patients,suggesting a potential role in disease ***,individuals with vagotomy have a reduced Parkinson's disease *** these observations,researchers have hypothesized thatα-synuclein accumulation may initiate in the gut and subsequently propagate to the central dopaminergic neurons through the gut–brain axis,leading to Parkinson's *** review comprehensively examines the gut's involvement in Parkinson's disease,focusing on the concept of a gut-origin for the *** also examine the interplay between altered gut-related factors and the accumulation of pathologicalα-synuclein in the gut of Parkinson's disease *** the accessibility of the gut to both dietary and pharmacological interventions,targeting gut-localizedα-synuclein represents a promising avenue for developing effective Parkinson's disease therapies.

关键词： gut inflammation gut microbiome gut-brain axis micro/nano-plastics Parkinson’s disease α-synuclein

Novel mouse model of Alzheimer's disease exhibits pathology through synergistic interactions among amyloid-β,tau, and reactive astrogliosis

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Zoological Research 2025年第01期 41-53页

作者： Young-eun Han Sunhwa Lim Seung eun lee Min-Ho Nam Soo-Jin Oh Brain Science Institute Korea Institute of Science and Technology (KIST) Research Animal Resources Center Korea Institute of Science and Technology (KIST)

Alzheimer'sdisease(AD)isaprogressive neurodegenerative disorder characterized by cognitive impairment and distinct neuropathological features,including amyloid-β plaques, neurofibrillary tangles, and reactive astrogliosis. Developing effective diagnostic,preventative, and therapeutic strategies for AD necessitates the establishment of animal models that accurately recapitulate the pathophysiological processes of the disease. Existing transgenic mouse models have significantly contributed to understanding AD pathology but often fail to replicate the complexity of human ***, these models are limited in their ability to elucidate the interplay among amyloid-β plaques,neurofibrillary tangles, and reactive astrogliosis due to the absence of spatially and temporally specific genetic manipulation. In this study, we introduce a novel AD mouse model(APP/PS1-TauP301L-Adeno mice) designed to rapidly induce pathological symptoms and enhance understanding of AD mechanisms. Neurofibrillary tangles and severe reactive astrogliosis were induced by injecting AAVDJ-EF1a-hTauP301L-EGFP and Adeno-GFAP-GFP viruses into the hippocampi of 5-month-old APP/PS1 *** months post-injection, these mice exhibited pronounced astrogliosis, substantial amyloid-β plaque accumulation,extensiveneurofibrillarytangles,accelerated neuronal loss, elevated astrocytic GABA levels, and significant spatial memory deficits. Notably,these pathological features were less severe in AAVTauP301L-expressing APP/PS1 mice without augmented reactive astrogliosis. These findings indicate an exacerbating role of severe reactive astrogliosis in amyloid-β plaque and neurofibrillary tangle-associated pathology. The APP/PS1-TauP301L-Adeno mouse model provides a valuable tool for advancing therapeutic research aimed at mitigating the progression of AD.

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Extraction of rare earth elements from neodymium(NdFeB) magnet scrap using magnesium halides

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Journal of Rare Earths 2025年第2期43卷 371-376页

作者： Sung Gue Heo Jae Yeol Yang Soong Ju Oh seok-Jun Seo Mi Hye lee Kyoung-Tae Park Korea Institute for Rare Metals Korea Institute of Industrial Technology Department of Materials Science and Engineering Korea University

The demand for neodymium（NdFeB） permanent magnets for electric vehicles and eco-friendly generators is ***,NdFeB magnets contain rare earth elements（REEs）,which are limited in *** this study,we performed an exchange reaction between magnesium halides（fluoride and chloride） and waste NdFeB scrap and then compared the characteristics of the extracted halides *** compositions of the ternary Mg fluoride（LiF:NaF:MgF2=50:40:10 in mole ratio） and chloride（LiCl:NaCl:MgCl2=10:50:40 in mole ratio） salts were thermodynamically determined for achieving low eutectic *** reactions between the NdFeB scrap powder（1-2 mm） and Mg halide salts were carried out at 1073 and 873 K for the fluoride and chloride systems,respectively,in an argon *** the reaction,we separated Nd halide from the residual salt and evaluated the Ndextraction *** phase formation of the salt was analyzed using X-ray diffraction（XRD）,and the extraction rate of Nd was analyzed using inductively coupled plasma optical emission spectroscopy（ICPOES）.Nd was extracted in the form of Nd halide（NdF3or NdCl3）,and the extraction rates in the fluoride and chloride systems are 98.64% and 84.59%,***,the fluoride system is more effective than the chloride system for Nd *** study provides a comprehensive comparative analysis of the effectiveness of fluo ride and chlo ride systems in extracting REEs from NdFeB magnet *** study findings can be used to develop an effective method for recycling magnet scraps.

关键词： Fluoride system Magnesium halide Metal-scrap recycling Nd extraction Neodymium magnet Rare earth elements

Clinical and endoscopic characteristics of colorectal traditional serrated adenomas with dysplasia/adenocarcinoma in a Korean population

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World Journal of Gastrointestinal Oncology 2025年第2期17卷 119-131页

作者： Ki-Hyun Kim eun Myung Hyung Hoon Oh Chan-Muk Im Young-eun Seo Je-Seong Kim Chae-June Lim Ga-Ram You Sung-Bum Cho Wan-Sik lee Myung-Giun Noh Kyung-Hwa lee Young-eun Joo Department of Internal Medicine Chonnam National University Medical SchoolHwasun-eup 58128South Korea Department of Pathology Chonnam National University Medical SchoolHwasun-eup 58128South Korea

BACKGROUND Traditional serrated adenoma(TSA)is a rare and precancerous lesion of colorectal *** clinical and endoscopic differentiations between TSAs without dysplasia or adenocarcinoma(TSAOs)and TSAs with dysplasia or adenocarcinoma(TSADs)remain *** To evaluate the characteristics of colorectal TSAs and compare the characteristics of TSAOs with those of *** This retrospective study included 193 patients who underwent endoscopic resection and received a pathologic diagnosis of *** reviewed the medical,endoscopic,and histopathologic records of patients who underwent endoscopic resection of TSAs between January 2010 and December *** TSAs were more frequently located in the rectosigmoid *** TSAs had 0-Ip,0-Isp,or 0-Is *** TSAD lesions were larger than TSAO *** lesions more commonly had a red color and an irregular border than TSAO *** were usually treated using conventional endoscopic mucosal resection,whereas TSADs were treated using conventional endoscopic mucosal resection,endoscopic submucosal dissection,and ***-polypectomy bleeding was more common with TSADs than with *** analysis showed that gastrointestinal bleeding,red color,0-IIa,irregular border,and lobular mucosal surface were significantly associated with *** analysis showed that gastrointestinal bleeding,an irregular border,and a lobular mucosal surface were significantly associated with *** TSAs with gastrointestinal bleeding,an irregular border,and a lobular mucosal surface are associated with an increased risk of dysplasia or adenocarcinoma.

关键词： Traditional serrated adenoma Dysplasia Carcinoma Endoscopic features Gastrointestinal bleeding

Adenosine triphosphate-binding pocket inhibitor for mixed lineage kinase domain-like protein attenuated alcoholic liver disease via necroptosis-independent pathway

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World Journal of Gastroenterology 2025年第6期31卷 44-61页

作者： Han-Ning Xuan Yuan Hyun Sung Kim Gye Ryeol Park Jae eun Ryu Ji eun Kim In Young Kang Hye Young Kim Seung Min lee Ju Hee Oh Eileen L Yoon Dae Won Jun Department of Internal Medicine Hanyang University School of MedicineSeoul 04763South Korea Department of Pathology Hanyang University School of MedicineSeoul 04763South Korea Department of Translational Medicine Graduate School of Biomedical Science and EngineeringHanyang UniversitySeoul 04763South Korea Department of Obstetrics and Gynecology Institute of Women’s Medical Life ScienceYonsei Cancer CenterSeverance HospitalYonsei University College of MedicineSeoul 04763South Korea Department of Internal Medicine Sanggye Paik HospitalInje University College of MedicineSeoul 01757South Korea

BACKGROUND Mixed lineage kinase domain-like protein(MLKL)serves as a critical mediator in necroptosis,a form of regulated cell death linked to various liver *** study aims to specifically investigate the role of MLKL’s adenosine triphosphate(ATP)-binding pocket in facilitating necroptosis-independent pathways that may contribute to liver disease *** focusing on this mechanism,we seek to identify potential therapeutic targets that can modulate MLKL activity,offering new strategies for the prevention and treatment of liver-related *** To investigate the possibility of using the ATP-binding pocket-associated,necro-ptosis-independent MLKL pathway as a target for liver *** Cell death following necroptosis stimuli was evaluated using cell proliferation assays,flow cytometry,and electron microscopy in various *** human liver organoid system was used to evaluate whether the MLKL ATP pocket-binding inhibitor could attenuate ***,alcoholic and non-alcoholic fatty liver diseases animal models were used to determine whether MLKL ATP pocket inhibitors could attenuate liver *** While an MLKL ATP pocket-binding inhibitor did not prevent necroptosis-induced cell death in RAW 264.7 cells,it did reduce the necroptosis-led expression of CXCL2,ICAM,and ***,MLKL ATP pocket inhibitor diminishes the expression of CXCL2,ICAM,and VCAM by inhibiting the IκB kinase and nuclear factor kappa-B pathways without inducing necroptosis-induced cell death in two-dimensional cell culture as well as the human-derived liver organoid *** MLKL ATP-binding inhibitor was ineffective in non-alcoholic fatty liver disease animal models,MLKL ATP-binding inhibitor attenuated hepatic inflammation in the alcoholic liver disease *** MLKL ATP pocket-binding inhibitor exerted anti-inflammatory effects through the necroptosis-independent MLKL pathway in an animal model of alcoholic liver disease.

关键词： RAW 264.7 cell Cell death Necroptosis Mixed lineage kinase domain-like protein Non-alcoholic fatty liver disease Mixed lineage kinase domain-like protein adenosine triphosphate binding inhibitor Alcoholic liver disease

Extended protective effects of three dimensional cultured human mesenchymal stromal cells in a neuroinflammation model

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World Journal of Stem Cells 2025年第1期17卷 53-65页

作者： Ok-Hyeon Kim Hana Kang eun Seo Chang Younghyun Lim Young-Jin Seo Hyun Jung lee Department of Anatomy and Cell Biology College of MedicineChung-Ang UniversitySeoul 06974South Korea Department of Global Innovative Drugs Graduate School of Chung-Ang UniversitySeoul 06974South Korea Department of Life Science Chung-Ang UniversitySeoul 06974South Korea

BACKGROUND Human mesenchymal stromal cells(MSCs)possess regenerative potential due to pluripotency and paracrine ***,their stemness and immunomod-ulatory capabilities are sub-optimal in conventional two-dimensional(2D)*** To enhance the efficiency and therapeutic efficacy of MSCs,an in vivo-like 3D culture condition was *** MSCs were cultured on polystyrene(2D)or in a gellan gum-based 3D *** vitro,prostaglandin-endoperoxide synthase 2,indoleamine-2,3-dioxygenase,heme oxygenase 1,and prostaglandin E synthase gene expression was quantified by quantitative real-time polymerase chain *** were incubated with lipopolysaccharide(LPS)-treated mouse splenocytes,and prostaglandin E2 and tumor necrosis factor-alpha levels were measured by enzyme linked immuno-sorbent *** vivo,LPS was injected into the lateral ventricle of mouse brain,and MSCs were administered intravenously the next *** were sacrificed and analyzed on days 2 and *** Gellan gum polymer-based 3D culture significantly increased expression of octamer-binding transcription factor 4 and Nanog homeobox stemness markers in human MSCs compared to 2D *** 3D environment also heightened expression of cyclooxygenase-2 and heme-oxygenase 1,enzymes known for immunomodulatory functions,including production of prostaglandins and heme degradation,*** in 3D culture secreted more prostaglandin E2 and effectively suppressed tumor necrosis factor-alpha release from LPS-stimulated splenocytes and surpassed the efficiency of MSCs cultured in *** a murine neuroinflammation model,intravenous injection of 3D-cultured MSCs significantly reduced ionized calcium-binding adaptor molecule 1 and glial fibrillary acidic protein expression,mitigating chronic inflammation more effectively than 2D-cultured *** The microenvironment established in 3D culture serves as an in vivo mimetic,enhancing the immunomodulatory function of *** sugge

关键词： Mesenchymal stromal cells Three-dimensional culture Immunomodulatory function Neuroinflammation Cell therapy

Advancements in Passive Wireless Sensing Systems in Monitoring Harsh Environment and Healthcare Applications

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Nano-Micro Letters 2025年第5期17卷 145-192页

作者： Wei Yue Yunjian Guo Jong‐Chul lee Enkhzaya Ganbold Jia-Kang Wu Yang Li Cong Wang Hyun Soo Kim Young-Kee Shin Jun-Ge Liang eun-Seong Kim Nam-Young Kim RFIC Bio Centre Kwangwoon UniversitySeoul 01897South Korea Department of Electronic Convergence Engineering Kwangwoon UniversitySeoul 01897South Korea Department of Electronic Engineering Jiangnan UniversityWuxi 214122People’s Republic of China School of Microelectronics Shandong UniversityJinan 250101People’s Republic of China School of Electronics and Information Engineering Harbin Institute of TechnologyHarbin 150001People’s Republic of China Department of Electronics Engineering Kwangwoon UniversitySeoul 01897South Korea Laboratory of Molecular Pathology and Cancer Genomics Department of Molecular Medicine and Biopharmaceutical SciencesGraduate School of Convergence Science and TechnologySeoul National UniversitySeoul 08826South Korea

Recent advancements in passive wireless sensor technology have significantly extended the application scope of sensing,particularly in challenging environments for monitoring industry and healthcare *** systems are equipped with battery-free operation,wireless connectivity,and are designed to be both miniaturized and *** features enable the safe,real-time monitoring of industrial environments and support high-precision physiological measurements in confined internal body spaces and on wearable epidermal *** the exploration into diverse application environments,the development of a systematic and comprehensive research framework for system architecture remains elusive,which hampers further optimization of these *** review,therefore,begins with an examination of application scenarios,progresses to evaluate current system architectures,and discusses the function of each component—specifically,the passive sensor module,the wireless communication model,and the readout module—within the context of key implementations in target sensing ***,we present case studies that demonstrate the feasibility of proposed classified components for sensing scenarios,derived from this systematic *** outlining a research trajectory for the application of passive wireless systems in sensing technologies,this paper aims to establish a foundation for more advanced,user-friendly applications.

关键词： Wireless sensing Passive detection Harsh environment Biomedical monitoring Flexible sensors

Cellulose Elementary Fibrils as Deagglomerated Binder for High-Mass-Loading Lithium Battery Electrodes

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Nano-Micro Letters 2025年第5期17卷 281-296页

作者： Young-Kuk Hong Jung-Hui Kim Nag-Young Kim Kyeong-seok Oh Hong-I Kim seokhyeon Ryu Yumi Ko Ji-Young Kim Kwon-Hyung lee Sang-Young lee Department of Chemical and Biomolecular Engineering Yonsei University50 Yonsei-RoSeodaemun-GuSeoul 03722Republic of Korea Advanced Analysis and Data Center Korea Institute of Science and Technology(KIST)Seoul 02792Republic of Korea Ulsan Advanced Energy Technology R&D Center Korea Institute of Energy Research(KIER)Ulsan 44776Republic of Korea Department of Battery Engineering Yonsei University50 Yonsei-RoSeodaemun-GuSeoul 03722Republic of Korea

Amidst the ever-growing interest in high-mass-loading Li battery electrodes,a persistent challenge has been the insufficient continuity of their ion/electron conduction ***,we propose cellulose elementary fibrils(CEFs)as a class of deagglomerated binder for high-mass-loading *** from natural wood,CEF represents the most fundamental unit of cellulose with nanoscale *** preparation of the CEFs involves the modulation of intermolecular hydrogen bonding by the treatment with a proton acceptor and a hydrotropic *** elementary deagglomeration of the cellulose fibers increases surface area and anionic charge density,thus promoting uniform dispersion with carbon conductive additives and suppressing interfacial side reactions at ***,a homogeneous redox reaction is achieved throughout the *** resulting CEF-based cathode(overlithiated layered oxide(OLO)is chosen as a benchmark electrode active material)exhibits a high areal-mass-loading(50 mg cm^(-2),equivalent to an areal capacity of 12.5 mAh cm^(-2))and a high specific energy density(445.4 Wh kg–1)of a cell,which far exceeds those of previously reported OLO *** study highlights the viability of the deagglomerated binder in enabling sustainable high-mass-loading electrodes that are difficult to achieve with conventional synthetic polymer binders.

关键词： Cellulose elementary fibrils Deagglomeration Electrode binders Lithium batteries High-mass-loading