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Taxonomic monograph of epifoliar fungi

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Fungal Diversity 2023年第4期121卷 139-334页

作者： D.S.Marasinghe S.Hongsanan X.Y.Zeng e.B.G.jones P.Chomnunti S.Boonmee K.D.Hyde Center of excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Mushroom Research Foundation 128 M.3 Ban Pa Deng T.Pa PaeA.Mae TaengChiang Mai 50150Thailand Innovative Institute for Plant Health Zhongkai University of Agriculture and EngineeringGuangzhou 510225People’s Republic of China Faculty of Sciences Research Center of Microbial Diversity and Sustainable UtilizationChiang Mai UniversityChiang Mai 50200Thailand Department of Plant Pathology College of AgricultureGuizhou UniversityGuiyang 550025China Nantgaredig 33B St.Edwards RoadSouthsea PO53DHHantsUK Department of Biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand Department of Botany and Microbiology College of ScienceKing Saud UniversityP.O Box 2455Riyadh 11451Kingdom of Saudi Arabia Shenzhen Key Laboratory of Microbial Genetic engineering College of Life Sciences and OceanographyShenzhen UniversityShenzhen 518060GuangdongPeople’s Republic of China

epifoliar fungi are one of the significant fungal groups typically living on the surface of leaves. They are usually recordedas saprobes, obligate parasites and commensals and are widely distributed in tropical and subtropical regions. Numerousgenera within this group remain inadequately understood, primarily attributed to limited taxonomic knowledge and insufficientmolecular data. Furthermore, the taxonomic delineation of epifoliar fungi remained uncertain, with scattered andliterature-based data often intermixed with other follicolous fungi. Herein, a comprehensive taxonomic monograph of 124genera in (32) Asterinales, (18) Capnodiales, (15) Chaetothyriales, (8) Meliolales, (8) Micropeltidales, (10) Microthyriales,(32) Parmulariales and (1) Zeloasperisporiales was provided re-describing with illustrations and line drawings. Notes onecological and economic importance of the families are also provided. Representatives type herbarium materials of Campoapulcherrima, Cycloschizon brachylaenae, Ferrarisia philippina, Hysterostomella guaranitica, Palawaniella orbiculata andPseudolembosia orbicularis of Parmulariaceae were re-examined and provided updated illustrations with descriptions. Abackbone phylogenetic tree and divergence estimation analysis for epifoliar fungi based on LSU and 5.8s ITS sequence dataare provided.

关键词： Divergence Follicolous Obligate Parmulariaceae Tropical

Steel slag carbonation in a flow-through reactor system:The role of fluid-flux

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Journal of environmental Sciences 2015年第1期27卷 266-275页

作者： eleanor J.Berryman Anthony e.Williams-jones Artashes A.Migdisov Department of earth and Planetary Sciences McGill University Technische Universitat Berlin Los Alamos National Laboratory

Steel production is currently the largest industrial source of atmospheric CO2. As annual steel production continues to grow, the need for effective methods of reducing its carbon footprint increases correspondingly. The carbonation of the calcium-bearing phases in steel slag generated during basic oxygen furnace（BOF） steel production, in particular its major constituent, larnite {Ca2SiO4}, which is a structural analogue of olivine {（MgFe）2SiO4}, the main mineral subjected to natural carbonation in peridotites, offers the potential to offset some of these emissions. However, the controls on the nature and efficiency of steel slag carbonation are yet to be completely understood. experiments were conducted exposing steel slag grains to a CO2–H2O mixture in both batch and flow-through reactors to investigate the impact of temperature, fluid flux, and reaction gradient on the dissolution and carbonation of steel slag. The results of these experiments show that dissolution and carbonation of BOF steel slag are more efficient in a flow-through reactor than in the batch reactors used in most previous studies. Moreover, they show that fluid flux needs to be optimized in addition to grain size, pressure, and temperature, in order to maximize the efficiency of carbonation. Based on these results, a two-stage reactor consisting of a high and a low fluid-flux chamber is proposed for CO2 sequestration by steel slag carbonation,allowing dissolution of the slag and precipitation of calcium carbonate to occur within a single flow-through system.

关键词： CO2sequestration Steel slag carbonation Flow-through reactor Fluid flux

A survey of image-based computational learning techniques for frost detection in plants

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Information Processing in Agriculture 2023年第2期10卷 164-191页

作者： Sayma Shammi Ferdous Sohel Dean Diepeveen Sebastian Zander Michael G.K.jones Discipline of Information Technology Murdoch UniversityMurdochWA 6150Australia Centre for Crop and Food Innovation Food Futures InstituteMurdoch UniversityMurdochWA 6150Australia Department of Primary Industries and Regional Development Western AustraliaSouth PerthWA 6151Australia

Frost damage is one of the major concerns for crop growers as it can impact the growth of the plants and hence,*** detection of frost can help farmers mitigating its *** the past,frost detection was a manual or visual ***-based techniques are increasingly being used to understand frost development in plants and automatic assessment of damage resulting from *** research presents a comprehensive survey of the state-of the-art methods applied to detect and analyse frost stress in *** identify three broad computational learning approaches i.e.,statistical,traditional machine learning and deep learning,applied to images to detect and analyse frost in *** propose a novel taxonomy to classify the existing studies based on several *** taxonomy has been developed to classify the major characteristics of a significant body of published *** this survey,we profile 80 relevant papers based on the proposed *** thoroughly analyse and discuss the techniques used in the various approaches,i.e.,data acquisition,data preparation,feature extraction,computational learning,and *** summarise the current challenges and discuss the opportunities for future research and development in this area including in-field advanced artificial intelligence systems for real-time frost monitoring.

关键词： Frost Cold stress Machine learning Image analysis Crop Plant

Graphene-Polymer Nanocomposites and Roll-to-Roll (R2R) Compatible Flexible Solid-State Supercapacitor Based on Graphene Nanoplatelets and Ionic Liquid-Polymer Gel

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Graphene 2022年第1期11卷 1-18页

作者： Jasper Chiguma eliud Mushibe Natalya Gonopolskaya Wayne e. jones Jr Department of Chemistry and Materials Science and engineering Binghamton University Binghamton NY USA

We present the electrical and supercapacitive performance of graphene nanoplatelets in polymer nanocomposites and flexible solid state electrical double layer capacitors (eDLC) respectively. Graphene-doped poly (3,4-... 详细信息

e="margin-left:10.0pt;"> We present the electrical and supercapacitive performance of graphene nanoplatelets in polymer nanocomposites and flexible solid state electrical double layer capacitors (EDLC) respectively. Graphene-doped poly (3,4-ethylenedioxythiophene) (PEDOT) coated polyethylene terephthalate (PET) and glass exhibited transmittance above 95% and electrical conductivity of 2.70 × 10ˉ1 S·cmˉ1e="font-family:Verdana;"> and 9.01 × 10ˉ1 S·cmˉ1e="font-family:Verdana;"> respectively. Graphene loaded polymethyl methacrylate (PMMA) and polystyrene (PS) nanocomposites showed electrical conductivity as high as 2.11 × 10e="color:#4F4F4F;font-family:-app

关键词： Flexible Supercapacitors Specific Capacitance Graphene Roll-to-Roll Nanocomposites Farads

Hexavalent Chrome: Threshold Concept for Carcinogenicity

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Biomedical and environmental Sciences 1990年第1期3卷 20-34页

作者： ROSS e.jones Texas Instruments MS 8308 P.O. Box 655303 Dallas Texas 75265

Certain hexavalent chromium (Cr^(6+)) compounds when administered via inhalation at high doses have the potential to induce lung tumors in humans and experimental animals. Trivalent chromium (Cr^(3+)) is an essential human and animal nutrient at levels of 50 to 200 μg/day. Recent data have shown that the human body is able to reduce Cr^(6+) to Cr^(3+). This reduction occurs in bodily fluids such as gastric juice, epithelial lining fluid *** respiratory tract, blood, and other fluids. Secondary reduction occurs at the cellular level by the cytosol, mitochondria, and microsomes. Thus, at low levels of exposure hexavalent chromium ions are reduced befor the 6+ ions can interact with DNA unless the dose is sufficient to overwhelm the body's reduction capacity. This paper summarizes the available data concerning the reducing ability of the body and formulates the steps in the mechanism of cancer induction. These steps include: (1) only certain Cr^(6+) compounds have the capacity to interact with cellular components; (2) Cr^(6+) is reduced by body fluids and excess Cr^(6+) enters the cell (Cr^(3+) is poorly absorbed across membranes); (3) cellular organelles and the cytoplasm reduce Cr^(6+) to Cr^(3+); (4) excess Cr^(6+) can enter the nucleus; (5) Cr^(6+) reduction through 5+ and 4+ to 3+ has a potential to interact with the DNA molecule; and (6) if unrepaired, this DNA damage can lead to cancer induction. On the basis of current evidence Cr^(6+) has a threshold for carcinogenic potential in humans that is greater than the current TLV. 1990 Academic Press. Inc.

关键词： DNA Threshold Concept for Carcinogenicity Hexavalent Chrome

A New Cytotoxic Sterol Produced by an endophytic Fungus from Castaniopsis fissa at the South China Sea Coast

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Chinese Chemical Letters 2004年第4期15卷 419-422页

作者： HouJinLI YongChengLIN L.L.P.VRIJMOeD e.B.G.jones DepartmentofAppliedChemistry ZhongshanUniversityGuangzhou510275 DepartmentofBiologyandChemistry CityUniversityofHongKongHongKong

A new sterol, ergosta-8(9),22-diene-3,5,6,7-tetraol(3β,5α,6β,7α,22e)(A) together with three known sterols: 3β, 5α,6β-trihydroxyergosta-7,22-diene (B), 3β-hydroxy-5α,8α- epidioxyer-gosta-6,22-diene (C) and ergosterol (D) were isolated from the mycelia of an unidentified endophytic fungus separated from Castaniopsis fissa (chestnut tree). Compound A exhibited potent selective cytotoxicity against Bel-7402, NCI4460 and L-02 cell lines with IC50 values 8.445, 5.03, 13.621 μg/mL, respectively.

关键词： endophytic fungus sterols ergosta-8(9) 22-diene-3,5,6,7-tetraol (3β,5α,6β,7α,22e) cytotoxicity.

Taxonomy,phylogeny,molecular dating and ancestral state reconstruction of Xylariomycetidae(Sordariomycetes)

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Fungal Diversity 2022年第1期112卷 1-88页

作者： Milan C.Samarakoon Kevin D.Hyde Sajeewa S.N.Maharachchikumbura Marc Stadler e.B.Gareth jones Itthayakorn Promputtha Nakarin Suwannarach erio Camporesi Timur S.Bulgakov Jian-Kui Liu School of Life Science and Technology Center for Informational BiologyUniversity of Electronic Science and Technology of ChinaChengdu 611731People’s Republic of China Research Center in Bioresources for Agriculture Industry and MedicineChiang Mai UniversityChiang Mai 50200Thailand Department of Biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand Center of excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Mushroom Research Foundation 128 M.3 Ban Pa Deng T.Pa PaeA.Mae TaengChiang Mai 50150Thailand Institute of Microbiology Technische Universität BraunschweigSpielmannstraße 738106 BrunswickGermany Department of Botany and Microbiology College of ScienceKing Saud UniversityP.O Box 2455Riyadh 11451Kingdom of Saudi Arabia Research Center of Microbial Diversity and Sustainable Utilization Chiang Mai UniversityChiang Mai 50200Thailand A.M.B.Gruppo Micologico Forlivese"Antonio Cicognani"Via Roma 18ForliItaly Department of Plant Protection Federal Research Centre the Subtropical Scientific Centre of the Russian Academy of SciencesYana Fabritsiusa Street 2/28SochiKrasnodar RegionRussia 354002

Xylariomycetidae(Ascomycota)is a highly diversified group with variable stromatic *** research focused on inconspicuous stromatic xylarialean taxa from China,Italy,Russia,Thailand and the United *** morpho-logical descriptions,illustrations and combined ITS-LSU-rpb2-tub2-tef1 phylogenies revealed 39 taxa from our collections belonging to Amphisphaeriales and Xylariales.A new family(Appendicosporaceae),five new genera(Magnostiolata,Mela-nostictus,Neoamphisphaeria,Nigropunctata and Paravamsapriya),27 new species(Acrocordiella photiniicola,Allocryp-tovalsa sichuanensis,Amphisphaeria parvispora,Anthostomella lamiacearum,Apiospora guiyangensis,***,Biscogniauxia magna,eutypa camelliae,Helicogermslita clypeata,Hypocopra zeae,Magnostiolata mucida,Melanostictus longiostiolatus,***,Nemania longipedicellata,***,***,***,Neoamphispha-eria hyalinospora,Neoanthostomella bambusicola,Nigropunctata bambusicola,***,***,Occul-titheca rosae,Paravamsapriya ostiolata,Peroneutypa leucaenae,Seiridium italicum and Vamsapriya mucosa)and seven new host/geographical records are introduced and *** time estimates indicate that Delonicicolales diverged from Amphisphaeriales+Xylariales at 161(123-197)*** and Xylariales diverged 154(117-190)MYA with a crown age of 127(92-165)MYA and 147(111-184)MYA,***(Amphisphaeriales)has a stem age of 89(65-117)*** character state reconstruction indicates that astromatic,clypeate ascomata with aseptate,hyaline ascospores that lack germ slits may probably be ancestral Xylariomycetidae having plant-fungal endo-phytic *** Amphisphaeriales remained mostly astromatic with common septate,hyaline *** variations may have developed mostly during the Cretaceous *** ascospores are common in Xylariales,but they first appeared in Amphisphaeriaceae,Melogrammataceae and Sp

关键词： 33 new taxa Amphisphaeriales Appendicosporaceae evolution Stromata Xylariales

Tribute to Professor John Webster(1925–2014)

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Fungal Diversity 2015年第5期74卷 1-2页

作者： e.B.Gareth jones Kevin D.Hyde Department of Botany and Microbiology King Saudi UniversityRiyadhSaudi Arabia Center of excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand

This isssue of Fungal Diversity is dedicated to the memory of John Webster and his various contributions to mycology:an outstanding teacher and researcher,as the author of the acclaimed book Introduction to Fungi(now in its 3rd edition),the production of many films to illustrate the growth and reproduction of fungi,as President of the British Mycological Society(1969,1996 the centenary year of the BMS),for the *** in plant pathology and the garden of plant pathogens at exeter,as President of the International Mycological Association(IMA)1983–1990,for his many contributions on coprophilous and aquatic fungi and for his organising skills as the General Secretary of the 1st International Mycological Congress hosted in exeter in 1971.

关键词： claimed Webster illustrate

In Vivo Phosphorylation Site Mapping and Functional Characterization of Arabidopsis Phototropin 1

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Molecular Plant 2008年第1期1卷 178-194页

作者： Stuart Sullivan Catriona e. Thomson Douglas J. Lamont Matthew A. jones John M. Christie Plant Science Group Division of Biochemistry and Molecular Biology. Institute of Biomedical and Life Sciences University of Glasgow. University Avenue. Glasgow Scotland UK FingerPrints Proteomics Facility Post-Genomics and Molecular Interactions Centre. School of Life Sciences MSI/WTB/CIR Complex University of Dundee. Dundee Scotland UK

Phototropins （phot1 and phot2） are blue-light receptor kinases controlling a range of responses that optimize the photosynthetic efficiency of plants. Light sensing is mediated by two flavin-binding motifs, known as LOVl and LOV2, located within the N-terminal region of the protein. Photoexcitation via LOV2 leads to activation of the C-terminal kinase domain and consequently receptor autophosphorylation. However, knowledge of the in-vivo phosphorylation sites for Arabidopsis phototropins is lacking and has impeded progress in elucidating the functional significance of receptor phos- phorylation. We have purified photl from Arabidopsis and identified the in-vivo sites of receptor phosphorylation by liquid chromatography tandem mass spectrometry. Arabidopsis-derived photl binds flavin mononucleotide as chromophore and is phosphorylated at four major sites located upstream of LOV2 （Ser^58, Ser^85, Ser^350, and Ser^410）, three of which are induced by blue light. Nevertheless, structure-function analysis indicates that the biological activity of photl can be attributed to a modular unit comprising the LOV2-kinase region of the protein. Thus, peptide regions upstream of LOV2, including the sites of receptor phosphorylation identified here, do not appear to be important for receptor signaling. By contrast, these regions may be necessary for maximizing stomatal performance and possibly light-induced relocalization of photl.

关键词： Phototropins (phot1 and phot2) lavin-binding motifs