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Construction of a Rice Glycosyltransferase Phylogenomic Database and Identification of Rice-Diverged Glycosyltransferases

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Molecular Plant 2008年第5期1卷 858-877页

作者： Pei-Jian Cao Laura e. Bartley ki-Hong Jung Pamela C. Ronald Department of Plant Pathology University of California Davis CA 95616 and the Joint BioEnergy Institute Emeryville CA 94710 USA Institute of Bioinformatics Zhejiang University Hangzhou Zhejiang 310029 China

Glycosyltransferases （GTs; eC 2.4.x.y） constitute a large group of enzymes that form glycosidic bonds through transfer of sugars from activated donor molecules to acceptor molecules. GTs are critical to the biosynthesis of plant cell walls, among other diverse functions. Based on the Carbohydrate-Active enZymes （CAZy） database and sequence ***, we have identified 609 potential GT genes （loci） corresponding to 769 transcripts （gene models） in rice （oryza sativa）, the reference monocotyledonous species. Using domain composition and sequence similarity, these rice GTs were classified into 40 CAZy families plus an additional unknown class. We found that two Pfam domains of unknown function, PF04577 and PF04646, are associated with GT families GT61 and GT31, respectively. To facilitate functional analysis of this important and large gene family, we created a phylogenomic Rice GT Database （http：//ricephylogenomics. ***/cellwalls/gtJ）. Through the database, several classes of functional genomic data, including mutant lines and gene expression data, can be displayed for each rice GT in the context of a phylogenetic tree, allowing for comparative analysis both within and between GT families. Comprehensive digital expression analysis of public gene expression data revealed that most （-80%） rice GTs are expressed. Based on analysis with Inparanoid, we identified 282 ‘rice-diverged＇ GTs that lack orthologs in sequenced dicots （Arabidopsis thaliana, Populus tricocarpa, Medicago truncatula, and Ricinus communis）. Combining these analyses, we identified 33 rice-diverged GT genes （45 gene models） that are highly expressed in above-ground, vegetative tissues. From the literature and this analysis, 21 of these loci are excellent targets for functional examination toward understanding and manipulating grass cell wall qualities. Study of the remainder may reveal aspects of hormone and protein metabolism that are critical for rice biology. This list of 33 genes a

关键词： glycosyltransferases GT phylogenetic tree orthologs expression pattern mutant lines phylogenomic database rice cell wall.

Letting Go is Never easy:Abscission and Receptor- Like Protein kinases

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Journal of Integrative Plant Biology 2013年第12期55卷 1251-1263页

作者： Chad e.Niederhuth Sung ki Cho Kati Seitz John C.Walker Department of Genetics University of Georgia Division of Biological Sciences University of Missouri Interdisciplinary Plant Group University of Missouri Department of Horticulture Iowa State University

Abscission is the process by which plants discard organs in response to environmental cues/stressors, or as part of their normal development. Abscission has been studied throughout the history of the plant sciences and in numerous species. Although long studied at the anatomical and physiological levels, abscission has only been elucidated at the molecular and genetic levels within the last two decades, primarily with the use of the model plant Arabidopsis thaliana. This has led to the discovery of numerous genes involved at all steps of abscission, including key pathways involving receptor-like protein kinases （RLKs）. This review covers the current knowledge of abscission research, highlighting the role of RLKs.

关键词： Abscission abscission zone cell separation cell wall remodeling receptor-like protein kinase.

Coordination polymers： Challenges and future scenarios for capture and degradation of volatile organic compounds

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Nano Research 2016年第11期9卷 3181-3208页

作者： Kowsalya Vellingiri Pawan Kumar ki-Hyun kim Department of Civil and environmental engineering Hanyang uniVersity 222 Wangsimni-RoSeoul 04763Republic of Rorea Department of Nano Sciences and Materials Central University of Jammu Jammu 181143 India

over the past few decades, coordination polymers/metal organic frameworks （CPs/MoFs） have drawn a great deal of attention for diverse applications due to their advantages of intrinsically ttLnable chemical structure, flexible architecture, high pore volume, high surface area, multifunctional properties, etc. To date, numerous CPs/MoFs have been developed and employed for the treatment and control of gaseous pollutants, such as volatile organic compounds （VoCs）, through capture, sorptive removal, and catalytic degradation. Nevertheless, there are also some key drawbacks and challenges for the practical application of these systems （e.g., poor selectivity, high energy （and fiscal） cost, high synthesis cost, low capacity, and difficulties in regeneration and recycling）. In this review, recent developments in CPs/MoFs research are described with their associated mechanisms for capture, sorptive removal, and catalytic degradation of VoCs. To this end, we discuss the key variables and challenges for afforded abatement of VoCs through CPs/MoFs technologies. Hopefully, this review will help the scientific community set future directions for the advancement of CPs/MoFs techniques for the effective management of diverse environmental issues.

关键词： coordination polymers/metal organic frameworks(CPs/MoFs) volatile organic compounds sorptive removalcatalytic degradation

Lightweight porous silica foams with extreme-low dielectric permittivity and loss for future 6G wireless communication technologies

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Nano Research 2021年第5期14卷 1450-1456页

作者： Petra S.Pálvölgyi Daniel Sebők Imre Szenti eva Bozo Henri ervasti olli Pitkänen Jari Hannu Heli Jantunen Marko e.Leinonen Sami Myllymäki Akos Kukovecz Krisztian Kordas Microelectronics Research Unit Faculty of Information and Electrical EngineeringUniversity of OuluP.O.Box 4500FI-90570OuluFinland Interdisciplinary excellence Centre Department of Applied and Environmental ChemistryUniversity of SzegedRerrich Béla tér 1H-6720SzegedHungary Centre for Wireless Communications University of OuluP.O.Box 4500FI-90570OuluFinland

In the next generation wireless communication systems operating at near terahertz frequencies, dielectric substrates with the lowest possible permittivity and loss factor are becoming essential. In this work, highly porous (98.9% ± 0.1%) and lightweight silica foams (0.025 ± 0.005 g/cm3), that have extremely low relative permittivity (εr = 1.018 ± 0.003 at 300 GHz) and corresponding loss factor (tan δe synthetized by a template-assisted sol-gel method. After dip-coating the slabs of foams with a thin film of cellulose nanofibers, sufficiently smooth surfaces are obtained, on which it is convenient to deposit electrically conductive planar thin films of metals important for applications in electronics and telecommunication devices. Here, micropatterns of Ag thin films are sputtered on the substrates through a shadow mask to demonstrate double split-ring resonator metamaterial structures as radio frequency filters operating in the sub-THz band.

关键词： low-permittivity materials low-loss dielectrics templated sol-gel synthesis silica foams 6G telecommunication

Local Meteorological and Synoptic Characteristics of Fogs Formed over Incheon International Airport in the West Coast of Korea

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Advances in Atmospheric Sciences 2010年第4期27卷 761-776页

作者： Chang ki kiM Seong Soo YUM Department of Atmospheric Sciences Yonsei University 134 Shinchon-dong Seodaemun-gu Seoul 120-749 Korea

Fogs observed over Incheon international airport （IIA） in the west coast of Korea from January 2002 to August 2006 are classified into categories of coastal fog, cold sea fog, and warm sea fog based on the areal extent of the fogs and the difference between the air temperature （T ） and the SST, i.e., cold sea fog if TSST = T -SST 〉 0~0C and warm sea fog if TSST 〈 0~0C. The numbers of coastal, cold, and warm sea fog cases are 64, 26, and 9. Coastal fogs form most frequently in winter, while cold sea fogs occur mostly in summer and warm sea fogs are observed from January to May but not in November and December. on average the air gets colder by 1.6~0C during the three hours leading up to the coastal fog formation, and an additional cooling of 1.1~0C occurs during the fog. The change in the dew point temperature （T_d） is minimal except during the fog （0.6~0C）. Decreases in T for the cold and warm sea fogs are relatively smaller. The average Td is higher than SST during the cold sea fog periods but this T_d is more than 4~0C higher than that for the corresponding non-fog days, suggesting that cold sea fogs be formed by the cooling of already humid air （i.e., T_d〉SST）. Increases of T_d are significant during the warm sea fog periods （1.4~0C）, implying that effcient moisture supply is essential to warm sea fog formation. Four major synoptic patterns are identified in association with the observed fogs. The most frequent is a north Pacific high that accounts for 38% of cases. Surface or upper inversions are present in 77%, 69%, and 81% of the fog periods for coastal, cold, and warm sea fogs, respectively.

关键词： costal fogs sea fogs west coast of Korea meteorological and synoptic characteristics

Particle size and packing characterization by diffuse light transmission

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Particuology 2012年第5期10卷 619-627页

作者： Henrik ehlers Jyrki Heinmki Jouko Yliruusi Division of Pharmaceutical Technology Faculty of Pharmacy P.O. Box 56 (Viikinkaari 5 E) FI-00014 University of Helsinki Finland Pharmaceutical Sciences Laboratory Department of Biosciences bo Akademi University BioCity Artillerigatan 6 20520 Turku Finland Department of Pharmacy Faculty of Medicine University of Tartu Nooruse 1 50411 Tartu Estonia

Particle size, packing density and blend composition of glass ballotini, microcrystalline cellulose pellets and theophylline granules were studied by diffuse light transmission. Diffuse visible light was directed to the sample and the intensity of the light transmitted to the opposite side of the sample was measured through a diffusing lens using a phototransistor, Light transmission was found to decrease with decreasing particle size and with increasing packing density, There was a correlation, though somewhat irregular, between light transmission and particle size for glass ballotini and microcrystalline cellulose pellets, and a strong near-linear correlation between light transmission and particle size for theophylline granules, The effect of packing density on light transmission was significant, Differentiating the composition of binary blends of microcrystalline cellulose pellets and glass ballotini and blends of theophylline granules was found possible on the basis of light transmission, The method proposed showed potential as a rapid, simple and inexpensive analytical tool for basic process diagnostics,

关键词： Light transmissionParticle sizePacking densityConvectionSegregation

Memristor based object detection using neural network

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High-Confidence Computing 2022年第4期2卷 52-56页

作者： Ravikumar ki Sukumar R Department of e&Ce Jain UniversityBangaloreKarnatakaIndia Department of e&Ce Jain Institute of TechnologyDavangereKarnatakaIndia

With the increasing growth of AI,big data analytics,cloud computing,and Internet of Things applications,devel-oping memristor devices and related hardware systems to compute the deep learning application needs extensive data calculations with low power consumption and lesser chip *** learning model is one of the AI methods which is gaining importance in object detection,natural language processing,and pattern recognition.A large amount of data handling is essential for driving the deep learning model with less power *** address these issues,the paper proposed the Memristor-based object detection on the CIFAR-10 dataset and achieved an accuracy of 85 *** memtorch package in python is employed to predict the objects for implementation.

关键词： Memristor Deep learning object detection CIFAR-10

Airborne bioaerosols and their impact on human health

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Journal of environmental Sciences 2018年第5期30卷 23-35页

作者： ki-Hyun kim ehsanul Kabir Shamin Ara Jahan Department of Civil and environmental engineering Hanyang UniversitySeoul 04763Republic of Korea Department of Farm Power&MachineryBangladesh Agricultural UniversityMymensinghBangladesh BRAC Clinic DhakaBangladesh

Bioaerosols consist of aerosols originated biologically such as metabolites, toxins, or fragments of microorganisms that are present ubiquitously in the environment. International interests in bioaerosols have increased rapidly to broaden the pool of knowledge on their identification,quantification, distribution, and health impacts（e.g., infectious and respiratory diseases,allergies, and cancer）. However, risk assessment of bioaerosols based on conventional culture methods has been hampered further by several factors such as：（1） the complexity of microorganisms or derivatives to be investigated;（2） the purpose, techniques, and locations of sampling; and（3） the lack of valid quantitative criteria（e.g., exposure standards and dose/effect relationships）. Although exposure to some microbes is considered to be beneficial for health,more research is needed to properly assess their potential health hazards including inter-individual susceptibility, interactions with non-biological agents, and many proven/unproven health effects（e.g., atopy and atopic diseases）.

关键词： Health effect exposure Infectious diseases Respiratory diseases Cancer Guideline

Nanomaterials for the abatement of cadmium (Ⅱ) ions from water/ wastewater

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Nano Research 2019年第7期12卷 1489-1507页

作者： Kumar Vikrant Vanish Kumar Kowsalya Vellingiri ki-Hyun kim Department of Civil and environmental engineering Hanyang University222 Wangsimni-roSeoul 04763Republic of Korea National Agri-Food Biotechnology Institute (NABI) S.A.S. NagarPunjab 140306India environmental and Water Resources engineering Division Department of Civil Engineering IIT MadrasChennai 600036India

The rapid rise of modern industry is the source of unchecked effluents containing many pernicious heavy metals (e.g.,cadmium).To rehabilitate the ecology,food resources,and health of humans and animals,various conventional methodologies are being used in wastewater treatment facilities for the abatement of ***,the development of advanced,economical,and efficient adsorbents is needed because of the many shortcomings of conventional methods (e.g.,high cost,intensive operation,and inefficiency).Recent advancements in materials science and chemistry have introduced the use of nanomaterials,which possess very high specific surface areas and multiple functionalities,for the removal of specific targets such as *** review explores the recent developments and trends in nanomaterial adsorption technology for the mitigation of *** paper further surveys the present obstacles and future opportunities for the advancement of nanomaterial-based technologies in the area of water treatment.

关键词： nanomaterials cadmium adsorption pollution control water purification heavy metal