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Characteristics of viral specimens collected from asymptomatic and fatal cases of COVID-19

The Journal of Biomedical Research 2020年第6期34卷 431-436页

作者： Andrew J.Gorzalski Paul Hartley chris laverdure Heather Kerwin Richard Tillett Subhash Verma Cyprian Rossetto Sergey Morzunov Stephanie Van Hooser Mark W.Pandori Nevada State Public Health Laboratory RenoNV 89597USA Nevada Genomics Center RenoNV 89557USA Washoe County Health District RenoNV 89512USA Nevada Institute of Personalized Medicine University of Nevada Las VegasLas VegasNV 89154-4022USA Nevada Center for Bioinformatics University of Nevada RenoRenoNV 89557USA Department of Microbiology and Immunology University of NevadaReno School of MedicineRenoNV 89557USA. Department of Pathology and Laboratory Medicine University of NevadaReno School of MedicineRenoNV 89557USA.

We sought to determine the characteristics of viral specimens associated with fatal cases,asymptomatic cases and non-fatal symptomatic cases of *** included the analysis of 1264 specimens found reactive for at least two SARS-CoV-2 specific loci from people screened for infection in Northern Nevada in March-May of *** these,30 were specimens from fatal cases,while 23 were from positive,asymptomatic *** assessed the relative amounts of SARS-CoV-2 RNA from sample swabs by real-time PCR and use of the threshold crossing value(Ct).Moreover,we compared the amount of human RNase P found on the same swabs.A considerably higher viral load was found to be associated with swabs from cases involving fatality and the difference was found to be strongly statistically *** this difference,we sought to assess whether any genetic correlation could be found in association with virus from fatal cases using whole genome *** no common genetic elements were discerned,one branch of epidemiologically linked fatal cases did have two point mutations,which no other of 156 sequenced cases from northern Nevada *** mutations caused amino acid changes in the 3′-5′exonuclease protein,and the product of the gene,orf8.

关键词： COVID-19 SARS-COV-2 real-time PCR Ct value viral load

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