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An Arabidopsis Lipid Flippase Is Required for Timely Recruitment of Defenses to the Host- Pathogen Interface at the Plant Cell Surface

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Molecular Plant 2017年第6期10卷 805-820页

作者： William Underwood andrew ryan Shauna C. Somerville Energy Biosciences Institute Department of Plant and Microbial Biology University of California Berkeley CA 94720 USA USDA-ARS Red River Valley Agricultural Research Center Sunflower and Plant Biology Research Unit Fargo ND 58102-2765 USA Division of Biological Sciences University of California San Diego CA 92161 USA

Deposition of cell wall-reinforcing papillae is an integral component of the plant immune response. TheArabidopsis PENETRATION 3 （PEN3） ATP binding cassette （ABC） transporter plays a role in defense against numerous pathogens and is recruited to sites of pathogen detection where it accumulates within papillae. However, the trafficking pathways and regulatory mechanisms contributing to recruitment of PEN3 and other defenses to the host-pathogen interface are poorly understood. Here, we report a confocal microscopy-based screen to identify mutants with altered localization of PEN3-GFP after inoculation with powdery mildew fungi. We identified a mutant, aberrant localization of PEN3 3 （alp3）, displaying accumulation of the normally plasma membrane （PM）-Iocalized PEN3-GFP in endomembrane compartments. The mutant was found to be disrupted in the P4-ATPase AMINOPHOSPHOLIPID ATPASE 3 （ALA3）, a lipid flippase that plays a critical role in vesicle formation. We provide evidence that PEN3 undergoes continuous endocytic cycling from the PM to the trans-Golgi network （TGN）. In alp3, PEN3 accumulates in the TGN, causing delays in recruitment to the host-pathogen interface. Our results indicate that PEN3 and other defense proteins continuously cycle through the TGN and that timely exit of these proteins from the TGN is critical for effective pre-invasive immune responses against powdery mildews.

关键词： plant-microbe interactions defense responses protein traffic and secretion macromolecular trafficking papilla ABC transporter

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Machine learning-guided accelerated discovery of structure-property correlations in lean magnesium alloys for biomedical applications

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Journal of Magnesium and Alloys 2024年第6期12卷 2267-2283页

作者： Sreenivas Raguraman Maitreyee Sharma Priyadarshini Tram Nguyen ryan McGovern andrew Kim Adam J.Griebel Paulette Clancy Timothy P.Weihs Department of Materials Science and Engineering Johns Hopkins University3400 N Charles StBaltimore21218MDU.S.A Hopkins Extreme Materials Institute Johns Hopkins University3400 N Charles StBaltimore21218MDU.S.A Department of Chemical and Biomolecular Engineering Johns Hopkins University3400 N Charles StBaltimore21218MDU.S.A Translational Tissue Engineering Center Johns Hopkins School of Medicine400 N BroadwayBaltimore21231MDU.S.A Department of Biomedical Engineering Johns Hopkins University3400 N Charles StBaltimore21218MDU.S.A Research and Development Fort Wayne Metals Research ProductsLLC9609 Ardmore AveFort Wayne46809INU.S.A Department of Mechanical Engineering Johns Hopkins University3400 N Charles StBaltimore21218MDU.S.A

Magnesium alloys are emerging as promising alternatives to traditional orthopedic implant materials thanks to their biodegradability,biocompatibility,and impressive mechanical ***,their rapid in-vivo degradation presents challenges,notably in upholding mechanical integrity over *** study investigates the impact of high-temperature thermal processing on the mechanical and degradation attributes of a lean Mg-Zn-Ca-Mn alloy,*** rapid,cost-efficient characterization methods like X-ray diffraction and optical microscopy,we swiftly examine microstructural changes post-thermal *** Pearson correlation coefficient analysis,we unveil the relationship between microstructural properties and critical targets(properties):hardness and corrosion ***,leveraging the least absolute shrinkage and selection operator(LASSO),we pinpoint the dominant microstructural factors among closely correlated *** findings underscore the significant role of grain size refinement in strengthening and the predominance of the ternary Ca_(2)Mg_(6)Zn_(3)phase in corrosion *** suggests that achieving an optimal blend of strength and corrosion resistance is attainable through fine grains and reduced concentration of ternary *** thorough investigation furnishes valuable insights into the intricate interplay of processing,structure,and properties in magnesium alloys,thereby advancing the development of superior biodegradable implant materials.

关键词： Magnesium alloys Machine learning Corrosion Mechanical properties Rapid characterization

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使用Agilent 5100同步垂直双向观测ICP-OES按照US EPA 200.7方法对水中痕量元素进行超快速测定

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环境化学 2015年第3期34卷 593-595页

作者： John Cauduro andrew ryan 安捷伦科技公司

采用Agilent 5100同步垂直双向观测(SVDV)ICP-OES结合SPS 3自动进样器和SVS 2+高效率切换阀系统,遵循EPA 200.7方法针对饮用水中的26种元素进行检测,可获得低至μg·L-1(ppb)的出色方法检测限,回收率在90%—110%之间,12 h的方法长期稳... 详细信息

采用Agilent 5100同步垂直双向观测(SVDV)ICP-OES结合SPS 3自动进样器和SVS 2+高效率切换阀系统,遵循EPA 200.7方法针对饮用水中的26种元素进行检测,可获得低至μg·L-1(ppb)的出色方法检测限,回收率在90%—110%之间,12 h的方法长期稳定性低于1.3%RSD,只需一次运行即可分析所有元素,该仪器的样品测定时间降至58 s,每个样品的氩气消耗量降低了50%.

关键词： Agilent 5100 SVDV ICP-OES EPA 200.7 饮用水 CRM:标准参考物质

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Prioritizing Strategies for Building the Resilience of Public Health Systems to Disasters Across Multiple Communities and Countries

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International Journal of Disaster Risk Science 2024年第1期15卷 1-17页

作者： Benjamin J.ryan Mayumi Kako Shelby Garner Rok Fink Ismail Tayfur Jonathan Abrahams Sanjaya Bhatia Adriana Campelo Matthew Fendt Alicia Fontenot Nahuel Arenas Garcia Tim Hatch Ryoma Kayano LaShonda Malrey‑Horne Makiko MacDermot Md Moshiur Rahman Chaverle Noel Shuhei Nomura Jeremy P.Novak Maria Opazo Kendell Oliver Luciana Peters Sohel Rahman PerihanŞimşek andrew Stricklin Raymond Swienton Bryan W.Brooks Frist College of Medicine Belmont UniversityNashvilleTN 37212USA Department of Environmental Science Environmental Health Science ProgramCollege of Arts and SciencesBaylor UniversityWacoTX 76798USA Division of Nursing Science School of Biomedical and Health SciencesHiroshima UniversityHiroshima 734-8553Japan Gordon E.Inman College of Health Sciences and Nursing Belmont UniversityNashvilleTN 37212USA Faculty of Health Sciences University of Ljubljana1000 LjubljanaSlovenia Department of Emergency Medicine University of Health Sciences34668 IstanbulTurkey Monash University Accident Research Center MelbourneVIC 3800Australia Global Education and Training Institute United Nations Ofce for Disaster Risk ReductionIncheon 22004Republic of Korea Regional Ofce for the Americas and Caribbean United Nations Ofce for Disaster Risk ReductionPanama City 0843-03441Panama Engineering and Computer Science Baylor UniversityWacoTX 76798USA Department of Public Health Robbins College of Health and Human SciencesBaylor UniversityWacoTX 76798USA Alabama Department of Public Health MontgomeryAL 36092USA World Health Organization Centre for Health Development(WHO Kobe Centre) Kobe 651-0073Japan Waco-McLennan County Public Health District WacoTX 76707USA Department of Health Policy and Management School of MedicineKeio UniversityTokyo 160-8582Japan Department of Global Health Policy Graduate School of MedicineThe University of TokyoTokyo 113-0033Japan Tokyo Foundation for Policy Research Tokyo 106-6234Japan Global Development College BrisbaneQLD 4000Australia Municipality of Pudahuel 13124 PudahuelChile City Hall of Porto Alegre Porto Alegre 90010-170Brazil Ministry of Health and Family Welfare Government of the People’s Republic of BangladeshDhaka 1000Bangladesh Department of Emergency Aid and Disaster Management Trabzon University61335 TrabzonTurkey Department of Emergency Medicine UT SouthwesternDallasTX 75390USA

The COVID-19 pandemic highlighted the urgent need to strengthen public health *** response,the United Nations Disaster Risk Reduction(UNDRR) Public Health System Resilience Scorecard(Scorecard) was applied in workshops across multiple *** aim of our research was to explore the workshop findings to develop priority strategies for strengthening public health system *** conducted a workshop from 14 to 16 March 2023,at the UNDRR Global Education and Training Institute in Incheon,Republic of Korea.A sequential modified Delphi method was utilized to develop a set of prioritized resilience *** were drawn from 70 strategies identified from 13 distinct workshops in eight *** two surveys,23 strategies were *** received ratings of "High" or Very High" from89% of *** related to the inclusion of public health risks in emergency plans,integrating multidisciplinary teams into public health,enabling local transport mechanisms,and improving the ability to manage an influx of *** Scorecard provides an adaptable framework to identify and prioritize strategies for strengthening public health system *** leveraging this methodology,our study demonstrated how resilience strategies could inform disaster risk reduction funding,policies,and actions.

关键词： Health system resilience Public policy Resilience scorecard Workshops

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CFD investigation of dense phase pneumatic conveying at a pipeline enlargement

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Particuology 2012年第2期10卷 176-183页

作者： Don McGlinchey andrew Cowell ryan Crowe School of Engineering and Computing Glasgow Caledonian University Glasgow Scotland UK

The practice of stepping a conveying line is not new and there are many examples in industry; however, the details of the flow behaviour at the step have not been extensively studied. Three step geometries were modelled： an ＇abrupt＇ step and two ＇gradual＇ step-up geometries from a pipe bore of 75-100 ram. The flow behaviour of a single plug of material passing through these geometries was investigated using the ＇Eulerian＇ CFD model from Fluent. Solids volume fractions were recorded at 0.01 s time steps at several point locations, and visualised throughout the pipe.

关键词： Pneumatic conveyingStepped pipelinePlug flowCFD

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Regulation ofβ2-adrenoceptors in brain glia:implications for neuroinflammatory and degenerative disorders

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Neural Regeneration Research 2020年第11期15卷 2035-2036页

作者： Karen M.ryan andrew Harkin Trinity College Institute of Neuroscience Trinity College Dublin Neuropsychopharmacology Research Group School of Pharmacy and Pharmaceutical Sciences&Trinity College Institute of NeuroscienceTrinity College DublinDublinIreland

Noradrenaline:Within the central nervous system(CNS),the primary source of the catecholamine neurotransmitter noradrenaline is the locus coeruleus(LC)in the pontine tegmentum,with LC neurons projecting to almost all regions of the brain and spinal *** its release from LC neurons,noradrenaline has wide ranging *** example,noradrenaline is the endogenous agonist for G-coupledα-andβ-adrenoceptors that are expressed on many cell types,including neurons and glia,in both the peripheral nervous system and *** is via these receptors that noradrenaline exerts its anti-inflammatory and neurotrophic effects in the *** additionally has adrenoceptor-independent neuroprotective actions,and as such plays a role in free radical scavenging and reducing oxidative stress(Feinstein et al.,2016).

关键词： adrenoceptor protective endogenous

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A flexible and scalable scheme for mixing computed formation energies from different levels of theory

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npj Computational Materials 2022年第1期8卷 1857-1867页

作者： ryan S.Kingsbury andrew S.Rosen Ayush S.Gupta Jason M.Munro Shyue Ping Ong Anubhav Jain Shyam Dwaraknath Matthew K.Horton Kristin A.Persson Department of Materials Science and Engineering University of California BerkeleyBerkeleyCA94720USA Energy Technologies Area Lawrence Berkeley National LaboratoryBerkeleyCA94720USA Materials Science Division Lawrence Berkeley National LaboratoryBerkeleyCA94720USA Miller Institute for Basic Research in Science University of CaliforniaBerkeleyCA94720USA University of California San Diego La JollaCA92093USA Molecular Foundry Lawrence Berkeley National LaboratoryBerkeleyCA94720USA

Computational materials discovery efforts are enabled by large databases of properties derived from high-throughput density functional theory(DFT),which now contain millions of calculations at the generalized gradient approximation(GGA)level of *** is now feasible to carry out high-throughput calculations using more accurate methods,such as meta-GGA DFT;however recomputing an entire database with a higher-fidelity method would not effectively leverage the enormous investment of computational resources embodied in existing(GGA)***,we propose here a general procedure by which higher-fidelity,low-coverage calculations(e.g.,meta-GGA calculations for selected chemical systems)can be combined with lower-fidelity,high-coverage calculations(e.g.,an existing database of GGA calculations)in a robust and scalable *** then use legacy PBE(+U)GGA calculations and new r2SCAN meta-GGA calculations from the Materials Project database to demonstrate that our scheme improves solid and aqueous phase stability predictions,and discuss practical considerations for its implementation.

关键词： theory scheme theory

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Evolution of sex determination in crustaceans

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Marine Life Science & Technology 2023年第1期5卷 1-11页

作者： Zhiqiang Ye Trent Bishop Yaohai Wang ryan Shahriari Michael Lynch Center for Mechanisms of Evolution Arizona State UniversityTempeAZ 85287USA Institute of Evolution and Marine Biodiversity KLMMEOcean University of ChinaQingdao 266003China

Sex determination(SD)involves mechanisms that determine whether an individual will develop into a male,female,or in rare cases,*** harbor extremely diverse SD systems,including hermaphroditism,environmental sex determination(ESD),genetic sex determination(GSD),and cytoplasmic sex determination(e.g.,Wolbachia controlled SD systems).Such diversity lays the groundwork for researching the evolution of SD in crustaceans,i.e.,transitions among different SD ***,most previous research has focused on understanding the mechanism of SD within a sin-gle lineage or species,overlooking the transition across different SD *** help bridge this gap,we summarize the understanding of SD in various clades of crustaceans,and discuss how different SD systems might evolve from one ***,we review the genetic basis for transitions between different SD systems(i.e.,Dmrt genes)and propose the microcrustacean Daphnia(clade Branchiopoda)as a model to study the transition from ESD to GSD.

关键词： Crustacean Sex determination Sexual differentiation Dmrt Daphnia

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Gridded 20-year climate parameterization of Africa and South America for a stochastic weather generator (CLIGEN)

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Big Earth Data 2023年第2期7卷 349-374页

作者： andrew Fullhart Guillermo E.Ponce-Campos Menberu B.Meles ryan P.McGehee Gerardo Armendariz Paulo Tarso S.Oliveira Cristiano Das Neves Almeida José C.de Araújo Werner Nel David C.Goodrich Southwest Watershed Research Center USDA-ARS TucsonAZUSA School of Natural Resources and the Environment University of ArizonaTucsonAZUSA Sustainable Agricultural Water Systems Unit USDA-ARS DavisCAUSA Agricultural and Biological Engineering Purdue UniversityWest LafayetteINUSA Faculty of Engineering Architecture and Urbanism and GeographyFederal University of Mato Grosso do Sul(UFMS)Campo GrandeMSBrazil Water Resources and Environmental Engineering Laboratory Federal University of ParaíbaJoao PessoaPBBrazil Federal University of Fortaleza Department of Agricultural EngineeringFortalezaBrazil Department of Geography and Environmental Science University of Fort HareAliceSouth Africa

CLIGEN is a stochastic weather generator that creates statistically representative timeseries of daily and sub-daily point-scale weather variables from observed monthly statistics and other parameters. CLIGEN precipitation timeseries are used as climate input for various risk-assessment modelling applications as an alternative to observe long-term, high temporal resolution records. Here, we queried gridded global climate datasets (TerraClimate, ERA5, GPM-IMERG, and GLDAS) to estimate various 20-year climate statistics and obtain complete CLIGEN input parameter sets with coverage of the African and South American continents at 0.25 arc degree resolution. The estimation of CLIGEN precipitation parameters was informed by a ground-based dataset of >10,000 locations worldwide. The ground observations provided target values to fit regression models that downscale CLIGEN precipitation input parameters. Aside from precipitation parameters, CLIGEN’s parameters for temperature, solar radiation, etc. were in most cases directly calculated according to the original global datasets. Cross-validation for estimated precipitation parameters quantified errors that resulted from applying the estimation approach in a predictive fashion. Based on all training data, the RMSE was 2.23 mm for the estimated monthly average single-event accumulation and 4.70 mm/hr for monthly maximum 30-min intensity. This dataset facilitates exploration of hydrological and soil erosional hypotheses across Africa and South America.

关键词： Climate CLIGEN Africa South America

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Recommendations for improved tropical cyclone formation and position probabilistic Forecast products

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Tropical Cyclone Research and Review 2023年第4期12卷 241-258页

作者： Jason P.Dunion Chris Davis Helen Titley Helen Greatrex Munehiko Yamaguchi John Methven Raghavendra Ashrit Zhuo Wang Hui Yu Anne-Claire Fontan Alan Brammer Matthew Kucas Matthew Ford Philippe Papin Fernando Prates Carla Mooney andrew Kruczkiewicz Paromita Chakraborty andrew Burton Mark DeMaria ryan Torn Jonathan L.Vigh CIMAS University of Miamiand Hurricane Research DivisionNOAA/AOMLFloridaUSA NCAR Mesoscale and Microscale Meteorology Laboratory ColoradoUSA UK Met Office ExeterUK Pennsylvania State University PennsylvaniaUSA World Meteorological Organization GenevaSwitzerland University of Reading ReadingUK National Centre for Medium Range Weather Forecasting Ministry of Earth SciencesNoidaIndia University of Illinois at Urbana-Champaign IllinoisUSA Shanghai Typhoon Institute CMAShanghaiChina WMO Tropical Cyclone Programme(TCP)GenevaSwitzerland Cooperative Institute for Research in the Atmosphere/Colorado State University ColoradoUSA Joint Typhoon Warning Center HonoluluUSA MetService New Zealand WellingtonNew Zealand NOAA National Hurricane Center FloridaUSA European Centre for Medium-Range Weather Forecasts ReadingUK Bureau of Meteorology MelbourneAustralia Columbia University New YorkUSA Centre for Climate Research Singapore Meteorological Services SingaporeSingapore CIRA/Colorado State University ColoradoUSA University at Albany-SUNY New YorkUSA Research Applications Laboratory National Center for Atmospheric ResearchColoradoUSA

Prediction of the potentially devastating impact of landfalling tropical cyclones(TCs)relies substantially on numerical prediction *** to the limited predictability of TCs and the need to express forecast confidence and possible scenarios,it is vital to exploit the benefits of dynamic ensemble forecasts in operational TC forecasts and ***,TCWCs,and other forecast centers value probabilistic guidance for TCs,but the International Workshop on Tropical Cyclones(IWTC-9)found that the“pull-through”of probabilistic information to operational warnings using those forecasts is ***-9 recommendations led to the formation of the WMO/WWRP Tropical Cyclone-Probabilistic Forecast Products(TC-PFP)project,which is also endorsed as a WMO Seamless GDPFS Pilot *** main goal of TC-PFP is to coordinate across forecast centers to help identify best practice guidance for probabilistic TC ***-PFP is being implemented in 3 phases:Phase 1(TC formation and position);Phase 2(TC intensity and structure);and Phase 3(TC related rainfall and storm surge).This article provides a summary of Phase 1 and reviews the current state of the science of probabilistic forecasting of TC formation and *** is considerable variability in the nature and interpretation of forecast products based on ensemble information,making it challenging to transfer knowledge of best practices across forecast *** among forecast centers regarding the effectiveness of different approaches would be helpful for conveying best *** collaboration with experts experienced in communicating complex probabilistic TC information and sharing of best practices between centers would help to ensure effective decisions can be made based on TC ***,forecast centers need timely access to ensemble information that has consistent,user-friendly ensemble *** consistency across forecast centers in data accessibility,probabilistic forecast pr

关键词： Tropical cyclone Probabilistic Formation Position

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