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A signal-substrate match in the substrate-borne component of a multimodal courtship display

current Zoology 2010年第3期56卷 370-378页

作者： Damian O.ELIAS andrew c.mason Eileen A.HEBETS Department of Environmental Science Policy and ManagementUniversity of California Integrative Behaviour and Neuroscience Group University of Toronto Scarborough School of Biological Sciences University of Nebraska

The environment can impose strong limitations on the efficacy of signal transmission. In particular, for vibratory communication, the signaling environment is often extremely heterogeneous at small scales. Nevertheless, natural selection is expected to select for signals well-suited for effective transmission. Here, we test for substrate-dependent signal efficacy in the wolf spider Schizocosa stridulans Strattou 1991. We first explore the transmission characteristics of this important signaling mo- dality by playing recorded substrate-bome signals through three different substrates （leaf litter, pine litter, and red clay） and measuring the propagated signal. We found that the substrate-bome signal of S. stridulans attenuates the least on leaf litter, the substrate upon which the species is naturally found. Next, by assessing mating success with artificially muted and non-muted males across different signaling substrates （leaf litter, pine litter, and sand）, we explored the relationship between substrate-bome signaling and signaling substrate for mating success. We found that muted males were unsuccessful in obtaining copulations re- gardless of substrate, while mating success was dependent on the signaling substrate for non-muted males. For non-muted males, more males copulated on leaf litter than any other substrate. Taken together, these results confLrm the importance of sub- strate-bome signaling in S. stridulans and suggest a match between signal properties and signal efficacy - leaf litter transmits the signal most effectively and males are most successful in obtaining copulations on leaf litter [current Zoology 56 （3）： 370-378, 2010].

关键词： Environmental heterogeneity Sensory drive Mate choice communication

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The occurrence,inheritance,and segregation of complex genomic structural variation in synthetic Brassica napus

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The crop Journal 2024年第2期12卷 515-528页

作者： Dandan Hu Jin Lu Wenwen Li Yinghui Yang Junxiong Xu Han Qin Hao Wang Yan Niu Huaiqi Zhang Qingqing Liu Xiangxiang He Annaliese S.mason Jchris Pires Zhiyong Xiong Jun Zou National Key Laboratory of crop Genetic Improvement College of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan 430070HubeiChina college of Agronomy Henan Agricultural UniversityZhengzhou 450002HenanChina Key Laboratory of Herbage and Endemic crop Biotechnology Inner Mongolia UniversityHohhot 010070Inner MongoliaChina Plant Breeding Department University of BonnBonn 53115Germany Department of Soil and crop Sciences Colorado State UniversityFort CollinsCO 80523USA

"Synthetic"allopolyploids recreated by interspecific hybridization play an important role in providing novel genomic variation for crop *** synthetic allopolyploids often undergo rapid genomic structural variation(SV).However,how such SV arises,is inherited and fixed,and how it affects important traits,has rarely been comprehensively and quantitively studied in advanced generation synthetic lines.A better understanding of these processes will aid breeders in knowing how to best utilize synthetic allopolyploids in breeding ***,we analyzed three genetic mapping populations(735 DH lines)derived from crosses between advanced synthetic and conventional Brassica napus(rapeseed)lines,using whole-genome sequencing to determine genome *** observed high tolerance of large structural variants,particularly toward the telomeres,and preferential selection for balanced homoeologous exchanges(duplication/deletion events between the A and c genomes resulting in retention of gene/chromosome dosage between homoeologous chromosome pairs),including stable events involving whole chromosomes("pseudoeuploidy").Given the experimental design(all three populations shared a common parent),we were able to observe that parental SV was regularly inherited,showed genetic hitchhiking effects on segregation,and was one of the major factors inducing adjacent novel and larger ***,novel SV occurred at low frequencies with no significant impacts on observed fertility and yield-related traits in the advanced generation synthetic ***,incorporating genome-wide SV in linkage mapping explained significantly more genetic variance for *** results provide a framework for detecting and understanding the occurrence and inheritance of genomic SV in breeding programs,and support the use of synthetic parents as an important source of novel trait variation.

关键词： Allopolyploid Large Genome structural variation Linkage mapping Synthetic polyploids Inheritance and segregation

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Genome and clonal hematopoiesis stability contrasts with immune,cfDNA,mitochondrial,and telomere length changes during short duration spaceflight

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Precision clinical Medicine 2024年第1期7卷 1-13页

作者： J.Sebastian Garcia-Medina Karolina Sienkiewicz S.Anand Narayanan Eliah G.Overbey Kirill Grigorev Krista A.Ryon Marissa Burke Jacqueline Proszynski Braden Tierney caleb M.Schmidt Nuria Mencia-Trinchant Remi Klotz Veronica Ortiz Jonathan Foox christopher chin Deena Najjar Irina Matei Irenaeus chan carlos cruchaga Ashley Kleinman JangKeun Kim Alexander Lucaci conor Loy Omary Mzava Iwijn De Vlaminck Anvita Singaraju Lynn E.Taylor Julian c.Schmidt Michael A.Schmidt Kelly Blease Juan Moreno andrew Boddicker Junhua Zhao Bryan Lajoie andrew Altomare Semyon Kruglyak Shawn Levy Min Yu Duane c.Hassane Susan M.Bailey Kelly Bolton Jaime Mateus christopher E.mason Department of Physiology and Biophysics Weill Cornell MedicineCornell UniversityNew YorkNY 10021USA The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for computational Biomedicine Weill Cornell MedicineNew YorkNY 10021USA Department of Immunology Weill Cornell MedicineCornell UniversityNew YorkNY 10021USA Department of Stem cell Biology and Regenerative Medicine Keck School of MedicineUniversity of Southern CaliforniaLos AngelesCA 90033USA Space Exploration Technologies corporation HawthomeCA 90250USA Sovaris Aerospace BoulderCO 80302USA Advanced Pattern Analysis&Human Performance Group BoulderCO 80302USA children's cancer and Blood Foundation Laboratories Departments of Pediatrics and Cell and Developmental BiologyDrukier Institute for Children's HealthMeyer Cancer CenterWeill Cornell MedicineNew YorkNY 10021USA Meyer cancer center Weill Cornell MedicineNew YorkNY 10065USA Department of Nutrition and Integrative Physiology Florida State UniversityTallahasseeFL 32306USA Department of Systems Engineering Colorado State UniversityFort CollinsCO 80523USA Element Biosciences San DiegoCA 10055USA Department of Environmental and Radiological Health Sciences Colorado State UniversityFort CollinsCO 80523USA cell and Molecular Biology Program Colorado State UniversityFort CollinsCO 80523USA BioAstra Inc New YorkNYUSA Washington University St Louis Oncology Division St.LouisMO 63100USA Meinig School of Biomedical Engineering Cornell UniversityIthacaNY 14853USA The Feil Family Brain and Mind Research Institute Weill Cornell MedicineNY 10021USA WorldQuant Initiative for Quantitative Prediction Weill Cornell MedicineNew YorkNY 10021USA

Background The Inspiration4(I4)mission,the first all-civilian orbital flight mission,investigated the physiological effects of short-duration spaceflight through a multi-omic *** advances,there remains much to learn about human adaptation to spaceflight's unique challenges,including microgravity,immune system perturbations,and radiation *** To provide a detailed genetics analysis of the mission,we collected dried blood spots pre-,during,and post-flight for DNA *** length was measured by quantitative PcR,while whole genome and cfDNA sequencing provided insight into genomic stability and immune adaptations.A robust bioinformatic pipeline was used for data analysis,including variant calling to assess mutational *** Telomere elongation occurred during spaceflight and shortened after return to ***-free DNA analysis revealed increased immune cell signatures *** significant clonal hematopoiesis of indeterminate potential(cHIP)or whole-genome instability was *** long-term gene expression changes across immune cells suggested cellular adaptations to the space environment persisting months *** Our findings provide valuable insights into the physiological consequences of short-duration spaceflight,with telomere dynamics and immune cell gene expression adapting to spaceflight and persisting after return to *** sequencing data will serve as a reference point for studying the early development of cHIP in astronauts,an understudied phenomenon as previous studies have focused on career *** study will serve as a reference point for future commercial and non-commercial spaceflight,low Earth orbit(LEO)missions,and deep-space exploration.

关键词： genomes clonal hematopoiesis stability immune mitochondria ribosomes spaceflight

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Takayasu's arteritis following crohn's disease in a young woman:Any evidence for a common pathogenesis?

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World Journal of Gastroenterology 2008年第25期14卷 4087-4090页

作者： Melissa AL Farrant Justin c.mason Newton AcS Wong Robert J Longman Department of Surgery Bristol Royal Infirmary Marlborough Street Rheumatology Unit Imperial College London Hammersmith Hospital Department of Histopathology Bristol Royal Infirmary Marlborough Street colorectal Unit Bristol Royal Infi rmary Marlborough Street

Takayasu's arteritis and crohn's disease are chronic in-flammatory diseases of uncertain aetiology. They rarely occur together, with only twenty nine cases of co-ex-istent Takayasu's arteritis and crohn's disease reported in the literature. In 88% of these cases, Takayasu's arteritis was diagnosed simultaneously or following a diagnosis of crohn's disease. We present a case of a young caucasian medical student, incidentally found to have bilateral carotid bruits on auscultation by a colleague. Magnetic resonance angiography revealed stenoses of the common carotid arteries with estab-lished collaterals, and a diagnosis of Type 1 Takayasu's arteritis was made. An 18F-fluorodeoxyglucose positron emission tomography scan revealed no active disease. Nine months later, she presented with a short history of abdominal pain, vomiting and abdominal disten-sion. Barium follow-through and computer tomography revealed a terminal ileal stricture and proximal small bowel dilation. An extended right hemicoloectomy was performed and histopathology supported a diagnosis of crohn's disease. This case report is presented with a particular focus on the temporal relationship between these two disease processes and explores whether their concurrence is more than just co-incidence.

关键词： crohn's disease Granuloma Takayasu'sarteritis

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Fertility,genome stability,and homozygosity in a diverse set of resynthesized rapeseed lines

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The crop Journal 2023年第2期11卷 468-477页

作者： Elizabeth Ihien Katche Antje Schierholt Heiko c.Becker Jacqueline Batley Annaliese S.mason Plant Breeding Department The University of Bonn53115 BonnGermany Department of Plant Breeding Justus Liebig University35392 GiessenGermany Department of crop Sciences Division of Plant Breeding MethodologyGeorg-August University Göttingen37073 GöttingenGermany School of Biological Sciences The University of Western AustraliaPerthWA 6009Australia

Rapeseed(Brassica napus,AAcc)was formed by hybridization between progenitor species Brassica rapa(AA)and Brassica oleracea(cc).As a result of a limited number of hybridization events between specific progenitor genotypes and strong breeding selection for oil quality traits,rapeseed has limited genetic *** production of resynthesized *** lines via interspecific hybridization of the diploid progenitor species *** and *** is one possible way to increase genetic variation in ***,most resynthesized lines produced so far have been reported to be meiotically unstable and infertile,in contrast to established *** *** hinders both maintenance and use of this germplasm in breeding *** characterized a large set of 140 resynthesized lines produced by crosses between *** and ***,as well as between *** and wild c genome species(***,***,***,***,*** and ***)for purity(homozygosity),fertility,and genome ***-pollinated seed set,seeds per ten pods as well as percentage pollen viability were used to estimate *** genotyping was performed using the Illumina Infinium Brassica 60K array for 116 genotypes,with at least three individuals per *** of the material which had been advanced through multiple generations was no longer pure,with heterozygosity detected corresponding to unknown parental contributions via *** and genome stability were both *** lines had high numbers of copy number variants(cNVs),indicative of meiotic instability,and high numbers of cNVs were significantly associated with reduced *** putatively stable resynthesized *** lines were *** investigation of these lines may reveal the mechanisms underlying this *** results suggest that selection of stable resynthesized lines for breeding purposes is possible.

关键词： Fertility Genome stability copy number variants SNP genotyping Resynthesized lines

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The influence of stocking levels,clone,fertilization,and weed control on surface cO_(2)efflux in a mid-rotation Pinus radiata *** plantation in canterbury,New Zealand

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Journal of Forestry Research 2021年第6期32卷 2567-2575页

作者： Mohan Kc Euan G.mason Horacio E.Bown School of Forestry University of CanterburyPrivate Bag 4800ChristchurchNew Zealand Ministry of Industry TourismForests and EnvironmentHetaudaBagmati ProvinceNepal Faculty of Forestry University of ChileP.O.Box 9206SantiagoChile

Silvicultural practices applied in managed forest plantations may help counteract the effects of climate change by influencing soil surface cO_(2)efflux(Fs).Understanding the effects of silvicultural practices on Fs will provide unbiased estimates of carbon fluxes and allow better silvicultural decisions for carbon ***,we assessed how Fs differed seasonally across silvicultural practices(i.e.,stocking levels,clone,fertilization and weed control treatments)and evaluated the effects of soil temperature(Ts)and soil volumetric water content(θv)on Fs across these practices for a mid-rotation(14 year-old)Pinus radiata plantation in the canterbury region of New *** were significant differences in Fs(pcking,and five *** effects of fertilization and weed control applied 12 years previously on Fs were *** estimate of Fs(mean±1 standard deviation)from the study site was 22.7±7.1 t ha^(-1)a^(-1)in the form of cO_(2)(6.2±2.1 t ha^(-1)a^(-1)in the form of c).Fs values were consistently higher in plots with 1250 stems ha^(-1)compared to 2500 stems ha^(-1),which may be related to a strong soil resource limitation because of the close spacing in the latter *** differences in Fs across clones suggest that variations in carbon partitioning might explain their growth *** treatments influenced Fs response to soil temperature(pce in *** findings provide insights into how silvicultural management decisions may impact Fs in mid-rotation radiata pine plantations,contributing towards developing more precise and unbiased plantation carbon budgets.

关键词： clone Silvicultural practices Soil cO_(2)efflux Stocking Weed control

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combination antiretroviral studies for patients with primary biliary cirrhosis

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World Journal of Gastroenterology 2016年第1期22卷 349-360页

作者： Ellina Lytvyak Aldo J Montano-Loza andrew L mason Division of Gastroenterology and Hepatology University of Alberta

Following the characterization of a human betaretrovirus in patients with primary biliary cirrhosis(PBc),pilot studies using antiretroviral therapy have been conducted as proof of principal to establish a link of virus with disease and with the eventual aim to find better adjunct therapies for patients unresponsive to ursodeoxycholic *** the first open label pilot study,the reverse transcriptase inhibitor lamivudine had little demonstrable biochemical or histological effect after 1 ***,lamivudine in combination with zidovudine was associated with a significant reduction in alkaline phosphatase as well as improvement in necroinflammatory score,cholangitis and ductopenia over a 12 mo period.A double blind,multi-center randomized controlled trial using lamivudine with zidovudine for 6 mo confirmed a significant reduction in alkaline phosphatase,ALT and AST in patients on antiviral ***,none of the patients achieved the stringent endpoint criteria for normalization of alkaline ***,some patients developed biochemical rebound consistent with drug resistance.A major fault of these studies has been the inability to measure the viral load in peripheral blood and therefore,provide a direct correlation between improvement of hepatic biochemistry and reduction in viral ***,viral mutants to lamivudine with zidovudine were later characterized in the NOD.c3c4 mouse model of PBc that has been used to test other antiretroviral regimens to *** combination of tenofovir and emtricitabine reverse transcriptase inhibitors and the HIV protease inhibitor,lopinavir were found to abrogate cholangitis in the NOD.c3c4 mouse model and the same regimen normalized the liver tests in a PBc patient with HIV and human betaretrovirus *** combination antiretroviral therapy has now been used in a double blind randomized controlled crossover study for patients with PBc followed by an open label extension *** a thi

关键词： Primary biliary cirrhosis Antiretroviraltherapy Human betaretrovirus Randomized controlledtrial Endpoints for trials

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OPTIMIZATION OF A WAVE cANcELLATION MULTIHULL SHIP USING cFD TOOLS

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Journal of Hydrodynamics 2002年第1期14卷 1-7页

作者： c. Yang, R. L■hner, O. Soto (School of computational Sciences, George mason University Fairfax VA 22030-4444, USA) Sch. of comp. Sci. George Mason Univ. Fairfax VA 22030-4444 United States

A simple cFD tool, coupled to a discrete surface representation and a gradient based optimization procedure, is applied to the design of optimal hull forms and optimal arrangement of hulls for a wave cancellation multihull ship. The cFD tool, which is used to estimate the wave drag, is based on the zeroth order slender ship approximation. The hu ll surface is represented by a triangulation, and almost every grid point on the surface can be used as a design variable. A smooth surface is obtained via a si mplified pseudo shell problem. The optimal design process consists of two steps . The optimal center and outer hull forms are determined independently in the fi rst step, where each hull forms are determined independently in the first step, where each hull keeps the same displacement as the original design while the wav e drag is minimized. The optimal outer hull arrangement is determined in the se cond step for the optimal center and outer hull forms obtained in the first step . Results indicate that the new design can achieve a large wave drag reduction i n comparison to the original design configuration.

关键词： hull form design hull form optimiza tion wave cancellation multihull ship trimaran wave resistance cFD tools sl ender ship approximation surface parameterization.

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clinical classification of symptomatic heterotopic pancreas of the stomach and duodenum:A case series and systematic literature review

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World Journal of Gastroenterology 2022年第14期28卷 1455-1478页

作者： Michael T Le compte Brandon mason Keenan J Robbins Motoyo Yano Deyali chatterjee Ryan c Fields Steven M Strasberg William G Hawkins Department of Surgical Oncology University of North CarolinaRaleighNC 27608United States Department of Radiology Stillwater Medical CenterStillwaterOK 74074United States Department of General Surgery Washington University St.LouisSt.LouisMO 63110-8109United States Department of Radiology Mayo ClinicPhoenixAZ 8505United States Department of Pathology and Immunology MD Anderson Cancer CenterHoustonTX 77030United States Department of Surgical Oncology Washington University School of MedicineSt.LouisMO 63110-8109United States Section of Hepatobiliary-Pancreatic and GI Surgery Washington University St.LouisSt.LouisMO 63110United States

BAcKGROUND Heterotopic pancreas(HP)is an aberrant anatomic malformation that occurs most commonly in the upper gastrointestinal *** the majority of heterotopic pancreatic lesions are asymptomatic,many manifest severe clinical symptoms which require surgical or endoscopic *** of the clinical manifestations and symptoms of HP is limited due to the lack of large volume studies in the *** purpose of this study is to review symptomatic cases at a single center and compare these to a systematic review of the literature in order to characterize common clinical manifestations and treatment of this *** To classify the common clinical manifestations of heterotopic *** A retrospective review was conducted of pathologic samples containing heterotopic pancreas from *** was limited to HP of the upper gastrointestinal tract due to the frequency of presentation in this *** patients were identified from review of the medical records and clinical symptoms were *** were compared to a systematic review of the literature utilizing Pub Med and Embase searches for papers pertaining to heterotopic *** describing symptomatic presentation of HP were selected for *** including demographics,symptoms,presentation and treatment were compiled and *** Twenty-nine patient were identified with HP at a single center,with six of these identified has having clinical *** manifestations included,gastrointestinal bleeding,gastric ulceration with/without perforation,pancreatitis,and gastric outlet *** review of the literature yielded 232 publications detailing symptomatic cases with only 20 studies describing ten or more *** and multi-patient studies were combined to form a cohort of 934 symptomatic *** majority of patients presented with abdominal pain(67%)combined with one of the following clinical catego

关键词： Heterotopic pancreas Ectopic pancreas Aberrant pancreas Pancreatic rest Groove pancreatitis

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Biodegradable stent or balloon dilatation for benign oesophageal stricture: Pilot randomised controlled trial

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World Journal of Gastroenterology 2014年第48期20卷 18199-18206页

作者： Anjan Dhar Helen close Yirupaiahgari K Viswanath colin J Rees Helen c Hancock A Deepak Dwarakanath Rebecca H Maier Douglas Wilson James M mason Department of Gastroenterology County Durhamand Darlington NHS Foundation Trust Co. Durham DL14 6ADUnited Kingdom Durham clinical Trials Unit School of Medicine Pharmacy and Health Durham University Queen’s Campus Wolfson Research Institute University Boulevard Stockton-on-Tees TS17 6BH United Kingdom Department of Surgery James Cook University Hospital Marton Road Middlesbrough TS4 3BW United Kingdom Department of Gastroenterology South Tyneside Hospitals NHS Foundation Trust Harton Lane South Shields NE34 0PL United Kingdom Department of Gastroenterology University Hospitals of North Tees Hardwick Stockton on Tees TS19 8PE United Kingdom

AIM: To undertake a randomised pilot study comparing biodegradable stents and endoscopic dilatation in patients with strictures.

关键词： Benign oesophageal stricture Biodegradable stent Endoscopic balloon dilatation Pilot study Randomised controlled trial Dysphagia

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