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Toll-like receptor 9 polymorphisms and Helicobacter pylori influence gene expression and risk of gastric carcinogenesis in the Brazilian population

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World Journal of Gastrointestinal Oncology 2019年第11期11卷 998-1010页

作者： Manoela Dias Susi de Matos Lourenco Caroline Lucas Trevizani Rasmussen Spencer Luis Marques Payao ana Flavia Teixeira Rossi ana Elizabete Silva Juliana Garcia de oliveira-Cucolo department of Graduate-Level Research USCSacred Heart UniversityBauru 17011-970SPBrazil department of Genetics and Molecular Biology FAMEMA-Marilia Medical SchoolMarília 17519-030SPBrazil department of Biology Sao Paulo State University-UNESPSao Jose do Rio Preto 15054-000SPBrazil department of Molecular Biological and Genetics and Molecular Biology Research Unit-UPGEMFaculty of Medicine of Sao Jose do Rio Preto-FAMERPSao Jose do Rio Preto 15090-000SPBrazil

BACKGROUND Toll-like receptors(TLRs)are the first line of host defense,and are involved in Helicobacter pylori(***)recognition and activation of both inflammatory and carcinogenic *** presence of single nucleotide polymorphisms(SNPs)in genes that activate the immune response may modulate the risk of precancerous lesions and gastric cancer(GC).Among them,Toll-like receptor 9(TLR9)polymorphisms have emerged with a risk factor of infectious diseases and cancer,however the studies are still *** To evaluate whether TLR9 rs5743836 and rs187084 SNPs contribute to the risk of gastric carcinogenesis,and its influence on mRNA *** A case-control study was conducted to evaluate two TLR9 SNPs(TLR9-1237 TCrs5743836 and TLR9-1486 CT-rs187084)in chronic gastritis(CG)and GC patients.A total of 609 DNA samples of peripheral blood[248 CG,161 GC,and 200 samples from healthy individuals(C)]were genotyped by polymerase chain reaction-restriction fragment length *** samples were tested for the *** infection using Hpx1 and Hpx2 *** polymerase chain reaction by TaqMan?assay was used to quantify TLR9 mRNA from fresh gastric tissues(48 GC,26 CG,and 14 C).RESULTS For TLR9-1237,the TC+CC or CC genotypes were associated with a higher risk of GC than C[recessive model odds ratio(OR)=5.01,95%confidence interval(CI):2.52-9.94,Pdel OR=4.63;95%CI:2.44-8.79,Pdel OR=2.72,95%CI:1.57-4.72,Pdel OR=1.79,95%CI:1.15-2.79,P=0.0094)was observed when compared to the C ***,the presence of TLR9-1237 TC/CC+TLR9-1486 CC genotypes potentiate the risk for this neoplasm(OR=18.57;95%CI:5.06-68.15,P<0.0001).The TLR9 mRNA level was significantly higher in the GC group(RQ=9.24,P<0.0001)in relation to the CG group(RQ=1.55,P=0.0010)and normal mucosa(RQ=1.0).When the sa

关键词： Toll-like receptor 9 Helicobacter pylori Gastric cancer Chronic gastritis Polymorphisms Gene expression

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Conocarpus erectus L., a plant with a high content of structural sugars, ions and phenolic compounds, shows antioxidant and antimicrobial properties promoted by different organic fractions

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Asian Pacific Journal of Tropical Biomedicine 2018年第9期8卷 463-470页

作者： Dayane Kelly Dias do Nascimento Santos Weslley Henrique de oliveira Melo anastassia Mariáh Nunes de oliveira Lima Iranildo Joseda Cruz Filho Glaucia Manoella de Souza Lima Tulio Diego da Silva Maiara Celine de Moura Marcia Silva do Nascimento ana maria Souto Maior Thiago Henrique Napoleao Cristiane Moutinho Lagos de Melo department of Biochemistry Biosciences Centre Federal University of Pernambuco department of Antibiotics Biosciences Centre Federal University of Pernambuco Center of Strategic Technologies of the Northeast

Objective: To evaluate the structural and chemical composition of plant and the antioxidant and antimicrobial activities promoted by hexanic, ethanolic and ethyl acetate fractions obtained from leaves of Conocarpus ***: Organic fractions were characterized through UPLC-MS and *** potential was performed through DPPH and molybdenum phosphate *** and antifungal assays were performed in accordance with Clinical and Laboratory Standards Institute ***: The obtained biomass of Conocarpus erectus leaves showed the high presence of glucose(0.45 g/L), cellulose(28.69%), Na(55.126 μg/L) and K(31.163 μg/L).We identified seven compounds in the hexanic and ethyl acetate fractions, and eight compounds in ethanolic ***, phenolic compounds are prevalent in all organic fractions with values of(10.04 ± 0.24),(221.26 ± 1.84),(340.53 ± 0.84) mg/g GAE to hexanic, ethyl acetate and ethanolic fraction, *** results showed a high potential in ethyl acetate fraction(71.82 ± 6.87)% and(10.89 ± 0.05)% in DPPH and molybdenum phosphate techniques, *** ethanolic fraction showed moderate bacteriostatic and bactericidal activity against Staphylococcus aureus and presented a high fungistatic potential for all Candida species ***: Organic fractions obtained from leaves of Conocarpus erectus present antimicrobial and antioxidant properties, and these findings contribute to scientific information for the effectiveness on use of this plant in the development of a phytotherapic compound.

关键词： Combretaceae Phenolic compounds Antimicrobial activity Antioxidant

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Selection of Bacillus thuringiensis strains in citrus and their pathogenicity to Diaphorina citri (Hemiptera: Liviidae) nymphs

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Insect Science 2020年第3期27卷 519-530页

作者： Silvia de oliveira Dorta Juliana Balbinotte Rose Monnerat Joao Roberto Spotti Lopes Tatiane da Cunha Odimar Zanuzo Zanardi Marcelo Pedreira de miranda Marcos Antonio Machado Juliana de Freitas-Astua Programs de Pos-Graduagao em Microbiologia Agricola Escola Superior de Agricultura Luiz de QueirozUniversidade de Sao PauloPiracicabaSPBrazil Laboratorio de Biotecnologia Centro de Citricultura Sylvio MoreiraInstituto Agronomico de CampinasCordeiropolisSPBrazil Laboratorio de Insetos Vetores de Fitopatdgenos Departamento de Entomologia e AcarologiaEscola Superior de Agricultura Luiz de QueirozUniversidade de Sao PauloPiracicabaSPBrazil Embrapa Recursos Geneticos e Biotecnologia BrasiliaDFBrazil Fundo de defesa da Citricultura(Fundecitrus) AraraquaraSPBrazil Embrapa Mandioca e Fruticultura Cruz das AlmasBABrazil Laboratdrio de Bioquimica Fitopatoldgica Instituto BioldgicoSao PauloSPBrazil

Bacillus thuringiensis(Bt)toxins are effective in controlling insect pests either through the spraying of products or when expressed in transgenic *** discovery of endophytic Bt strains opened new perspectives for studies aimed at the control of sap‐sucking insects,such as the Asian citrus psyllid Diaphorina citri Kuwayama(Hemiptera:Liviidae),a vector of“Candidatus Liberibacter spp.,”associated with citrus huanglongbing(HLB).In this study,translocation of endophytic Bt strains in citrus seedlings inoculated with Bt suspension delivered by soil‐drench,and their systemic pathogenicity to *** nymphs were *** pathogenicity of three wild‐type Bt strains against *** third‐instar nymphs was *** the 10 recombinant strains tested(each of them harboring a single cry or cyt gene),3 can be highlighted,causing 42%–77%and 66%–90%nymphal mortality at 2 and 5 d after inoculation,*** isolation of Bt cells from young citrus shoots and dead nymphs,and PCR performed with specific primers,confirmed the involvement of the Bt strains in the psyllid *** is the first report showing the translocation of Bt strains from citrus seedling roots to shoots and their potential to control *** nymphs that fed on these soil‐drench inoculated *** Bt strains that caused the highest mortality rates have the potential to be used as bioinsecticides to control *** and the identified genes can be used for the production of transgenic Bt citrus.

关键词： Asian citrus psyllid Citrus sinensis Cry toxins endophytic Bt huanglongbing young shoots

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designing Artemisinins with Antimalarial Potential, Combining Molecular Electrostatic Potential, Ligand-Heme Interaction and Multivariate Models

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Computational Chemistry 2023年第1期11卷 1-23页

作者： Josué de Jesus oliveira Araújo Ricardo Morais de miranda Jeferson Stiver oliveira de Castro Antonio Florêncio de Figueiredo ana Cecília Barbosa Pinheiro Sílvia Simone dos Santos Morais Marcos Antonio Barros dos Santos Andréia de Lourdes Ribeiro Pinheiro Andréia de Lourdes Ribeiro Pinheiro Fábio dos Santos Gil Heriberto Rodrigues Bitencourt Gustavo Nery Ramos Alves José Ciríaco Pinheiro Laboratório de Química Teórica e Computacional Universidade Federal do Pará Belém PA Brasil Instituto Federal de Educaç &atilde o Ciência e Tecnologia do Pará Belém PA Brasil Universidade do Estado do Amapá Macapá AP Brasil Fundaç &atilde o Santa Casa de Misericórdia do Pará Belém PA Brasil Universidade do Estado do Pará Barcarena PA Brasil departamento de Biologia Universidade do Estado do Maranh&atilde o S&atilde o Luís MA Brasil Laboratório de Síntese Organica Universidade Federal do Pará Belém PA Brasil

Artemisinins tested against W-2 strains of malaria falciparum are investigated with molecular electrostatic potential (MEP), in an attempt to identify key features of the compounds that are necessary for their activities, as well as to investigate likely interactions with the receptor in a biological process and to use that information to propose new molecules. In order to discover the best geometry involving the ligand-receptor complexes (heme) studied and help in the proposition of the new derivatives, molecular simulations of interactions between the most negative charged region around the peroxide and heme locates (the ones around the Fe2+ ion) were carried out. In addition, PCA (principal components analysis), HCA (hierarchical cluster analysis), SDA (stepwise discriminant analysis), and KNN (K-nearest neighbor) multivariate models were employed to investigate which descriptors are responsible for the classification between the higher and lower antimalarial activity of the compounds, and also this information was used to propose new potentially active molecules. The information accumulated in studies of MEP, molecular docking, and multivariate analysis supported the proposal of new structures with potential antimalarial activities. The multivariate models constructed were applied to the new structures and indicated numbers 19 and 20 as the most prominent for syntheses and biological assays.

关键词： Artemisinins Antimalarial Potential Molecular Electrostatic Potential Ligand-Heme Interaction Multivariate Models

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Serum levels of angiotensin converting enzyme as a biomarker of liver fibrosis

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World Journal of Gastroenterology 2017年第48期23卷 8439-8442页

作者： Aline Silva miranda ana Cristina Sim?es e Silva In-terdisciplinary Laboratory of Medical Investigation Faculty of MedicineFederal University of Minas Gerais Laboratory of Neurobiology Department of MorphologyInstitute of Biological SciencesFederal University of Minas Gerais department of Pediatrics Faculty of MedicineFederal University of Minas Gerais

The renin angiotensin system(RAS) is classically conceived as a circulating hormonal system involved in blood pressure control and hydroelectrolyte balance. The discovery that RAS components are locally expressed in a wide range of organs and tissues,including the liver,pointed to a role for this system in the pathogenesis of several conditions including hepatic fibrosis and cirrhosis. It has been widely reported that the classical RAS axis composed by the angiotensin converting enzyme(ACE)-angiotensin(Ang) Ⅱ-Ang type 1(AT1) receptor mediates pro-inflammatory,pro-thrombotic,and pro-fibrotic processes. On the other hand,the alternative axis comprising ACE2-Ang-(1-7)-Mas receptor seems to play a protective role by frequently opposing Ang Ⅱ action. Chronic hepatitis B(CHB) is one of the leading causes of liver fibrosis,accounting for the death of nearly one million people worldwide. Liver fibrosis is a key factor to determine therapeutic interventions for patients with CHB. However,the establishment of non-invasive and accurate methods to detect reversible stages of liver fibrosis is still a challenge. In an elegant study published in the 36 th issue of the World Journal of Gastroenterology,Noguchi et al showed the predictive value of serum ACE levels in detecting not only advanced stages of liver fibrosis but also initial and intermediate fibrotic stages. The serum levels of ACE might represent an accurate,non-invasive,widely available,and easy method to evaluate fibrosis related to CHB. Moreover,therapies involving the inhibition of the classical RAS axis components might be promising in the control of CHB-related liver fibrosis.

关键词： Renin angiotensin system Angiotensin converting enzyme Angiotensin Ⅱ Angiotensin-(1-7) Chronic hepatitis B hepatic cirrhosis Liver fibrosis

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What Do Seedlings Like? The Relationship between Seedling Richness and Abundance with Abiotic Factors

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Agricultural Sciences 2023年第6期14卷 767-774页

作者： Johnatan Jair de Paula Marchiori Vinicius de Souza oliveira Eduarda Carriço ana Clara Bayer Bernabé Anderson Mathias Holtz Ronilda Lana Aguiar ana Beatriz Mamedes Piffer Gilcéa Teixeira Fontana Boone Ricardo Amaro de Sales Lusiane de Sousa Ferreira department of Environmental Sciences/Phytotechnics department Federal University Rural of Rio de Janeiro-Seropédica Rio de Janeiro Brazil Center for Agricultural Sciences and Engineering Federal University of Espírito Santo Alegre Espírito Santo Brazil Laboratory of Entomology and Acarology Federal Institute of Espírito Santo Campus Itapina Colatina Espírito Santo Brazil Agriculture department State University Paulista “Júlio de Mesquita Filho” Botucatu S&#227o Paulo Brazil

Natural regeneration is the interaction of natural processes to restore the forest ecosystem. Its dynamics are influenced by the intensity and extent of a series of abiotic and biotic factors, which may be intrinsic or extrinsic. Knowing the importance of establishing natural regeneration within forest ecosystems, this work aimed to evaluate whether litter depth and trail distance influenced seedling abundance and richness in a forest fragment undergoing natural restoration. The hypothesis tested in this research was that abiotic factors influence the natural regeneration of this forest since they are factors that are directly linked to seed germination and seedling establishment. 30 plots of 1 m2 were randomly analyzed within the forest located on the brown trail. A millimeter ruler was used to diagnose the litter depth and a measuring tape to measure the distance from the plot to the edge. In each plot the seedlings were morpho-specified and each morphospecies had the number of individuals counted. Linear regression tests were performed to assess the relationships between species richness and trail distance and litter depth. The same was done for species abundance. All results showed that there is no relationship pattern between any of the variables. Other factors also influence the regeneration of a forest, such as luminosity and seed bank. Furthermore, litter depth is related to the successional stage of the forest. It was concluded that the abiotic factors tested do not influence the regeneration of the study area.

关键词： Abiotic Factors Natural Regeneration Forest Ecosystem

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Clinical and pathological characterization of epstein-barr virus-associated gastric carcinomas in portugal

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World Journal of Gastroenterology 2017年第40期23卷 7292-7302页

作者： Joana Ribeiro Andreia oliveira mariana Malta Claudia oliveira Fernanda Silva ana Galaghar Luís Pedro Afonso maria Cassiano Neves Rui Medeiros Pedro Pimentel-Nunes Hugo Sousa Molecular Oncology and Viral Pathology Group Portuguese Oncology Institute of Porto Faculty of Medicine of Porto University department of Pathology Portuguese Oncology Institute of Porto Medical Oncology department Portuguese Oncology Institute of Porto Instituto CUF de Oncologia Virology Service Portuguese Oncology Institute of Porto Research department-Portuguese League Against Cancer(Liga Portuguesa Contra o Cancro-Núcleo Regional do Norte) Gastroenterology Service Portuguese Oncology Institute of Porto CINTESIS-Center for Health Technology and Services Research(Centro de Investigacao Médica Faculdade de Medicina da Universidade do Porto)

AIM To determine the prevalence of epstein-barr virus(eb V)-associated gastric carcinomas in the North Region of Portugal and to study its clinicopathological characteristics. METHODS We have performed a retrospective study including a total of 179 consecutive patients with gastric cancer(GC) submitted to gastrectomy during 2011 at the Portuguese Oncology Institute of Porto. Clinical and pathological data was collected from individual clinical records and inserted on a database with unique codification. Tumour tissues were collected from the institutional tumour bank. eb V was detected by in situ hybridization for the detection of eb V-encoded small RNAs(ebe Rs) and eb V latent proteins(LMP1 and LMP2 A) were detected by *** The analysis showed that eb V-associated gastric carcinomas(eb Va GC) represents 8.4%(15/179) of all GC cases, with a significant differential distribution among histological types(P denosquamous carcinoma, 8.7%(8/92) of tubular adenocarcinomas, 8.0%(2/25) of mixed carcinomas and 2%(1/51) in poorly cohesive carcinomas. The analysis revealed a higher predominance of eb Va GC in the upper third and middle(cardia, fundus and body) of the stomach(P = 0.041), a significant lower number of regional lymph nodes invasion(P = 0.025) and a tendency for better prognosis(P = 0.222). eb V latent protein expression revealed that all eb Va GC cases were LMP1-negative, nevertheless 6 cases(40%) expressed LPM2 A, which reveals that these cases show a distinct eb V-Latency profile(latency II-like).CONCLUSION eb Va GC represents 8.4% of all GC in the North Region of Portugal. The eb V-infected patients have specific clinic-pathological features that should be further explored to develop new strategies of management and treatment.

关键词： Gastric cancer Epstein-barr virus Prevalencel Epstein-barr virus-associated gastric carcinomas

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On Conditionally Positive definite Dot Product Kernels

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Acta Mathematica Sinica,English Series 2008年第7期24卷 1127-1138页

作者： V.A.MENEGATTO C.P.oliveira ana P.PERON departamento de Matemática ICMC-USP- Sāo CarlosCaixa Postal 66813560-970 Sāo Carlos SPBrasil Universidade Federal de Itajubá ICE-DMCCaixa Postal 5037500-903 ItajubáMGBrasil

Let m and n be fixed, positive integers and P a space composed of real polynomials in m variables. The authors study functions f ： R →R which map Gram matrices, based upon n points of R^m, into matrices, which are nonnegative definite with respect to P Among other things, the authors discuss continuity, differentiability, convexity, and convexity in the sense of Jensen, of such functions

关键词： conditionally positive definite kernels dot product kernels Gram matrices convexity convexity in the sense of Jensen

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The Sustainable Expansion of the Cocoa Crop in the State of Paráand Its Contribution to Altered Areas Recovery and Fire Reduction

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Journal of Geographic Information System 2022年第3期14卷 294-313页

作者： Adriano Venturieri Rodrigo Rafael Souza de oliveira Tassio Koiti Igawa Katia de Avila Fernandes Marcos Adami Moisés Cordeiro Mourão de oliveira Júnior Cláudio Aparecido Almeida Luiz Guilherme Teixeira Silva ana I. R. Cabral João Felipe Kneipp Cerqueira Pinto Antônio José Amorim Menezes Sandra maria Neiva Sampaio Embrapa Eastern Amazonia Belém Brazil University of Para State Belém Brazil Coordination for the Improvement of Higher Education Personnel Belém Brazil University of Arkansas Fayetteville USA International Research Institute for Climate and Society Columbia University New York USA National Institute for Space Research S&#227 o José dos Campos S&#227 o Paulo Forest Research Centre School of Agriculture University of Lisbon Lisbon Portugal Research development Foundation S&#227 o José dos Campos Brazil

The state of Pará, located in the Amazon region of Brazil, has observed in recent years an increase in cocoa (Theobroma cacao) cultivation and has become the largest producer in Brazil. Due to its physiological characteristics, cacao is cultivated in native forests understory or under the shade produced by fast-growing native tree species, serving as an important species for restoration of degraded areas. However, mapping and monitoring cocoa plantation using optical sensor images is a challenge given its botanical and arboreal characteristics that can be confused with other native species at various stages of secondary regrowth. Agroforestry systems are important components of sustainable production in the Amazon and our work sought to better describe the evolution of cocoa plantations in terms of their historical expansion, farming properties practices, land use transitions and fire regimes. Our findings to analyze the relationships between cocoa plantations and hotspots, data from the INPE’s reference satellite between the years 2004 to 2020 were used in this study, polygons classified as cocoa areas, generated by the MapCacau research project, were used, in a total of 69,904 hectares distributed throughout the state of Pará. Finally, we used the protected areas’ official limits in the State of Pará to analyze the plantations’ occurrence in regions in discordance with environmental legislation. The data show that cocoa-producing properties are statistically fewer than non-producing properties, as well as having lower deforestation rates. In our study, we observed that 52,778 hectares (88.87%) of the cocoa area planted had already been deforested by the year 2008—the threshold of deforestation defined by Brazil’s Forest Code. It was also possible to verify that approximately 20,900 hectares continue to be mapped as forest by PROdeS, despite our field data identifying cocoa plantations shaded by explored forest in these areas. Regarding the crop’s formation, the da

关键词： Amazon Machine Learning Participative Mapping Pará Cocoa Amazon MapCacau

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Measuring External debt in a Context of Macroeconomic Imbalances

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Journal of Mathematics and System Science 2014年第3期4卷 202-207页

作者： Joao Cadete de Matos ana Margarida de Almeida Ligia maria Nunes Daniela Black miranda Director Banco de Portugal Statistics Department Lisboa Portugal deputy-Director Banco de Portugal Statistics Department Lisboa Portugal Banco de Portugal Statistics Department Lisboa Portugal

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