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Cancer cell cycle heterogeneity as a critical determinant of therapeutic resistance

Genes & Diseases 2024年第1期11卷 189-204页

作者： Ebrahim H.Maleki ahmad reza bahrami Maryam M.Matin Department of Biology Faculty of ScienceFerdowsi University of Mashhad*** MashhadIran Jagiellonian Centre for Experimental Therapeutics(JCET) Jagiellonian University31-007 KrakowPoland Doctoral School of Exact and Natural Sciences Jagiellonian University30-348 KrakowPoland Industrial Biotechnology Research Group Institute of BiotechnologyFerdowsi University of Mashhad*** MashhadIran Novel Diagnostics and Therapeutics Research Group Institute of BiotechnologyFerdowsi University of Mashhad***MashhadIran Stem Cell and Regenerative Medicine Research Group Iranian Academic Center for EducationCulture and Research(ACECR)Khorasan Razavi Branch917751376 MashhadIran

Intra-tumor heterogeneity is now arguably one of the most-studied topics in tumor biology,as it represents a major obstacle to effective cancer *** tumor cells are highly diverse at genetic,epigenetic,and phenotypic levels,intra-tumor heterogeneity can be assumed as an important contributing factor to the nullification of chemotherapeutic effects,and recurrence of the *** on the role of heterogeneous subpopulations of cancer cells with varying cell-cycle dynamics and behavior during cancer progression and treatment;herein,we aim to establish a comprehensive definition for adaptation of neoplastic cells against *** discuss two parallel and yet distinct subpopulations of tumor cells that play pivotal roles in reducing the effects of chemotherapy:"resistant"and"tolerant"***,this review also highlights the impact of the quiescent phase of the cell cycle as a survival mechanism for cancer *** understanding the mechanisms under-lying the quiescence,it provides an insightful perspective on cancer stem cells(CsCs)and their dual and intertwined functions based on their cell cycle state in response to ***-over,CSCs,epithelial-mesenchymal transformed cells,circulating tumor cells(CTCs),and disseminated tumor cells(DTCs),which are mostly in a quiescent state of the cell cycle are proved to have multiple biological links and can be implicated in our viewpoint of cell cycle heterogeneity in ***,increasing our knowledge of cell cycle heterogeneity is a key to identifying new therapeutic solutions,and this emerging concept may provide us with new opportunities to prevent the dreadful cancer recurrence.

关键词： Cancer stem cells(CSCs) Carcinoma Cell cycle heterogeneity Quiescence Therapy resistance Therapy tolerance Tumor dormancy

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Isolation and molecular identification of cellulolytic bacteria from Dig Rostam hot spring and study of their cellulase activity

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BIOCELL 2020年第1期44卷 63-71页

作者： Sareh HAJIABADI Mansour MASHREGHI ahmad reza bahrami Kiarash GHAZVINI Maryam M.MATIN Department of Biology Faculty of ScienceFerdowsi University of MashhadMashhadIran Novel Diagnostics and Therapeutics Research Group Institute of BiotechnologyFerdowsi University of MashhadMashhadIran Microbiology Research Center&Department of Microbiology and Virology Ghaem Medical CenterMashhad University of Medical SciencesMashhadIran

Cellulose is the main structural component of lignocellulosic wastes that can be converted to sugars and biofuels by *** to wide applications of this enzyme in various industries around the world,cellulase is considered as the third industrial *** ability of thermophilic bacteria in the production of heat-stable cellulases has made them valuable tools in *** aim of this study was isolation and molecular identification of cellulolytic thermophile bacteria from Dig Rostam hot spring and investigating their cellulase *** were taken from water and sediments of this hot spring,and cellulolytic bacteria were enriched in media containing cellulose as the only carbon *** bacteria were incubated at 60℃,and single colonies were then isolated on solid *** red assay was used as a quick test for the qualitative screening of cellulase *** to these qualitative results,four colonies named CDB1,CDB2,CDB3,and CDB4 were isolated,and their growth curve and some other characteristics were determined by biochemical ***,endoglucanase,exoglucanase,and FPase activities of the isolates were investigated *** indicated that CDB1 exhibited the highest endoglucanase(0.096 U/mL)and exoglucanase(0.156 U/mL)activities among other isolates.16S rDNA partial sequencing indicated that CDB1 had 99%similarity to the genus Anoxybacillus,and the other isolates showed the highest similarity to the genus *** cellulase gene of CDB1 isolate with the highest cellulase activity was also cloned,and its sequence is reported for the first *** studies on this thermophilic enzyme might be useful for industrial applications.

关键词： Anoxybacillus Cellulase Enzyme activity assay Thermophilic bacteria 16S rDNA

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Intravenous transplantation of bone marrow mesenchymal stem cells promotes neural regeneration after traumatic brain injury

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Neural Regeneration Research 2014年第9期9卷 919-923页

作者： Fatemeh Anbari Mohammad Ali Khalili ahmad reza bahrami Arezoo Khoradmehr Fatemeh Sadeghian Farzaneh Fesahat Ali Nabi Research and Clinical Center for Infertility Shahid Sadoughi University of Medical Sciences Institute of Biotechnology Ferdowsi University of Mashhad

To investigate the supplement of lost nerve cells in rats with traumatic brain injury by intravenous administration of allogenic bone marrow mesenchymal stem cells, this study established a Wistar rat model of traumatic brain injury by weight drop impact acceleration method and administered 3 × 106 rat bone marrow mesenchymal stem cells via the lateral tail vein. At 14 days after cell transplantation, bone marrow mesenchymal stem cells differentiated into neurons and astrocytes in injured rat cerebral cortex and rat neurological function was improved significantly. These findings suggest that intravenously administered bone marrow mesenchymal stem cells can promote nerve cell regeneration in injured cerebral cortex, which supplement the lost nerve cells.

关键词： nerve regeneration bone marrow mesenchymal stem cells traumatic brain injury intravenous administration cell differentiation neurologic function,cerebral cortex rats neural regeneration

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Emerging insights into the function of very long chain fatty acids at cerebellar synapses

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Neural Regeneration Research 2025年第6期20卷 1709-1710页

作者： Martin-Paul Agbaga Mohiuddin ahmad Department of Cell Biology and Ophthalmology University of Oklahoma Health Sciences Centerand Dean McGee Eye InstituteOklahoma CityOKUSA

Very long chain-saturated and-polyunsaturated fatty acids(VLC-SFA and VLC-PUFA, respectively) are a functionally important class of fatty acids containing 28 carbons or more in their acyl chain. They are synthesized by the elongation of very long fatty acids-4(ELOVL4) enzyme, expressed mainly in the brain, retina, skin, testes, and meibomian gland, where these fatty acids are found(Agbaga et al., 2008). Further, these organs exhibit tissuespecific VLC-PUFA and VLC-SFA biosynthesis and incorporation into complex lipids for specific functions. In the brain, skin, and Meibomian glands, the ELOVL4 mainly makes VLC-SFA, which are incorporated into complex sphingolipids. In the retina, the ELOVL4 makes VLC-PUFA that are incorporated into phosphatidylcholine, that are critical for visual function, while in testes and sperm, the VLC-PUFA are incorporated into sphingolipids that are critical for fertility(Yeboah et al., 2021).

关键词： functions function insight

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Secure Channel Estimation Using Norm Estimation Model for 5G Next Generation Wireless Networks

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Computers, Materials & Continua 2025年第1期82卷 1151-1169页

作者： Khalil Ullah Song Jian Muhammad Naeem Ul Hassan Suliman Khan Mohammad Babar Arshad ahmad Shafiq ahmad Faculty of Information Engineering and Automation Kunming University of Science and TechnologyKunming650500China Department of Computer Science Abbottabad University of Science and TechnologyHavelianAbbottabad22500Pakistan Department of Computing and Electronics Engineering Middle East CollegeMuscat124Oman Department of CS&IT Pak-Austria Fachhochschule Institute of Applied Sciences and Technology MangHaripur22621Pakistan Industrial Engineering Department College of EngineeringKing Saud UniversityRiyadh11421Saudi Arabia

The emergence of next generation networks(NextG),including 5G and beyond,is reshaping the technological landscape of cellular and mobile *** networks are sufficiently scaled to interconnect billions of users and *** in academia and industry are focusing on technological advancements to achieve highspeed transmission,cell planning,and latency reduction to facilitate emerging applications such as virtual reality,the metaverse,smart cities,smart health,and autonomous *** continuously improves its network functionality to support these *** input multiple output(MIMO)technology offers spectral efficiency,dependability,and overall performance in *** article proposes a secure channel estimation technique in MIMO topology using a norm-estimation model to provide comprehensive insights into protecting NextG network components against adversarial *** technique aims to create long-lasting and secure NextG networks using this extended *** viability of MIMO applications and modern AI-driven methodologies to combat cybersecurity threats are explored in this ***,the proposed model demonstrates high performance in terms of reliability and accuracy,with a 20%reduction in the MalOut-RealOut-Diff metric compared to existing state-of-the-art techniques.

关键词： Next generation networks massive mimo communication network artificial intelligence 5G adversarial attacks channel estimation information security

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IDSSCNN-XgBoost:Improved Dual-Stream Shallow Convolutional Neural Network Based on Extreme Gradient Boosting Algorithm for Micro Expression Recognition

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Computers, Materials & Continua 2025年第1期82卷 729-749页

作者： Adnan ahmad Zhao Li Irfan Tariq Zhengran He School of Information Science and Engineering Southeast UniversityNanjing210016China

Micro-expressions(ME)recognition is a complex task that requires advanced techniques to extract informative features fromfacial *** deep neural networks(DNNs)with convolutional structures have been ***,unlike DNNs,shallow convolutional neural networks often outperform deeper models in mitigating overfitting,particularly with small ***,many of these methods rely on a single feature for recognition,resulting in an insufficient ability to extract highly effective *** address this limitation,in this paper,an Improved Dual-stream Shallow Convolutional Neural Network based on an Extreme Gradient Boosting Algorithm(IDSSCNN-XgBoost)is introduced for ME *** proposed method utilizes a dual-stream architecture where motion vectors(temporal features)are extracted using Optical Flow TV-L1 and amplify subtle changes(spatial features)via EulerianVideoMagnification(EVM).These features are processed by IDSSCNN,with an attention mechanism applied to refine the extracted effective *** outputs are then fused,concatenated,and classified using the XgBoost *** comprehensive approach significantly improves recognition accuracy by leveraging the strengths of both temporal and spatial information,supported by the robust classification power of *** proposed method is evaluated on three publicly available ME databases named Chinese Academy of Sciences Micro-expression Database(CASMEII),Spontaneous Micro-Expression Database(SMICHS),and Spontaneous Actions and Micro-Movements(SAMM).Experimental results indicate that the proposed model can achieve outstanding results compared to recent *** accuracy results are 79.01%,69.22%,and 68.99%on CASMEII,SMIC-HS,and SAMM,and the F1-score are 75.47%,68.91%,and 63.84%,*** proposed method has the advantage of operational efficiency and less computational time.

关键词： ME recognition dual stream shallow convolutional neural network euler video magnification TV-L1 XgBoost

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A Latency-Aware and Fault-Tolerant Framework for Resource Scheduling and Data Management in Fog-Enabled Smart City Transportation Systems

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Computers, Materials & Continua 2025年第1期82卷 1377-1399页

作者： Ibrar Afzal Noor ul Amin Zulfiqar ahmad Abdulmohsen Algarni Department of Computer Science and Information Technology Hazara UniversityMansehra21300Pakistan Department of Computer Science King Khalid UniversityAbha61421Saudi Arabia

Thedeployment of the Internet of Things(IoT)with smart sensors has facilitated the emergence of fog computing as an important technology for delivering services to smart environments such as campuses,smart cities,and smart transportation *** computing tackles a range of challenges,including processing,storage,bandwidth,latency,and reliability,by locally distributing secure information through end *** of endpoints,fog nodes,and back-end cloud infrastructure,it provides advanced capabilities beyond traditional cloud *** smart environments,particularly within smart city transportation systems,the abundance of devices and nodes poses significant challenges related to power consumption and system *** address the challenges of latency,energy consumption,and fault tolerance in these environments,this paper proposes a latency-aware,faulttolerant framework for resource scheduling and data management,referred to as the FORD framework,for smart cities in fog *** framework is designed to meet the demands of time-sensitive applications,such as those in smart transportation *** FORD framework incorporates latency-aware resource scheduling to optimize task execution in smart city environments,leveraging resources from both fog and cloud *** simulation-based executions,tasks are allocated to the nearest available nodes with minimum *** the event of execution failure,a fault-tolerantmechanism is employed to ensure the successful completion of *** successful execution,data is efficiently stored in the cloud data center,ensuring data integrity and reliability within the smart city ecosystem.

关键词： Fog computing smart cities smart transportation data management fault tolerance resource scheduling

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Review of Techniques for Integrating Security in Software Development Lifecycle

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Computers, Materials & Continua 2025年第1期82卷 139-172页

作者： Hassan Saeed Imran Shafi Jamil ahmad Adnan Ahmed Khan Tahir Khurshaid Imran Ashraf College of Electrical and Mechanical Engineering National University of Sciences and Technology(NUST)Rawalpindi46604Pakistan Department of Computer Science Abasyn University Islamabad CampusIslamabad45510Pakistan Military College of Signals National University of Sciences and Technology(NUST)Rawalpindi46600Pakistan Department of Electrical Engineering Yeungnam UniversityGyeongsan38541Republic of Korea Department of Information and Communication Engineering Yeungnam UniversityGyeongsan38541Republic of Korea

Software-related security aspects are a growing and legitimate concern,especially with 5G data available just at our *** conduct research in this field,periodic comparative analysis is needed with the new techniques coming up *** purpose of this study is to review the recent developments in the field of security integration in the software development lifecycle(SDLC)by analyzing the articles published in the last two decades and to propose a way *** review follows Kitchenham’s review *** review has been divided into three main stages including planning,execution,and *** the selected 100 articles,it becomes evident that need of a collaborative approach is necessary for addressing critical software security risks(CSSRs)through effective risk management/estimation *** risks using a numeric scale enables a comprehensive understanding of their severity,facilitating focused resource allocation and mitigation *** a comprehensive understanding of potential vulnerabilities and proactive mitigation efforts facilitated by protection poker,organizations can prioritize resources effectively to ensure the successful outcome of projects and initiatives in today’s dynamic threat *** review reveals that threat analysis and security testing are needed to develop automated tools for the *** estimation of effort required to prioritize potential security risks is a big challenge in software *** accuracy of effort estimation can be further improved by exploring new techniques,particularly those involving deep *** is also imperative to validate these effort estimation methods to ensure all potential security threats are *** challenge is selecting the right model for each specific security *** achieve a comprehensive evaluation,researchers should use well-known benchmark checklists.

关键词： Software development lifecycle systematic literature review critical software security risks national institute of standards and technology DevSecOps open web application security project McGraw’s touch points

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Kinetic grain growth, shape memory and corrosion behavior of two Cu-based shape memory alloys after thermomechanical treatment

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Transactions of Nonferrous Metals Society of China 2013年第10期23卷 2896-2904页

作者： ahmad Ostovari MOGHADDAM Mostafa KETABCHI reza bahrami Department of Mining and Metallurgical Engineering Amirkabir University of Technology

Metallurgical and mechanical properties along with shape memory and corrosion behavior of Cu-11.8% AI-3.7% Ni-1 %Mn and Cu-11% A1 5.6% Mn shape memory alloys （SMAs） were comparatively studied. The influence of grain refinement on the properties was studied by optical microscopy （OM）, scanning electron microscopy （SEM）, differential scanning calorimetry （DSC）, potentiodynamic polarizations and bend and tensile tests. Static recrystallization and kinetic grain growth show a rapid recrystallization in the first 15 s of annealing at 800℃ followed by grain growths. The minimum grain sizes obtained after 15 s are 90 and 260 μm for Cu-A1-Ni-Mn and Cu-A1-Mn, respectively. Tensile tests show typical three-stage curves for both alloys, and it is seen that alloys exhibit high fracture stress and strain after grain refinement. Microstructural observations show zig-zag morphology of β 1martensite in the Cu-A1-Ni-Mn and coexistence of β1 and y1 in the Cu-A1-Mn, which were confirmed by differential scanning calorimetry results. The shape memory ratios （17） of the alloys before thermomechanieal treatment, and after thermomechanical annealing at 800 ℃ for different time up to 15 min followed by water quenching, were evaluated. In addition, corrosion behavior of alloys after grain refinement was analyzed by means of potentiodynamic polarization measurements. The results showed that the anodic reactions were dominated by dissolution of copper, and Cu-AI-Ni-Mn alloy exhibits a better corrosion resistance than Cu-A1-Mn alloy.

关键词： shape memory alloys (SMAs) grain refinement corrosion shape memory properties

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The impact of Persian oak (Quercus brantii Lindl.) on soil characteristics in a declining forest

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Journal of Forestry Research 2020年第6期31卷 2359-2366页

作者： reza Soleimani ahmad Hosseini Crop and Horticultural Science Research Department Ilam Agricultural and Natural Resources Research and Education CenterAREEOIlamIran Forests and Rangelands Research Department Ilam Agricultural and Natural Resources Research and Education CenterAREEOIlamIran

Root activity has an important impact on soil development but we have little knowledge of the interaction of the root zone and soil genetic *** aim of this investigation was to study the interactions between soil chemical characteristics and root zone processes in a declining Persian oak forest(Quercus brantii Lindl.).A randomized complete block design was used to investigate the long-term eff ect of Persian oak on soil horizons,and the chemical and biological properties in two soil zones(under and outside the canopy).Results indicate that the rhizosphere zone had signifi cantly higher total organic carbon(TOC)than outside the canopy soil in the upper soil *** subsurface horizons,water-extractable organic carbon values were signifi cantly higher in rhizosphere than in non-rhizospheric *** biomass carbon(MBC)values in the rhizospheric zone decreased from the fi rst to the second *** MBC/TOC ratio indicated signifi-cant diff erences between the rhizosphere and soils outside of the canopy,with the exception of the subsurface *** the subsurface horizon of the rhizosphere,there was greater respiration of organic carbon(ΣCO 2/TOC)than in outside of canopy *** addition,root processes infl uenced pH,nitrogen fractions,and availability of phosphorus,potassium,iron,zinc and *** erences in soil characteristics between rhizospheric and non-rhizospheric zones were signifi cant in surface horizons due to higher root density than in deeper soil *** fi ndings indicate that Persian oak(Quercus brantii Lindl.)roots infl uenced the main soil chemical properties,even in calcareous soils.

关键词： Declining forest Persian oak Rhizosphere Soil horizons

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