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Chinese Journal of Oceanology and Limnology 2015年第6期33卷 1496-1504页

作者： aharon oren Department of Plant and Environmental Sciences Alexander Silberman Institute of Life SciencesHebrew University of Jerusalem

The first modem survey of the Dead Sea was performed by the Geological Survey of Israel in 1959-1960, and the report published remains the baseline study for our understanding of the physical and chemical properties of the lake. At the time the Dead Sea was a meromictic lake with a strong salinity gradient separating the deep waters （〉40 m depth） from the less saline surface waters. A few results of analyses of deeper water samples collected in the 1930s were reported, but overall we have very little information about the structure of the lake＇s water column before the 1959-1960 survey. However, it is little known that data on the physical and the chemical structure of the Dead Sea water column were obtained already in the middle of the 19~ century, and the information collected then is highly relevant for the reconstruction of the limnological properties of the lake in earlier times. The expedition of Lieutenant William Lynch （U.S. Navy） in 1848 reported the presence of a temperature minimum at a depth of-18 m, and also retrieved a water sample collected close to the bottom for chemical analysis. In 1864, the French Dead Sea exploration by the Duc de Luynes and his crew yielded detailed density and salinity profiles for a number of sampling stations. The results of these pioneering studies are discussed here, as well as the sampling equipment and measuring instruments used by the 1848 and the 1864 expeditions.

关键词： Dead Sea stratification research history sampling equipment self-registering thermometer

Past,present and future of saline lakes:research for global sustainable development

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Chinese Journal of Oceanology and Limnology 2015年第6期33卷 1349-1353页

作者： Nickolai SHADRIN 郑绵平 aharon oren Institute of Marine Biological Research MLR Key Laboratory of Saline Lake Resources and Environments Institute of Mineral ResourcesChinese Academy of Geological Sciences Department of Plant and Environmental Sciences The Alexander Silberman Institute of Life SciencesThe Hebrew University of JerusalemEdmond J.Safra Campus

The 12 th International Conference on Salt Lake Research was held in Langfang City,China from July 14 to 18,*** manuscripts of presentations have been retained for publication in this special *** are very diverse,covering the biology,physics,chemistry and geology of salt lakes,the history of hydrological research on the Dead Sea,the effects of socioeconomic and environmental policies by stakeholders on human populations,and the increasing salinization of freshwater lakes around the world.

关键词：全球可持续发展盐湖国际会议环境政策社会经济淡水湖泊廊坊市生物学

Two and a Half Thousand Years of Navigation on the Dead Sea

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Acta Geologica Sinica(English Edition) 2014年第S1期88卷 432-433页

作者： aharon oren Department of Plant and Environmental Sciences The Institute of Life Sciences The Hebrew University of JerusalemEdmond J.Safra CampusGivat Ram

Today there is a single ship on the Dead Sea:a vessel that makes monthly research *** in earlier periods many kinds of boats sailed the waves of the saltiest of all *** and wooden anchors found on the newly

关键词： Two and a Half Thousand Years of Navigation on the Dead Sea

Microbial community structure and nitrogenase gene diversity of sediment from a deep-sea hydrothermal vent field on the Southwest Indian Ridge

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Acta Oceanologica Sinica 2014年第10期33卷 94-104页

作者： WU Yuehong CAO Yi WANG Chunsheng WU Min aharon oren XU Xuewei Laboratory of Marine Ecosystem and Biogeochemistry Second Institute of Oceanography State Oceanic Administration State Key Laboratory of Microbial Resources Institute of Microbiology Chinese Academy of Sciences College of Life Sciences Zhejiang University Department of Plant and Environmental Sciences the Alexander Silberman Institute of Life Sciences The Hebrew University of JerusalemJerusalem 91904 Israel The Hebrew University of Jerusalem The Edmond J. Safra CampusGivat Ram Jerusalem 91904 Israel

A sediment sample was collected from a deep-sea hydrothermal vent field located at a depth of 2 951 m on the Southwest Indian Ridge. Phylogenetic analyses were performed on the prokaryotic community using polymerase chain reaction（PCR） amplification of the 16 S rRNA and nifH genes. Within the Archaea, the dominant clones were from marine benthic group E（MBGE） and marine group I（MGI） belonging to the phyla Euryarchaeota and Thaumarchaeota, respectively. More than half of the bacterial clones belonged to the Proteobacteria, and most fell within the Gammaproteobacteria. No epsilonproteobacterial sequence was observed. Additional phyla were detected including the Actinobacteria, Bacteroidetes, Planctomycetes, Acidobacteria, Nitrospirae, Chloroflexi, Chlorobi, Chlamydiae, Verrucomicrobia, and candidate divisions OD1, OP11, WS3 and TM6, confirming their existence in hydrothermal vent environments. The detection of nifH gene suggests that biological nitrogen fixation may occur in the hydrothermal vent field of the Southwest Indian Ridge. Phylogenetic analysis indicated that only Clusters I and III NifH were present. This is consistent with the phylogenetic analysis of the microbial 16 S rRNA genes, indicating that Bacteria play the main role in nitrogen fixation in this hydrothermal vent environment.

关键词： deep-sea hydrothermal vent microbial diversity 16S rRNA gene nifH gene

Preface:Value and dynamics of salt lakes in a changing world

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Journal of Oceanology and Limnology 2018年第6期36卷 1901-1906页

作者： aharon oren 邓天龙 Nikolai V.SHADRIN 郑绵平 Egor S.ZADEREEV Department of Plant and Environmental Sciences the Alexander Silberman Institute of Life Sciencesthe Hebrew University of Jerusalemthe Edmond J.Safra CampusJerusalem 9190401Israel Tianjin Key Laboratory of Marine Resources and Chemistry College of Marine Science and EngineeringTianjin University of Sciences and EngineeringTianjin 200347China Institute of Marine Biological Research Russian Academy of SciencesSevastopol 299011Russia MLR Key Laboratory of Saline Lake Resources and Environments Institute of Mineral ResourcesCAGSBeijing 100037China Institute of Biophysics Krasnoyarsk Research CenterSiberian BranchRussian Academy of SciencesAkademgorodokKrasnoyarsk 660036Russia Siberian Federal University Svobodniy 79Krasnoyarsk 660041Russia

The statement that the world’s ecosystems are rapidly deteriorating due to human intervention and global warming is nowadays *** of the ecosystems most heavily impacted are inland salt *** salt lakes are among the most valuable and fascinating ecosystems on Earth,and their study has both basic scientifi c interest as well as applied aspects.

关键词： Preface Value and dynamics of salt lakes in a changing world

第七届全国微生物资源学术暨国际微生物系统与分类学研讨会:评论和结论（英文）

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微生物学通报 2016年第5期43卷 895-898页

作者： aharon oren Department of Plant and Environmental Sciences The Institute of Life Sciences The Hebrew University of Jerusalem Edmond J. Safra Campus 91904 Jerusalem Israel

At the annual meeting of the editorial board of the International Journal of Systematic and Evolutionary Microbiology(IJSEM),held in Hangzhou,Zhejiang,on August 30,2015,the editors were presented with some statistics about submissions of papers to the journal from different *** is number 1:in 2014,31.2%of all submissions came from China,leaving South Korea with 14.8%far *** China there has been

关键词：微生物系统 editorial Hangzhou 微生物资源 behind leaving Korea

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*** Namsaraev 1943–2015

Chinese Journal of Oceanology and Limnology 2015年第6期33卷 1353-1353页

作者： Zorigto Namsaraev Nickolai Shadrin Mianping Zheng aharon oren

September 5,2015 *** Namsaraev,the leader in aquatic microbiology of Siberian lakes,passed away after battle with *** was 72 years *** was born in 1943 in the small village in Southern Siberia in the family of a school *** had 6 brothers and *** school he worked on the collective farm and served in the Soviet *** 1965 he entered Moscow State *** graduating in 1970 Bair started his Ph D work on the hydrogen oxidizing bacteria at the Institute of Microbiology in *** 1973 he worked at the Institute of Physiology and Biochemistry of Microorganisms

关键词：贝尔西伯利亚微生物学学校工作苏联军队莫斯科

来源于中国南海的微生物新种乙醇速生杆菌(Celeribacter ethanolicus)多相分类研究（英文）

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微生物学通报 2016年第5期43卷 907-916页

作者：简书令吴月红买热帕提阿依迪丽拜尔托乎提 aharon oren 许学伟国家海洋局第二海洋研究所国家海洋局海洋生态系统与生物地球化学重点实验室浙江杭州310012 新疆师范大学生命科学学院新疆乌鲁木齐830054 Department of Plant and Environmental Sciences The Alexander Silberman Institute of Life SciencesThe Hebrew University of JerusalemThe Edmond J.Safra CampusGivat RamJerusalem 91904Israel

【目的】研究来源于南海海水的一株速生杆菌属菌株NH195T的多相分类。【方法】采用表型、基因型和化学分类方法,并综合系统发育关系结果,分析菌株NH195T的分类学地位。【结果】菌株NH195T是一株革兰氏阴性、好氧、杆状、无运动性细菌;... 详细信息

【目的】研究来源于南海海水的一株速生杆菌属菌株NH195T的多相分类。【方法】采用表型、基因型和化学分类方法,并综合系统发育关系结果,分析菌株NH195T的分类学地位。【结果】菌株NH195T是一株革兰氏阴性、好氧、杆状、无运动性细菌;能积累Poly-β-hydroxy butyrate(PHB);能在0.5%-10.0%(质量体积比)NaCl浓度,pH 5.0-9.0和20-40°C条件下生长,最适NaCl生长浓度为1.0%-3.0%;氧化酶、触酶和脲酶反应结果阳性。菌株NH195T主要呼吸醌为Q-10,主要脂肪酸为C18:1ω7c、C18:1ω6c和11 methyl C_(18:1)ω7c,主要极性脂为磷脂酰胆碱、磷脂酰甘油、双磷脂酰甘油、一个未知的氨基脂和两个未知脂。基因组G+C含量为61.3 mol%。基于16S rRNA基因的系统发育结果显示,菌株NH195T隶属于速生杆菌属;其与速生杆菌属标准菌株的16S rRNA基因相似性范围为94.4%-97.7%。菌株NH195T与速生杆菌属标准菌株*** ZXM137T和*** P73T的平均核苷酸一致性(ANI)分别为78.6%和78.0%;基于基因组数据计算所得的DNA杂交同源率分别为26.1%和23.0%。【结论】基于表型和基因型结果,菌株NH195T代表了速生杆菌属一个新物种,命名为Celeribacter ethanolicus,标准菌株为NH195T(CGMCC 1.15406T=JCM 31095T)。

关键词：乙醇速生杆菌多相分类海水中国南海

Advancements in prokaryotic systematics and the role of Bergey's International Society for Microbial Systematics in addressing challenges in the meta-data era

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National Science Review 2024年第7期11卷 292-304页

作者： Jian-Yu Jiao Rashidin Abdugheni Dao-Feng Zhang Iftikhar Ahmed Mukhtiar Ali Maria Chuvochina Svetlana N.Dedysh Xiuzhu Dong Markus G?ker Brian P.Hedlund Philip Hugenholtz Kamlesh Jangid Shuang-Jiang Liu Edward R.B.Moore Manik Prabhu Narsing Rao aharon oren Ramon Rossello-Mora Bhagwan Narayan Rekadwad Nimaichand Salam Wensheng Shu Iain C.Sutcliffe Wee Fei Aaron Teo Martha E.Trujillo Stephanus N.Venter William B.Whitman Guoping Zhao Wen-Jun Li State Key Laboratory of Biocontrol Guangdong Provincial Key Laboratory of Plant Resources and Southern Marine Science and Engineering Guangdong Laboratory(Zhuhai) School of Life Sciences Sun Yat-Sen University State Key Laboratory of Desert and Oasis Ecology Key Laboratory of Ecological Safety and Sustainable Development in Arid LandsXinjiang Institute of Ecology and Geography Chinese Academy of Sciences Jiangsu Province Engineering Research Center for Marine Bio-resources Sustainable Utilization&College of Oceanography Hohai University National Culture Collection of Pakistan(NCCP) Land Resources Research Institute(LRRI) National Agricultural Research Centre(NARC) The University of Queensland School of Chemistry and Molecular Biosciences Australian Centre for Ecogenomics Winogradsky Institute of Microbiology Research Center of BiotechnologyRussian Academy of Sciences State Key Laboratory of Microbial Resources Institute of Microbiology Chinese Academy of Sciences Leibniz Institute DSMZ–German Collection of Microorganisms and Cell Cultures School of Life Sciences University of Nevada Nevada Institute of Personalized Medicine University of Nevada Bioenergy Group MACS Collection of Microorganisms Agharkar Research Institute State Key Laboratory of Microbial Technology Shandong University Department of Infectious Disease Institute for Biomedicine and Culture Collection University of Gothenburg(CCUG) Institute for BiomedicineSahlgrenska AcademyUniversity of Gothenburg Instituto de Ciencias Aplicadas Facultad de Ingeniería Universidad Autónoma de Chile The Alexander Silberman Institute of Life Sciences The Edmond J.Safra Campus The Hebrew University of Jerusalem Marine Microbiology Group Department of Animal and Microbial Biodiversity Mediterranean Institute for Advanced Studies(IMEDEA CSIC-UIB) MicrobeAI Lab Division of Microbiology and Biotechnology Yenepoya Research Centre Yenepoya(Deemed to be University) National Agri-Food Biotechnology Institute Institute of Ecological Science Sch

Prokaryotes are ubiquitous in the biosphere, important for human health and drive diverse biological and environmental processes. Systematics of prokaryotes, whose origins can be traced to the discovery of microorganisms in the 17th century, has transitioned from a phenotype-based classification to a more comprehensive polyphasic taxonomy and eventually to the current genome-based taxonomic *** transition aligns with a foundational shift from studies focused on phenotypic traits that have limited comparative value to those using genome sequences. In this context, Bergey's Manual of Systematics of Archaea and Bacteria(BMSAB) and Bergey's International Society for Microbial Systematics(BISMiS) play a pivotal role in guiding prokaryotic systematics. This review focuses on the historical development of prokaryotic systematics with a focus on the roles of BMSAB and BISMiS. We also explore significant contributions and achievements by microbiologists, highlight the latest progress in the field and anticipate challenges and opportunities within prokaryotic systematics. Additionally, we outline five focal points of BISMiS that are aimed at addressing these challenges. In conclusion, our collaborative effort seeks to enhance ongoing advancements in prokaryotic systematics, ensuring its continued relevance and innovative characters in the contemporary landscape of genomics and bioinformatics.

关键词： prokaryotic systematics Bergey's Manual of Systematics of Archaea and Bacteria (BMSAB) Bergey's International Society for Microbial Systematics (BISMiS) meta-data era

p53:not just a tumor suppressor

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Journal of Molecular Cell Biology 2019年第7期11卷 539-543页

作者： Moshe oren Department of Molecular Cell Biology Weizmann Institute of ScienceRehovot 76100Israel

Nowadays,p53 is like a Dreamliner airplane,riding the high skies of cancer research with dignity and *** do not have to be a card-bearing p53 researcher to know about p53,care about it,and respect ***,this was not always *** a matter of fact,in the first years of p53 research,from its discovery in the late 1970's to about the end of the 1980's,p53 was more like a kite:one moment high up in the air,the next moment being dragged on the ground.

关键词： Dreamliner dignity ground