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Retinal regeneration requires dynamic Notch signaling

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Neural Regeneration Research 2022年第6期17卷 1199-1209页

作者： Leah j.Campbell jaclyn L.Levendusky Shannon A.Steines David R.hyde Department of Biological Sciences Center for Zebrafish ResearchCenter for Stem Cells and Regenerative MedicineUniversity of Notre DameNotre DameINUSA

Retinal damage in the adult zebrafish induces Müller glia reprogramming to produce neuronal progenitor cells that proliferate and differentiate into retinal *** signaling,which is a fundamental mechanism known to drive cell-cell communication,is required to maintain Müller glia in a quiescent state in the undamaged retina,and repression of Notch signaling is necessary for Müller glia to reenter the cell *** dynamic regulation of Notch signaling following retinal damage also directs proliferation and neurogenesis of the Müller glia-derived progenitor cells in a robust regeneration *** contrast,mammalian Müller glia respond to retinal damage by entering a prolonged gliotic state that leads to additional neuronal death and permanent vision *** the dynamic regulation of Notch signaling in the zebrafish retina may aid efforts to stimulate Müller glia reprogramming for regeneration of the diseased human *** findings identified DeltaB and Notch3 as the ligand-receptor pair that serves as the principal regulators of zebrafish Müller glia *** addition,multi-omics datasets and functional studies indicate that additional Notch receptors,ligands,and target genes regulate cell proliferation and neurogenesis during the regeneration time ***,our understanding of Notch signaling during retinal regeneration is *** fully appreciate the complex regulation of Notch signaling that is required for successful retinal regeneration,investigation of additional aspects of the pathway,such as post-translational modification of the receptors,ligand endocytosis,and interactions with other fundamental pathways is *** we review various modes of Notch signaling regulation in the context of the vertebrate retina to put recent research in perspective and to identify open areas of inquiry.

关键词： differentiation gliosis Müller glia neuronal progenitor cell Notch signaling proliferation quiescence retinal development retinal regeneration zebrafish

Profile of Bionectriaceae,Calcarisporiaceae,Hypocreaceae,Nectriaceae,Tilachlidiaceae,Ijuhyaceae ***.,Stromatonectriaceae *** Xanthonectriaceae ***

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Fungal Diversity 2023年第1期118卷 95-271页

作者： R.H.Perera K.D.hyde E.B.G.jones S.S.N.Maharachchikumbura D.Bundhun E.Camporesi A.Akulov j.K.Liu Z.Y.Liu Guizhou Key Laboratory of Agricultural Biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006GuizhouPeople’s Republic of China Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Mushroom Research Foundation 128 M.3 Ban Pa Deng T.Pa PaeA.Mae TaengChiang Mai 50150Thailand Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of ScienceKunming 650201YunnanPeople’s Republic of China World Agroforestry Centre East and Central AsiaKunming 650201YunnanPeople’s Republic of China Innovative Institute of Plant Health Zhongkai University of Agriculture and EngineeringHaizhu DistrictGuangzhou 510225People’s Republic of China School of Life Science and Technology University of Electronic Science and Technology of ChinaChengdu 611731People’s Republic of China Department of Entomology and Plant Pathology Faculty of AgricultureChiang Mai UniversityChiang Mai 50200Thailand Department of Botany and Microbiology College of ScienceKingdom of Saudi ArabiaKing Saud UniversityP.O Box 2455Riyadh 11451Saudi Arabia A.M.B Circolo Micologico“Giovanni Carini”C.P.314BresciaItaly A.M.B.Gruppo Micologico Forlivese“Antonio Cicognani”Via Roma 18ForliItaly Societaper Gli Studi Naturalistici Della Romagna C.P.143BagnacavalloRAItaly Department of Mycology and Plant Resistance V.N.Karazin Kharkiv National UniversityMaidan Svobody 4Kharkiv 61022Ukraine

This paper provides outlines for Bionectriaceae,Calcarisporiaceae,Hypocreaceae,Nectriaceae,Tilachlidiaceae,Ijuhy-aceae,Stromatonectriaceae and Xanthonectriaceae with taxonomic *** provide up-to-date DNA sequence-based phylogenies including combined gene analysis of ITS,LSU,rpb2,tef1 and tub2 for Hypocreales and accept 17 *** new families and 12 new species are introduced with descriptions and illustrations,while 13 new records and one new species combination are *** we mainly detail the taxonomy of Bionectriaceae,Hypocreaceae,Nectriaceae and Tilachlidiaceae,Ijuhyaceae ***.,Stromatonectriaceae *** Xanthonectriaceae *** introduced in this study based on phenotypic and molecular *** each family we provide a list of accepted genera,the taxo-nomic history,morphological descriptions,taxonomic placement based on DNA sequence data and illustrate the type *** of each family are illustrated based on the type herbarium material or fresh specimens where available,or provide relevant *** on ecological and economic importance of the families are also given.

关键词： 15 New taxa Genera incertae sedis Hypocreales New records Outline Phylogeny Sordariomycetes Taxonomy

Chilli anthracnose disease caused by Colletotrichum species

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journal of Zhejiang University-Science B(Biomedicine & Biotechnology) 2008年第10期9卷 764-778页

作者： Po Po THAN Haryudian PRIHASTUTI Sitthisack PHOULIVONG Paul W.j.TAYLOR Kevin D.hyde International Fungal Research and Development Centre the Research Institute of Resources InsectChinese Academy of ForestryKunming 650224ChinaBioMarkaSchool of Agriculture and Food SystemsUniversity of MelbourneVictoria 3010Australia Fungal Research Group School of ScienceMae Fah Luang UniversityTasudChiang Rai 57100ThailandDepartment of BiotechnologyFaculty of AgricultureBrawijaya UniversityMalang 65145Indonesia Fungal Research Group School of ScienceMae Fah Luang UniversityTasudChiang Rai 57100ThailandMushroom Research Centre128 Moo 3 T. Pa PaeA. Mae TaengChiang Mai 50150Thailand6Department of Plant ScienceFaculty of AgricultureNational University of LaosVientianeLao PDR BioMarka School of Agriculture and Food SystemsUniversity of MelbourneVictoria 3010Australia International Fungal Research and Development Centre the Research Institute of Resources InsectChinese Academy of ForestryKunming 650224ChinaFungal Research GroupSchool of ScienceMae Fah Luang UniversityTasudChiang Rai 57100Thailand

Anthracnose disease is one of the major economic constraints to chilli production worldwide, especially in tropical and subtropical regions. Accurate taxonomic information is necessary for effective disease control management. In the Colletotrichum patho-system, different Colletotrichum species can be associated with anthracnose of the same host. Little information is known concerning the interactions of the species associated with the chilli anthracnose although several Colletotrichum species have been reported as causal agents of chilli anthracnose disease worldwide. The ambiguous taxonomic status of Colletotrichum species has resulted in inaccurate identification which may cause practical problems in plant breeding and disease management. Although the management and control of anthracnose disease are still being extensively researched, commercial cultivars of Capsicum annuum that are resistant to the pathogens that cause chilli anthracnose have not yet been developed. This paper reviews the causal agents of chilli anthracnose, the disease cycle, conventional methods in identification of the pathogen and molecular approaches that have been used for the identification of Colletotrichum species. Pathogenetic variation and population structure of the causal agents of chilli anthracnose along with the current taxonomic status of Colletotrichum species are discussed. Future developments leading to the disease management strategies are suggested.

关键词：辣椒疾病管理辨别方法致病性

Morphological and molecular identification of Panus conchatus(Polyporaceae,Polyporales)from Yunnan Province,China

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Studies in Fungi 2019年第1期4卷 253-262页

作者： Luangharn T Karunarathna SC Mortimer PE hyde KD Xu j Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunmingYunnanChina University of Chinese Academy of Sciences Beijing 100049China East and Central Asia Regional Office World Agroforestry Centre(ICRAF)KunmingYunnanChina Centre for Mountain Ecosystem Studies(CMES) Kunming Institute of BotanyKunmingYunnanChina Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang RaiThailand

Panus conchatus is a species of lentinoid fungi in the family *** species is characterized by its concave,smooth,deeply decurrent gills,with distinctive purple grey to greyish magenta *** fungus is widely distributed in both tropical and temperate ***,we report a specimen of *** collected from a temperate region in Yunnan Province,*** specimen is described and illustrated based on macro-and micro-morphological *** analyses were done based on the sequence data of ITS and LSU,and the placement of the taxon was *** is the first time *** has been reported with molecular phylogenetic data from *** description,illustrations,color photographs,and a phylogenetic tree to show the placement of *** are provided.

关键词： agaricoid form hymenophoral trama lentinoid mushroom polyporales

Families in Botryosphaeriales:aphylogenetic,morphological and evolutionary perspective

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Fungal Diversity 2019年第1期94卷 1-22页

作者： Alan j.L.Phillips Kevin D.hyde Artur Alves jian-Kui(jack)Liu Faculdade de Ciencias Biosystems and Integrative Sciences Institute(BioISI)Universidade de LisboaCampo Grande1749-016 LisbonPortugal Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand Departamento de Biologia CESAMUniversidade de Aveiro3810-193 AveiroPortugal Guizhou Institute of Biotechnology Guizhou Academy of Agricultural SciencesGuiyang 550006People’s Republic of China

Botryosphaeriales was introduced in 2006 for a single family *** then the number of families has increased as a result of the transfer of one family(Planistromellaceae)into the order,re-instatement of another(Phyllostictaceae),while others resulted from raising genera to family status(Aplosporellaceae,Endomelanconiopsisaceae,Melanopsaceae,Pseudofusicoccumaceae,Saccharataceae and Septorioideaceae).All these decisions were based solely on phylogenetic analyses of several different *** has been no consensus on which loci are suitable markers at this taxonomic level and in some cases the datasets used to construct the phylogenies were *** this paper,the families of Botryosphaeriales were re-assessed in terms of morphology of the sexual morphs,phylogenetic relationships based on ITS and LSU sequence data,and evolutionary divergence times of lineages in relation to major events in the evolution of their hosts on a geological *** main lineages were resolved in the phylogenetic analyses and these correspond to six groups as defined on morphology of the sexual *** lineages evolved during the Late epoch of the Cretaceous period and survived the catastrophic event that led to the mass extinction of non-avian dinosaurs and a great loss of plant diversity at the end of the Cretaceous *** then diversified during the Paleocene and Eocene epochs of the Paleogene *** six lineages are considered to represent families in ***,six families(Aplosporellaceae,Botryosphaeriaceae,Melanopsaceae,Phyllostictaceae,Planistromellaceae and Saccharataceae)are accepted in Botryosphaeriales,while three(Endomelanconiopsisaceae,Pseudofusicoccumaceae and Septorioideaceae)are reduced to synonymy under existing families.

关键词： Classification Dothideomycetes Evolutionary divergence times Morphology

A review of Entoloma sensu lato(Basidiomycota,Entolomataceae)from Yunnan Province,China

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Studies in Fungi 2020年第1期5卷 526-535页

作者： Ediriweera AN Karunarathna SC Xu j hyde KD RaspéO De Silva NI CAS Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanChina Centre for Mountain Ecosystem Studies Kunming Institute of BotanyChinese Academy of SciencesKunming 650201China Center of Excellence in Fungal Research and School of ScienceMae Fah Luang UniversityChiang Rai 57100Thailand World Agroforestry Centre East and Central Asia132 Lanhei RoadKunming 650201China Department of Biosystems Technology Faculty of TechnologyUniversity of Ruhuna

This review succinctly discusses data on morphology,systematics,ecology and biochemical properties of all the Entoloma species from Yunnan Province,*** also propose directions for future research on ***,8 species of Entoloma have been reported in the present *** sinuatum and *** showed the most contrasting variation in colour and size of the basidiomes while *** and *** were found to display wide variations in spore *** species are saprotrophic except *** and *** which form mycorrhizal *** on biochemical and other chemical attributes of the genus are minimal although such details would help for better utilization of the genus.

关键词： Checklist Ecology macrofungi morphology phylogeny

Valsaria and the Valsariales

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Fungal Diversity 2015年第4期73卷 159-202页

作者： W.M.jaklitsch j.Fournier D.Q.Dai K.D.hyde H.Voglmayr Division of Systematic and Evolutionary Botany Department of Botany and Biodiversity ResearchUniversity of ViennaRennweg 141030 WienAustria Institute of Forest Entomology Forest Pathology and Forest ProtectionDepartment of Forest and Soil SciencesBOKUUniversity of Natural Resources and Life SciencesHasenauerstraße 381190 ViennaAustria Las Muros 09420 RimontFrance Institute of Excellence in Fungal Research and School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand

More than 100 recent collections of Valsaria sensu lato mostly from Europe were used to elucidate the species composition within the *** phylogeny based on SSU,LSU,ITS,rpb2 and tef1 sequences revealed a monophyletic group of ten species within the Dothideomycetes,belonging to three morphologically similar *** group could not be accommodated in any known family and are thus classified in the new family Valsariaceae and the new order *** genus Valsaria sensu stricto comprises ***,***,***,***,*** *** *** ***.,which are phylogenetically well-defined,but morphologically nearly indistinguishable *** new monotypic genus Bambusaria is introduced to accommodate Valsaria *** rubra and Valsaria fulvopruinata are combined in Myrmaecium,a genus traditionally treated as a synonym of Valsaria,which comprises three species,with *** as its generic *** work is presented as a basis for additional species to be detected in future.

关键词： Ascomycota Dothideomycetes Multigene phylogenetic analysis Pyrenomycetes

Trichomeriaceae, a new sooty mould family of Chaetothyriales

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Fungal Diversity 2012年第5期56卷 63-76页

作者： Putarak Chomnunti D.j.Bhat E.B.Gareth jones Ekachai Chukeatirote Ali H.Bahkali Kevin D.hyde International Fungal Research and Development Centre The Research Institute of Resource InsectsChinese Academy of ForestryBailongsiKunmingYunnanPeople’s Republic of China 650224 Institute of Excellence in Fungal Research School of ScienceMae Fah Luang UniversityChiang Rai 57100Thailand School of Science Mae Fah Luang UniversityChiang Rai 57100Thailand Institute of Ocean and Earth Sciences(IOES) C308Institute of Postgraduate Studies BuildingUniversity of Malaya50603Kuala LumpurMalaysia College of Science Botany and Microbiology DepartmentKing Saud UniversityRiyadh 1145Saudi Arabia

Trichomerium is a genus of foliar epiphytes with the appearance of sooty moulds,mostly occurring on the surface of living leaves and apparently gaining their nutrients from insect *** have ascostromata with setae and develop on a loosely interwoven mycelial mass of dark brown hyphae,while asci have a bitunicate appearance with hyaline *** this study,we made 16 collections of Trichomerium from *** were isolated,and the LSU and ITS rDNA gene regions *** analysis indicated that the Trichomerium species form a monophyletic clade within Chaetothyriales and warrant the introduction of a new family *** support for the Chaetothyriales is 100%and clearly separates Trichomeriaceae from Capnodiales which are morphologically very similar.A detailed account of Trichomerium is provided and we describe and illustrate three new species based on morphological and molecular *** propose that *** is adopted as the generic type of Trichomerium because it has been impossible to obtain the holotype specimen of *** and also no molecular data exists in worldwide databases for this species or genus.

关键词： Foliar epiphytes Phylogeny Sooty moulds Trichomerium

First successful domestication of a white strain of Auricularia cornea from Thailand

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Studies in Fungi 2020年第1期5卷 420-434页

作者： Bandara AR Mortimer PE Vadthanarat S Xingrong P Karunarathna SC hyde KD Kakumyan P Xu j CAS Key Laboratory for Plant Diversity and Biogeography of East Asia Kunming Institute of BotanyChinese Academy of SciencesKunming 650201YunnanChina Centre for Mountain Futures Kunming Institute of BotanyKunming 650201YunnanChina Center of Excellence in Fungal Research Mae Fah Luang UniversityChiang Rai 57100Thailand School of science Mae Fah Luang UniversityChiang Rai 57100Thailand Department of Biology Faculty of ScienceChiang Mai UniversityChiang Mai 50200Thailand World Agroforestry Centre East and Central AsiaKunming 650201YunnanChina

Intraspecies colour variations in cultivated edible mushrooms present novel and potentially valuable alternatives to the research and cultivation *** this study,we collected,identified,and domesticated a white strain of Auricularia cornea from *** brown strain of *** is one of the top two species of Auricularia cultivated and traded in *** both white and brown phenotypes of *** belong to a single species,we established their similarities or *** morphological characteristics and phylogenetic analysis of ITS rDNA sequence data were used to confirm the taxonomic placement of the white *** strain in the same clade with the brown *** analysis showed that fat,fiber,protein,and total soluble sugar contents of the white *** were significantly higher than the commercially used brown *** melanin content of the white strain of ***(less than 1.5 mg/100g)was not significantly different from that of the brown *** discovery may create new opportunities for the mushroom growing industry and for smallholder farmers in Asia.

关键词： colour variation Melanin Southeast Asia wood-ear mushrooms