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Do tensile and shear forces exerted on cells influence mechanotransduction through stored energy considerations?

BIOcELL 2024年第4期48卷 525-540页

作者： FREDERIcK h.SILVER TANMAY DEShMUKh Department of Pathology and Laboratory Medicine Robert Wood Johnson Medical SchoolRutgersThe State University of New JerseyPiscatawayNJ 08854USA OptoVibronex LLC.Ben Franklin Tech PartnersBethlehemPA 18015USA

All tissues in the body are subjected externally to gravity and internally by collagenﬁbril and cellular retractive forces that create stress and energy equilibrium required for *** involves mechanical work(force through a distance)and energy storage as kinetic and potential *** leads to changes in cell mitosis or apoptosis and the synthesis or loss of tissue *** involves the application of energy directly to cells through integrin-mediated processes,cell-cell connections,stretching of the cell cytoplasm,and activation of the cell nucleus via yes-associated protein(YAP)and transcriptional coactivator with PDZ-motif(TAZ).These processes involve numerous complexes,intermediate molecules,and multiple *** pathways have been identiﬁed from research studies on vertebrate cell culture and from studies in *** pathways involve mechanosensors and other molecules that activate the *** review discusses the mitogen-activated protein kinase(MAPK)family,hippo,hedgehog,and Wingless-related integration site(WNT)/βcatenin signaling *** mediators covered includeβcatenin,ion channels,growth factors,hormone receptors,members of the Ras superfamily,and components of the linker of nucleoskeleton and cytoskeleton(LINc)***,the interrelationship among the different pathways remains to be clariﬁ***-mediated mechanotransduction involves direct tensile loading and energy applied to the cell membrane via collagenﬁbril *** energy is transferred between cells by stretching the cell-cell connections involving cadherins and the WNT/βcatenin *** alterations induce changes in intracellular events in the cytoskeleton and nuclear skeleton caused by the release of YAP and *** coactivators then penetrate through the nuclear pores and inﬂuence nuclear cell *** in the balance of forces and energy applied to cells and tissues is hypothesized to shift th

关键词： MAPK family hippo hedgehog WNT pathway βcatenin Ion channels Growth factor receptors hormone receptors Ras superfamily LINc complex collagen cadherins

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Neurological consequences of human calmodulin mutations

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Neural Regeneration Research 2024年第5期19卷 943-944页

作者： helene h.Jensen Anders Olsen Medical Biotechnology Department of Chemistry and BiosciencesAalborg UniversityAalborgDenmark

When calcium ions enter the cytosol,it is a stimulatory signal for cellular *** calcium sensor calmodulin picks up the change in calcium concentration and relays this information to its more than 300 downstream interaction *** this way,calmodulin affects cellular processes such as fertilization,muscle contraction,neuronal firing,and *** is,calmodulin is involved in(nearly)everything!The significance of calmodulin is emphasized by the fact that we all carry three different genes(cALM1,2,3)on different chromosomes that encode the exact same calmodulin protein,and these are all expressed in all cell ***,throughout vertebrate evolution,the protein sequence has remained completely unchanged.

关键词： consequences unchanged calmodulin

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Evidence for particle acceleration approaching PeV energies in the W51 complex

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Science Bulletin 2024年第18期69卷 2833-2841页

作者： cao, Zhen Aharonian, F. Axikegu Bai, Y.X. Bao, Y.W. Bastieri, D. Bi, X.J. Bi, Y.J. Bian, W. Bukevich, A.V. cao, Q. cao, W.Y. cao, Zhe chang, J. chang, J.F. chen, A.M. chen, E.S. chen, h.X. chen, Liang chen, Lin chen, Long chen, M.J. chen, M.L. chen, Q.h. chen, S. chen, S.h. chen, S.Z. chen, T.L. chen, Y. cheng, N. cheng, Y.D. cui, M.Y. cui, S.W. cui, X.h. cui, Y.D. Dai, B.Z. Dai, h.L. Dai, Z.G. Danzengluobu Dong, X.Q. Duan, K.K. Fan, J.h. Fan, Y.Z. Fang, J. Fang, J.h. Fang, K. Feng, c.F. Feng, h. Feng, L. Feng, S.h. Feng, X.T. Feng, Y. Feng, Y.L. Gabici, S. Gao, B. Gao, c.D. Gao, Q. Gao, W. Gao, W.K. Ge, M.M. Geng, L.S. Giacinti, G. Gong, G.h. Gou, Q.B. Gu, M.h. Guo, F.L. Guo, X.L. Guo, Y.Q. Guo, Y.Y. han, Y.A. hasan, M. he, h.h. he, h.N. he, J.Y. he, Y. hor, Y.K. hou, B.W. hou, c. hou, X. hu, h.B. hu, Q. hu, S.c. huang, D.h. huang, T.Q. huang, W.J. huang, X.T. huang, X.Y. huang, Y. Ji, X.L. Jia, h.Y. Jia, K. Jiang, K. Jiang, X.W. Jiang, Z.J. Jin, M. Kang, M.M. Karpikov, I. Kuleshov, D. Kurinov, K. Li, B.B. Li, c.M. Li, cheng Li, cong Li, D. Li, F. Li, h.B. Li, h.c. Li, Jian Li, Jie Li, K. Li, S.D. Li, W.L. Li, X.R. Li, Xin Li, Y.Z. Li, Zhe Li, Zhuo Liang, E.W. Liang, Y.F. Lin, S.J. Liu, B. Liu, c. Liu, D. Liu, D.B. Liu, h. Liu, h.D. Liu, J. Liu, J.L. Liu, M.Y. Liu, R.Y. Liu, S.M. Liu, W. Liu, Y. Liu, Y.N. Luo, Q. Luo, Y. Lv, h.K. Ma, B.Q. Ma, L.L. Ma, X.h. Mao, J.R. Min, Z. Mitthumsiri, W. Mu, h.J. Nan, Y.c. Neronov, A. Ou, L.J. Pattarakijwanich, P. Pei, Z.Y. Qi, J.c. Qi, M.Y. Qiao, B.Q. Qin, J.J. Raza, A. Ruffolo, D. Sáiz, A. Saeed, M. Semikoz, D. Shao, L. Shchegolev, O. Sheng, X.D. Shu, F.W. Song, h.c. Stenkin, Yu.V. Stepanov, V. Su, Y. Sun, D.X. Sun, Q.N. Sun, X.N. Sun, Z.B. Takata, J. Tam, P.h.T. Key Laboratory of Particle Astrophysics & Experimental Physics Division & computing center Institute of High Energy Physics Chinese Academy of Sciences Beijing 100049 China University of chinese Academy of Sciences Beijing 100049 China TIANFU cosmic Ray Research center Chengdu China Dublin Institute for Advanced Studies 31 Fitzwilliam Place 2 Dublin Ireland Max-Planck-Institut for Nuclear Physics P.O. Box 103980 Heidelberg 69029 Germany School of Physical Science and Technology & School of Information Science and Technology Southwest Jiaotong University Chengdu 610031 China School of Astronomy and Space Science Nanjing University Nanjing 210023 China center for Astrophysics Guangzhou University Guangzhou 510006 China Tsung-Dao Lee Institute & School of Physics and Astronomy Shanghai Jiao Tong University Shanghai 200240 China Institute for Nuclear Research of Russian Academy of Sciences Moscow 117312 Russia hebei Normal University Shijiazhuang 050024 China University of Science and Technology of china Hefei 230026 China State Key Laboratory of Particle Detection and Electronics China Key Laboratory of Dark Matter and Space Astronomy & Key Laboratory of Radio Astronomy Purple Mountain Observatory Chinese Academy of Sciences Nanjing 210023 China Research center for Astronomical computing Zhejiang Laboratory Hangzhou 311121 China Key Laboratory for Research in Galaxies and cosmology Shanghai Astronomical Observatory Chinese Academy of Sciences Shanghai 200030 China School of Physics and Astronomy Yunnan University Kunming 650091 China Key Laboratory of cosmic Rays (Tibet University) Ministry of Education Lhasa 850000 China National Astronomical Observatories Chinese Academy of Sciences Beijing 100101 China School of Physics and Astronomy (Zhuhai) & School of Physics (Guangzhou) & Sino-French Institute of Nuclear Engineering and Technology (Zhuhai) Sun Yat-sen University Zhuhai 519000 & Guangzhou 510275 Guangdong China Institute of Frontier and

The γ-ray emission from the W51 complex is widely acknowledged to be attributed to the interaction between the cosmic rays (cRs) accelerated by the shock of supernova remnant (SNR) W51c and the dense molecular clouds in the adjacent star-forming region, W51B. however, the maximum acceleration capability of W51c for cRs remains elusive. Based on observations conducted with the Large high Altitude Air Shower Observatory (LhAASO), we report a significant detection of γ rays emanating from the W51 complex, with energies from 2 to 200 TeV. The LhAASO measurements, for the first time, extend the γ-ray emission from the W51 complex beyond 100 TeV and reveal a significant spectrum bending at tens of TeV. By combining the "π0-decay bump" featured data from Fermi-LAT, the broadband γ-ray spectrum of the W51 region can be well-characterized by a simple pp-collision model. The observed spectral bending feature suggests an exponential cutoff at ∼400 TeV or a power-law break at ∼200 TeV in the cR proton spectrum, most likely providing the first evidence of SNRs serving as cR accelerators approaching the PeV regime. Additionally, two young star clusters within W51B could also be theoretically viable to produce the most energetic γ rays observed by LhAASO. Our findings strongly support the presence of extreme cR accelerators within the W51 complex and provide new insights into the origin of Galactic cRs. © 2024 Science china Press

关键词： cosmic rays

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B-cell and antibody responses to SARS-coV-2:infection,vaccination,and hybrid immunity

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cellular & Molecular Immunology 2024年第2期21卷 144-158页

作者： Dennis Lapuente Thomas h.Winkler Matthias Tenbusch Institut für klinische und molekulare Virologie Universitätsklinikum Erlangen und Friedrich-Alexander-Universität(FAU)Erlangen-NürnbergSchlossgarten 491054 ErlangenGermany Department of Biology Division of GeneticsNikolaus-Fiebiger-Center for Molecular MedicineFriedrich-Alexander-Universität Erlangen-Nürnberg(FAU)ErlangenGermany Medical Immunology campus Erlangen Friedrich-Alexander-Universität(FAU)Erlangen-NürnbergSchlossplatz 191054 ErlangenGermany

The emergence of severe acute respiratory syndrome coronavirus 2(SARS-coV-2)in 2019 prompted scientific,medical,and biotech communities to investigate infection-and vaccine-induced immune responses in the context of this pathogen.B-cell and antibody responses are at the center of these investigations,as neutralizing antibodies(nAbs)are an important correlate of protection(cOP)from infection and the primary target of SARS-coV-2 vaccine *** addition to absolute levels,nAb longevity,neutralization breadth,immunoglobulin isotype and subtype composition,and presence at mucosal sites have become important topics for scientists and health policy *** recent pandemic was and still is a unique setting in which to study de novo and memory B-cell(MBc)and antibody responses in the dynamic interplay of infection-and vaccine-induced *** also provided an opportunity to explore new vaccine platforms,such as mRNA or adenoviral vector vaccines,in unprecedented cohort *** with the technological advances of recent years,this situation has provided detailed mechanistic insights into the development of B-cell and antibody responses but also revealed some unexpected *** this review,we summarize the key findings of the last 2.5 years regarding infection-and vaccine-induced B-cell immunity,which we believe are of significant value not only in the context of SARS-coV-2 but also for future vaccination approaches in endemic and pandemic settings.

关键词： SARS-coV-2 neutralizing antibodies memory responses vaccines IgG4

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Efficient Vision Transformers for Autonomous Off-Road Perception Systems

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Journal of computer and communications 2024年第9期12卷 188-207页

作者： Max h. Faykus III Adam Pickeral Ethan Marquez Melissa c. Smith Jon c. calhoun holcombe Department of Electrical and computer Engineering Clemson University Clemson SC USA

The development of autonomous vehicles has become one of the greatest research endeavors in recent years. These vehicles rely on many complex systems working in tandem to make decisions. For practical use and safety reasons, these systems must not only be accurate, but also quickly detect changes in the surrounding environment. In autonomous vehicle research, the environment perception system is one of the key components of development. Environment perception systems allow the vehicle to understand its surroundings. This is done by using cameras, light detection and ranging (LiDAR), with other sensor systems and modalities. Deep learning computer vision algorithms have been shown to be the strongest tool for translating camera data into accurate and safe traversability decisions regarding the environment surrounding a vehicle. In order for a vehicle to safely traverse an area in real time, these computer vision algorithms must be accurate and have low latency. While much research has studied autonomous driving for traversing well-structured urban environments, limited research exists evaluating perception system improvements in off-road settings. This research aims to investigate the adaptability of several existing deep-learning architectures for semantic segmentation in off-road environments. Previous studies of two convolutional Neural Network (cNN) architectures are included for comparison with new evaluation of Vision Transformer (ViT) architectures for semantic segmentation. Our results demonstrate viability of ViT architectures for off-road perception systems, having a strong segmentation accuracy, lower inference speed and memory footprint compared to previous results with cNN architectures.

关键词： Semantic Segmentation Off-Road Vision Transformers cNNs Autonomous Driving

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Genome-wide Studies Reveal Genetic Risk Factors for hepatic Fat content

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GENOMIcS PROTEOMIcS & BIOINFORMATIcS 2024年第2期22卷 qzae031页

作者： Li, Yanni van den Berg, Eline h. Kurilshikov, Alexander Zhernakova, Dasha, V Gacesa, Ranko hu, Shixian Lopera-Maya, Esteban A. Zhernakova, Alexandra de Meijer, Vincent E. Sanna, Serena Dullaart, Robin P. F. Blokzijl, hans Festen, Eleonora A. M. Fu, Jingyuan Weersma, Rinse K. Univ Groningen Univ Med Ctr Groningen Dept Gastroenterol & Hepatol NL-9713 GZ Groningen Netherlands Univ Groningen Univ Med Ctr Groningen Dept Genet NL-9713 GZ Groningen Netherlands Tianjin Med Univ Tianjin Med Univ Gen Hosp Dept Gastroenterol & Hepatol Tianjin 300052 Peoples R China Sun Yat Sen Univ Affiliated Hosp 1 Inst Precis Med Guangzhou 510080 Peoples R China ITMO Univ Ctr Comp Technol Lab Genom Divers St Petersburg 199034 Russia Univ Groningen Univ Med Ctr Groningen Dept Pediat NL-9713 GZ Groningen Netherlands Univ Groningen Univ Med Ctr Groningen Dept Surg Sect Hepatobiliary Surg & Liver Transplantat NL-9713 GZ Groningen Netherlands Univ Groningen Univ Med Ctr Groningen Dept Endocrinol NL-9713 GZ Groningen Netherlands

Genetic susceptibility to metabolic associated fatty liver disease (MAFLD) is complex and poorly characterized. Accurate characterization of the genetic background of hepatic fat content would provide insights into disease etiology and causality of risk factors. We performed genome-wide association study (GWAS) on two noninvasive definitions of hepatic fat content: magnetic resonance imaging proton density fat fraction (MRI-PDFF) in 16,050 participants and fatty liver index (FLI) in 388,701 participants from the United Kingdom (UK) Biobank (UKBB). heritability, genetic overlap, and similarity between hepatic fat content phenotypes were analyzed, and replicated in 10,398 participants from the University Medical center Groningen (UMcG) Genetics Lifelines Initiative (UGLI). Meta-analysis of GWASs of MRI-PDFF in UKBB revealed five statistically significant loci, including two novel genomic loci harboring cREB3L1 (rs72910057-T, P = 5.40E-09) and GcM1 (rs1491489378-T, P = 3.16E-09), respectively, as well as three previously reported loci: PNPLA3, TM6SF2, and APOE. GWAS of FLI in UKBB identified 196 genome-wide significant loci, of which 49 were replicated in UGLI, with top signals in ZPR1 (P = 3.35E-13) and FTO (P = 2.11E-09). Statistically significant genetic correlation (rg) between MRI-PDFF (UKBB) and FLI (UGLI) GWAS results was found (rg = 0.5276, P = 1.45E-03). Novel MRI-PDFF genetic signals (cREB3L1 and GcM1) were replicated in the FLI GWAS. We identified two novel genes for MRI-PDFF and 49 replicable loci for FLI. Despite a difference in hepatic fat content assessment between MRI-PDFF and FLI, a substantial similar genetic architecture was found. FLI is identified as an easy and reliable approach to study hepatic fat content at the population level.

关键词： hepatic fat content MAFLD Genome-wide association study Fatty liver index Magnetic resonance imaging proton density fat fraction LIVER-DISEASE ASSOcIATION VARIANT LOcI SUScEPTIBILITY PAThOGENESIS INSIGhTS TARGETS ENZYMES cONFERS

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Gut microbial regulation of innate and adaptive immunity after traumatic brain injury

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Neural Regeneration Research 2024年第2期19卷 272-276页

作者： Marta celorrio Kirill Shumilov Stuart h.Friess Department of Pediatrics Washington University in St.Louis School of MedicineSt.LouisMOUSA

Acute care management of traumatic brain injury is focused on the prevention and reduction of secondary insults such as hypotension,hypoxia,intracranial hypertension,and detrimental ***,the imperative to balance multiple clinical concerns simultaneously often results in therapeutic strategies targeted to address one clinical concern causing unintended effects in other remote organ *** the bidirectional communication between the gastrointestinal tract and the brain has been shown to influence both the central nervous system and gastrointestinal tract homeostasis in health and disease.A critical component of this axis is the microorganisms of the gut known as the gut *** in gut microbial populations in the setting of central nervous system disease,including traumatic brain injury,have been reported in both humans and experimental animal models and can be further disrupted by off-target effects of patient *** this review article,we will explore the important role gut microbial populations play in regulating brain-resident and peripheral immune cell responses after traumatic brain *** will discuss the role of bacterial metabolites in gut microbial regulation of neuroinflammation and their potential as an avenue for therapeutic intervention in the setting of traumatic brain injury.

关键词： gut microbiome gut microbiota gut-brain axis macrophage microglia monocyte neuroinflammation short-chain fatty acids T cell traumatic brain injury

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Enhancing Log Anomaly Detection with Semantic Embedding and Integrated Neural Network Innovations

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computers, Materials and continua 2024年第3期80卷 3991-4015页

作者： Xu Z. Wang Z. Xu J. Shi h. Zhao h. School of computer and Software Nanjing University of Information Science and Technology Nanjing 210044 China

System logs, serving as a pivotal data source for performance monitoring and anomaly detection, play an indispensable role in assuring service stability and reliability. Despite this, the majority of existing log-based anomaly detection methodologies predominantly depend on the sequence or quantity attributes of logs, utilizing solely a single Recurrent Neural Network (RNN) and its variant sequence models for detection. These approaches have not thoroughly exploited the semantic information embedded in logs, exhibit limited adaptability to novel logs, and a single model struggles to fully unearth the potential features within the log sequence. Addressing these challenges, this article proposes a hybrid architecture based on a multiscale convolutional neural network, efficient channel attention and mogrifier gated recurrent unit networks (LogcEM), which amalgamates multiple neural network technologies. capitalizing on the superior performance of robustly optimized BERT approach (RoBERTa) in the realm of natural language processing, we employ RoBERTa to extract the original word vectors from each word in the log template. In conjunction with the enhanced Smooth Inverse Frequency (SIF) algorithm, we generate more precise log sentence vectors, thereby achieving an in-depth representation of log semantics. Subsequently, these log vector sequences are fed into a hybrid neural network, which fuses 1D Multi-Scale convolutional Neural Network (MScNN), Efficient channel Attention Mechanism (EcA), and Mogrifier Gated Recurrent Unit (GRU). This amalgamation enables the model to concurrently capture the local and global dependencies of the log sequence and autonomously learn the significance of different log sequences, thereby markedly enhancing the efficacy of log anomaly detection. To validate the effectiveness of the LogcEM model, we conducted evaluations on two authoritative open-source datasets. The experimental results demonstrate that LogcEM not only exhibits excellent ac

关键词： anomaly detection Deep learning log analysis natural language processing

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A facile strategy for tuning the density of surface-grafted biomolecules for melt extrusion-based additive manufacturing applications

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Bio-Design and Manufacturing 2024年第3期7卷 277-291页

作者： I.A.O.Beeren G.Dos Santos P.J.Dijkstra c.Mota J.Bauer h.Ferreira Rui L.Reis N.Neves S.camarero-Espinosa M.B.Baker L.Moroni Department of complex Tissue Regeneration MERLN Institute for Technology-Inspired Regenerative MedicineMaastricht University6229 ER MaastrichtThe Netherlands 3B’s Research Group I3Bs–Research Institute on BiomaterialsBiodegradables and BiomimeticsHeadquarters of the European Institute of Excellence on Tissue Engineering and Regenerative MedicineUniversity of MinhoAveParkZona Industrial da Gandra4805-017 BarcoGuimarãesPortugal IcVS/3B’s-PT Government Associate Laboratory 4806-909 Braga/GuimarãesPortugal POLYMAT University of the Basque Country UPV/EHU20018 Donostia/San SebastiánSpain IKERBASQUE Basque Foundation for Science48009 BilbaoSpain

Melt extrusion-based additive manufacturing(ME-AM)is a promising technique to fabricate porous scaffolds for tissue engi-neering ***,most synthetic semicrystalline polymers do not possess the intrinsic biological activity required to control cell *** of biomolecules on polymeric surfaces of AM scaffolds enhances the bioactivity of a construct;however,there are limited strategies available to control the surface ***,we report a strategy to tune the surface density of bioactive groups by blending a low molecular weight poly(ε-caprolactone)5k(PcL5k)containing orthogonally reactive azide groups with an unfunctionalized high molecular weight PcL75k at different *** porous three-dimensional(3D)scaf-folds were then fabricated using a high weight percentage(75 wt.%)of the low molecular weight PcL *** a proof-of-concept test,we prepared films of three different mass ratios of low and high molecular weight polymers with a thermopress and reacted with an alkynated fluorescent model compound on the surface,yielding a density of 201-561 pmol/cm^(2).Subsequently,a bone morphogenetic protein 2(BMP-2)-derived peptide was grafted onto the films comprising different blend compositions,and the effect of peptide surface density on the osteogenic differentiation of human mesenchymal stromal cells(hMScs)was *** two weeks of culturing in a basic medium,cells expressed higher levels of BMP receptor II(BMPRII)on films with the conjugated *** addition,we found that alkaline phosphatase activity was only significantly enhanced on films contain-ing the highest peptide density(i.e.,561 pmol/cm^(2)),indicating the importance of the surface *** together,these results emphasize that the density of surface peptides on cell differentiation must be considered at the cell-material ***,we have presented a viable strategy for ME-AM community that desires to tune the bulk and surface functionality via blending of(m

关键词： Additive manufacturing Blending Surface functionalization Surface density click chemistry human

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Location of Asymmetric Ground Fault Using Virtual Injected current Ratio and Two-stage Recovery Strategy in Distribution Networks

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cSEE Journal of Power and Energy Systems 2024年第1期10卷 151-161页

作者： haiting Shan Luliang Zhang Q.h.Wu Mengshi Li School of Electric Power Engineering South China University of Technology(SCUT)Guangzhou 510641China

Sparse measurements challenge fault location in distribution *** paper proposes a method for asymmetric ground fault location in distribution networks with limited measurements.A virtual injected current vector is formulated to estimate the fault line,which can be reconstructed from voltage sags measured at a few buses using compressive sensing(cS).The relationship between the virtual injected current ratio(VIcR)and fault position is deduced from circuit analysis to pinpoint the ***,a two-stage recovery strategy is proposed for improving reconstruction accuracy of the current vector,where two different sensing matrixes are utilized to improve the *** proposed method is validated in IEEE 34 node test *** results show asymmetric ground fault type,resistance,fault position and access of distributed generators(DGs)do not significantly influence performance of our *** addition,it works effectively under various scenarios of noisy measurement and line parameter *** on 134 node test feeders prove the proposed method is also suitable for systems with more complex structure.

关键词： Distribution networks fault location reconstruction accuracy two-stage recovery virtual injected current ratio

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