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Discovery of immune related factors in Fenneropenaeus chinensis by annotation of ESTs

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Progress in Natural Science:Materials International 2004年第1期14卷 48-55页

作者： SHEN Yaoqing 1,2. , XIANG Jianhai 1*, WANG Bing 1,2. , LI Fuhua 1 and TONG Wei 3.1. Experimental Marine Biology Laboratory, Institute of Oceanology, Chinese Academy of sciences, Qingdao 2.6071,china 2. {2. school of the Chinese Academy of sciences, Beijing 10003., china 3. Genomics & Bioinformatics Institute, Chinese Academy of sciences, Beijing 1013.0, china) Chinese Acad Sci Inst Oceanol Expt Marine Biol Lab Qingdao 266071 Peoples R China Chinese Acad Sci Grad Sch Beijing 100039 Peoples R China Chinese Acad Sci Geonom & Bioinformat Inst Beijing 101300 Peoples R China

A total of 104.6 expressed sequence tags (ESTs) are obtained by a large scale sequencing of a cDNA library from cephalothorax of adult Fenneropenaeus chinensis . An EST analysis platform was built up based on local computers and bioinformatic techniques were used to annotate these ESTs in order to promptly find possible functional genes, especially for immune related factors. About 4. of the ESTs show similarity to the coding sequences of such factors, including lectin, serine protease, serpin, lysozyme, etc. These ESTs provide a partial profile of the immune system in F. chinensis and useful information for further study on these genes.

关键词： Fenneropenaeus chinensis bioinformatics ESTs immune factors

The onset and advance of the Asian summer monsoon

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Science Bulletin 2006年第1期51卷 80-88页

作者： Lü Junmei1,2.4. ZHANG Qingyun1, TAO Shiyan1 & JU Jianhua3.1. State Key Laboratory of Numerical Modeling for Atmospheric Sci- ences and Geophysical Fluid Dynamics, Institute of Atmospheric Physics, Chinese Academy of sciences, Beijing 10002.,{3. 2. Department of Atmospheric sciences, Yunnan University, Kunming 650091,{3. 3.{3. Meteorological Administration Training Centre, Beijing 100081,{3. 4. graduate school of Chinese Academy of sciences, Beijing {14.,{3. State Key Laboratory of Numerical Modeling for Atmospheric sciences and Geophysical Fluid Dynamics Institute of Atmospheric Physics Chinese Academy of Sciences Beijing 100029 China Department of Atmospheric sciences Yunnan University Kunming 650091 China graduate school of Chinese Academy of {2. Beijing 100039 China china Meteorological Administration Training Centre Beijing 100081 China

Based on the daily outgoing longwave radiation (OLR) data from National Oceanic and At- mospheric Administration (NOAA) satellites, the Cli- mate Prediction Center’s merged analysis of pre- cipitation (CMAP) data and the National Centers for Environmental Prediction/National Center for At- mospheric Research (NCEP/NCAR) reanalysis dataset, the mean intraseasonal variability of the Asian summer monsoon (ASM) is investigated by using power spectrum analysis, band-pass filter, and diagnostic analyses. The processes of the onset and advance of monsoon over the southern part of Indo- china Peninsula, the east coast of Bay of Bengal, the South china Sea and the Indian subcontinent are explored. It is found that there is an abrupt change in OLR, precipitation and zonal wind during the onset and advance of the ASM. It is also indicated that the southern part of Indo{2. Peninsula and the adja- cent Andaman Sea is the region where the earliest onset of the ASM occurs in the 2.d pentad of May.

关键词： Asian summer monsoon intraseasonal variability onset advance.

Isotopic feature and uranium dating of the volcanic rocks in the Okinawa Trough

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中国科学：地球科学英文版 2006年第4期49卷 375-383页

作者： HUANG Peng1,2. LI Anchun1, HU Ningjing2.3. FU Yongtao1& MA Zhibang4.1. Institute of Oceanology, Chinese Academy of sciences, Qingdao 2.6071, china 2. {2. school of the Chinese Academy of sciences, Beijing 10003., china 3. Institute of Soil Science, Chinese Academy of sciences, Nanjing 2.0008, china 4. Institute of Geology and Geophysics, Chinese Academy of sciences, Beijing 10002., china 1. Institute of Oceanology Chinese Academy of Sciences Qingdao 266071 China 2. graduate school of the Chinese Academy of {2. Beijing 100039 China 3. Institute of Soil Science Chinese Academy of Sciences Nanjing 210008 China 4. Institute of Geology and Geophysics Chinese Academy of Sciences Beijing 100029 China

Volcanic rocks from the northern and middle Okinawa Trough were dated by ura- nium-series dating method. Differential fractions using magnetic procedure were designed to separate samples. New report on the ages and isotopic data of rocks in the northern trough (especially black pumice) was discussed. Based on the uranium dates and Sr-Nd isotopic ratio, magmatic evolution process of the Okinawa Trough was noted. Firstly, there have been wide silicic volcanic activities in the Okinawa Trough from late Pleistocene to present, and the volcanic rocks can be divided into three subgroups. Secondly, magma generally came from PREMA source area under the Okinawa Trough. Magmatic evolution in the northern trough was similar to the middle, but different to the south. Finally, volcanic activities indicated that opening of the southern Okinawa Trough did not happen due to the collision between Luson Arc and Eurasian Plate until the early Pleistocene.

关键词： Okinawa Trough, black pumice, uranium-series dating, Sr-Nd isotopic ratio, magmatic evolution.

Representation of microscale ocean wavenumber spectrum correct to the second order

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Science china Earth sciences 2005年第4期48卷 549-554页

作者： YUAN Yeli2.& HUA Feng1,2.3.1. Institute of Oceanology, Chinese Academy of sciences, Qingdao 2.6071, china 2. Key Laboratory of Marine Science and Numerical Modeling, State Oceanic Administration, Qingdao 2.6061, china 3. graduate school of the Chinese Academy of sciences, Beijing 10003., china 1. Key Laboratory of Marine Science and Numerical Modeling State Oceanic Administration 266061 Qingdao China 2. Institute of Oceanology Chinese Academy of Sciences 266071 Qingdao China 3. graduate school of the Chinese Academy of {2. 100039 Beijing China

In this paper, the analytical representations of four wave source functions in high-frequency spectrum range are given on the basis of ocean wave theory and dimensional analysis, and the perturbation method is used to solve the governing equations of ocean wave high-frequency spectrum on the basis of the temporally stationary and locally homogeneous scale relations of microscale wave. The microscale ocean wavenumber spectrum correct to the second order has an explicit structure, its first order part represents the equilibrium between dif- ferent source functions, and its second order part represents the contribution of microscale wave propagation.

关键词： temporally stationary and locally homogeneous, source function in high-frequency spectrum range, microscale ocean wavenumber spectrum.

Spatial heterogeneity of the driving forces of cropland change in china

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Science china Earth sciences 2005年第12期48卷 2231-2240页

作者： LIU Xuhua1,2. WANG Jinfeng1, LIU Mingliang4.1 & MENG Bin1,2.3.1. Institute of Geographic sciences and Natural Resources Research, Chinese Academy of sciences, Beijing 100101,{2. 2. graduate school of the Chinese Academy of sciences, Beijing 10003.,{2. 3. College of Arts and sciences of Beijing Union University, Beijing 100083.{2. 4. school of Forestry and Wildlife sciences, Auburn University, Auburn, Alabama, AL3.84., USA 1. Institute of Geographic sciences and Natural Resources Research Chinese Academy of Sciences 100101 Beijing China 2. graduate school of the Chinese Academy of {2. 100039 Beijing China 3. school of Forestry and Wildlife sciences Auburn University Auburn AL36849 Alabama USA 4. College of Arts and sciences of Beijing Union University 100083 Beijing China

By using digital satellite remote sensing data acquired in 1987―1989 and 1999―2.00 and GIS combined with the natural and socio-economic data, this paper drew an integrated zonation of the cropland change and its driving forces in china. The results indicated that the cropland change in the study period was constrained by geographical factors and driven by cli-mate change as well as socio-economic system. Moreover, the regional differences of the drivers for cropland change were significant. In the midwest of china, natural condition changes and geographical background were the main constraints and drivers, while in Eastern china, social and economic changes and economic policies were the main driving forces. The cropland loss was nationwide. The dominant factors to cause this decrease included buildup of developing area to attract foreign capital and technologies, changes of industry structure due to urban in-fluence, the change of employment notions thanks to living standard improvement, rapid ur-banization due to the expansion of cities and towns, the diminished farming net income partly because of the global warming effects, and the rapid economic growth stimulated by the con-venient transportation system. These factors interact and interdepend with each other to cause the cropland loss in china recently. The reasons for the increase of cropland were primarily the cultivation and deforestation by the farmers who want to increase income. This study on the mechnism of LUCC relied on the cropland change integrated classification considering the natural or human factors both inside and outside the region, which provides a new approach to study the integrated regionalization and LUCC mechanism.

关键词： land use change, driving force, integrated classification, spatial statistics, cropland, china.

Variation properties of ionospheric eclipse factor and ionospheric influence factor

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Progress in Natural Science:Materials International 2005年第6期15卷 573-576页

作者： ZHAO Chunmei 1,2.*, YUAN Yunbin1, OU Jikun1 and CHEN Jinping3.1. Institute of Geodesy and Geophysics, Chinese Academy of sciences, Wuhan 4.1}077,{4. 2. {2. school of Chinese Academy of sciences, Beijing 10003.,{4. 3. Department of Precision Instrument and Mechanology, Tsinghua University, Beijing 100084.{4.) Institute of Geodesy and Geophysics Chinese Academy of Sciences Wuhan 430077 China graduate school of Chinese Academy of {2. Beijing 100039 China Department of Precision Instrument and Mechanology Tsinghua University Beijing 100084 China

The concepts and calculation methods of ionospheric eclipse factor (IEF) and ionospheric influence factor (IFF) are further illustrated. The temporal and spacial variation properties of IEF and IFF are studied, which shows that the properties are influenced by the geographic position and season. The possibility of improving the precision of using GPS data to determine ionospheric delay based on the above variation properties is also analysed.

关键词： GPS ionospheric eclipse factor ionospheric influence factor

Spectral analysis of quasi-stationary sea surface topography from GRACE mission

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Science china Earth sciences 2005年第11期48卷 2040-2048页

作者： ZHANG Zizhan1,2.& LU Yang1,3.1. Institute of Geodesy and Geophysics, Chinese Academy of sciences, Wuhan 4.1}077,{4. 2. {2. school of the Chinese Academy of sciences, Beijing 10003.,{4. 3. Unite Center for Astro-geodymics Research, Chinese Academy of sciences, Shanghai 2.003.,{4. 1. Institute of Geodesy and Geophysics Chinese Academy of Sciences 430077 Wuhan China 2. graduate school of the Chinese Academy of {2. 100039 Beijing China 3. Unite Center for Astro-geodymics Research Chinese Academy of Sciences 200030 Shanghai China

During the last two decades satellite altimetry has offered an abundance of meas-urements of the sea surface resulting in the improvement of global mean sea surface height (MSSH) and marine geoid determination. On the other hand, with the launching of new genera-tion gravity satellites, some high accuracy long-wavelength gravity models are available. These breakthroughs give us a great opportunity for new estimation of quasi-stationary sea surface topography (QSST). In this paper, the new gravity model GGM01C derived from GRACE mission is briefly presented, and a new global high precision and high-resolution QSST is determined based on the GGM01C model and the global MSSH. The spectral features of the QSST esti-mated by GGM01C and EGM96 gravity model to degree/order 2.0 are discussed by spectral analysis. As a result, the QSST is mainly composed of long waves, medium waves partially and short waves scarcely, its power spectral structures are different between the zonal direction and the meridional direction, there are great differences between the two models, which maybe ex-plain why the ocean currents derived from the two gravity models by Tapley show different pat-terns.

关键词： quasi-stationary sea surface topography, mean sea surface height, GGM01, fast Fourier transform, spectral analysis

Electron microscopy study of the sakhaite from endogenous borate deposit in Hunan, china

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Science china Earth sciences 2004年第3期47卷 232-238页

作者： LIU Xiangwen1,2. YANG Guangming2. ZOU Huamin3. QU Jing1 & ZHAO Wenxia4.1. graduate {3.,{2. University of Geosciences, Wuhan 4.2}074.{2. 2. Test Center,{2. University of Geosciences, Wuhan 4.2}074.{2. 3. Physics and Technology College, Wuhan University, Wuhan 4.2}072.{2. 4. Test Center, Zhongshan University, Guangzhou 5102.5,{2. china Univ Geosci Grad Sch Wuhan 430074 Peoples R China china Univ Geosci Test Ctr Wuhan 430074 Peoples R China Wuhan Univ Phys & Technol Coll Wuhan 430072 Peoples R China Zhongshan Univ Test Ctr Guangzhou 510275 Peoples R China

Sakhaite specimens from an endogenous borate deposit in Hunan Province, china have been studied in detail by means of transmission electron microscopy (TEM). The selected area electron diffraction (SAED) patterns obtained with different crystal zone axes show that the crystal system is cubic, with a = 1.4.3.nm. The convergent beam electron diffraction (CBED) patterns indicate that the point group and space group of sakhaite is m3. and Fd3., respec-tively. The space group of synthetic sakhaite determined by Chichagov (1974. is F4.3.1} The possible reasons why the space groups of the natural and the synthetic sakhaites are different are discussed.

关键词： sakhaite, space group, convergent beam electron diffraction (CBED).

Formal Verification under Unknown Constraints

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Wuhan University Journal of Natural sciences 2005年第1期10卷 43-46页

作者： LI Guang-hui 1,2.3., LI Xiao-wei 2.3.. {4. of Information Engineering, Zhejiang Forestry College, Hangzhou 3.13.0, Zhejiang,{3. 2. Institute of Computing Technology, Chinese Academy of {2., Beijing 100080,{3. 3. graduate {4. of the Chinese Academy of {2., Beijing 10003.,{3. school of Information Engineering Zhejiang Forestry College Hangzhou 311300 Zhejiang China

We present a formal method of verifying designs with unknown constraints (e.g., black boxes) using Boolean satisfiability (SAT). This method is based on a new encoding scheme of unknown constraints, and solves the corresponding conjunctive normal form (CNF) ***,this method can avoid the potential memory explosion, which the binary decision diagram (BDD) based techniques maybe suffer from, thus it has the capacity of verifying large designs. Experimental results demonstrate the efficiency and feasibility of the proposed method.

关键词： formal verification unknown constraints black box Boolean satisfiability Boolean comparison